SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09394
Pre Gene Modal
BGIBMGA013094
Annotation
NA
Location in the cell
Extracellular   Reliability : 2.058
 

Sequence

CDS
ATGGCGTTCACACAGCAGATATTGTTGGTGATTATCGGCGTAACCTTTGTTTACTCTGCTCCATTGACTCCGGGGCTTCTTTCCAATGTCCTGAGCAGCCCATTGCCCGTATTGAATAACAAGCCGCTGGATATACTGAATAAACCTTTGGGCATCCTCGGAGACAAACCTGTCAGTGGAGCTCTAAATACTTTAGGTCTTAGAACTGGCCAGTCTGCAGATCATGCCGGGCTGATACCTGGCCTAACTAGCGCCAGTGGTTCACTAGACGACCTGGGATTGAATGATCTGTCGGAAGCTTTGGGACTTAACAGCGGGATCTCATCGCTGCAAGACCCACATCTTCTCTCGAAGCCTTTAAATGCATTGGGTGTATTAAACTCTAAAGGTCAGAAAGTACCAGACGCAATAGGATTGGAACCAAAACCGGGACCTGTTGGTGGAAGCTCCGATGAAAAACCTGCTCTAGGGTTGATTGATCATTCAGATGAATATCATACAGCAGAGCGGTAA
Protein
MAFTQQILLVIIGVTFVYSAPLTPGLLSNVLSSPLPVLNNKPLDILNKPLGILGDKPVSGALNTLGLRTGQSADHAGLIPGLTSASGSLDDLGLNDLSEALGLNSGISSLQDPHLLSKPLNALGVLNSKGQKVPDAIGLEPKPGPVGGSSDEKPALGLIDHSDEYHTAER

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.831887
 
 
Length:
170
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.41734
Exp number, first 60 AAs:
20.41409
Total prob of N-in:
0.94919
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  170
 
 

Population Genetic Test Statistics

Pi
259.939836
Theta
175.666238
Tajima's D
1.582598
CLR
0
CSRT
0.805259737013149
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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