SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09399
Pre Gene Modal
BGIBMGA013093
Annotation
PREDICTED:_calcium/calmodulin-dependent_protein_kinase_kinase_2-like?_partial_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.422
 

Sequence

CDS
ATGTGCGCAGGATCAGATGTACGACATTCAGCTGTGGACGTCAGCAATGGCTCCAATAGGGAGTTGGAGAACAACCGATGGCAACCACCGACAACGCATGGACTGTCAGCATATCCAGCCACGGGGGACCGGTCGACGCTGCTCAAGGCACACGCCGCGAAGTCAGCGGAGTGCAGTGGTCAGAGCTCACCGCGACCACGCCGGGCGCCTAGGGAATCTCGTCGCGTTTCCCTCGCCCAAGCCTCTGGATACGTCCAACTCAACCAATACAGACTCCTTGAGCCTATCGGACAGGGCTCGTATGGGATCGTCAAGTTAGCTTACAATGAAGAAGACGACACACATTACGCTATGAAGATCTTGTCTAAAAGGAAGCTCATGCGAAGAGCCGGCTTGTTTGGCAGAACTCCTCCTAGAAGACCAGGACCTGGTCCTCCGCCTGACCCTCTACAGAGGGTTTATAGAGAAATCGCGGTGCTCAAGAAACTAGATCATGCTAATGTTGTGAAATTAGTTGAGGTATTAGACGACCCTGCCGAAGACCAACTCTACCTGGTCTTCCAACTCCTGGAAGGCGGTCCAGTGATAGACATCCCGACAGACAATCCTTTGAAAGAAGACCTGGCCAGGAAGTACTTCAGGGACACTTTACTGGGTGTGGAATATCGTAAGTTACTATAA
Protein
MCAGSDVRHSAVDVSNGSNRELENNRWQPPTTHGLSAYPATGDRSTLLKAHAAKSAECSGQSSPRPRRAPRESRRVSLAQASGYVQLNQYRLLEPIGQGSYGIVKLAYNEEDDTHYAMKILSKRKLMRRAGLFGRTPPRRPGPGPPPDPLQRVYREIAVLKKLDHANVVKLVEVLDDPAEDQLYLVFQLLEGGPVIDIPTDNPLKEDLARKYFRDTLLGVEYRKLL

Summary

Similarity
Belongs to the protein kinase superfamily.
Pfam
PF00069   Pkinase
Interpro
IPR000719   Prot_kinase_dom        + More
IPR017441   Protein_kinase_ATP_BS       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
SUPFAM
SSF56112   SSF56112       
PDB
6CMJ     E-value=1.08991e-40,     Score=416

Ontologies

Topology

Length:
226
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00034
Exp number, first 60 AAs:
0
Total prob of N-in:
0.11069
outside
1  -  226
 
 

Population Genetic Test Statistics

Pi
322.566509
Theta
31.398123
Tajima's D
1.485316
CLR
16.410188
CSRT
0.790210489475526
Interpretation
Uncertain
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