Gene

KWMTBOMO09391  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012762

Annotation

Dynein_light_chain_2?_cytoplasmic_[Papilio_xuthus]

Location

Bomo_Chr16(+):353467-355196      View in EpiBrowser

Full name

Dynein light chain       + More
Dynein light chain 2, cytoplasmic      
Dynein light chain 1, cytoplasmic      

Alternative Name

8 kDa dynein light chain
Cut up protein

Location in the cell

Cytoplasmic   Reliability : 3.052

CDS

ATGTGTGATCGCAAAGCAGTCATAAAGAATGCTGACATGAGCGAAGAGATGCAGCAAGATGCTGTTGACTGTGCAACTCAAGCGCTCGAGAAATTTAACATTGAAAAGGACATAGCTGCATTCATCAAGAAAGAATTTGACAAGAAATACAATCCTACCTGGCATTGCATCGTGGGTCGTAATTTTGGCTCGTATGTGACACACGAGACTCGCCACTTCATCTACTTCTACCTGGGACAGGTGGCTATACTGCTCTTTAAGAGCGGTTAG

Protein

MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG

Description

Acts as a non-catalytic accessory component of a dynein complex.

Subunit

Interacts with spn-F (PubMed:16540510). Forms ternary complexes with spn-F and IKKepsilon (PubMed:26092846, PubMed:26540204).

Similarity

Belongs to the dynein light chain family.

Keywords

Complete proteome   Cytoplasm   Cytoskeleton   Dynein   Microtubule   Motor protein   Reference proteome   3D-structure   Transport  

Feature

chain  Dynein light chain 2, cytoplasmic

Uniprot

A0A2H1VL54   A0A2W1BK22   A0A2A4K8M4   A0A1E1W4D3   A0A194Q0X3   A0A0N1IE32   + More
I4DMP3   A0A3S2LRW0   I4DIV5   H9JTA0   S4NWZ4   A0A212FM74   A0A2A4K873   A0A310SEW8   A0A151X3V7   A0A195CNR1   A0A3L8D785   A0A151IYF6   A0A1B0FF65   A0A154PHP5   F4WE46   A0A195BAE6   M9NDC7   A0A2A3E522   A0A0J7KV35   V9IL27   A0A087ZYC6   A0A151JYV9   A0A1I8P6W3   A0A158NIW8   A0A0L0CKY4   B4ID84   E2A1B0   A0A1L8EI09   A0A026VXQ9   B4Q740   A0A1W4VHV3   B3N8E9   A0A1I8MSB2   B4P3H9   O96860   A0A1L8E4Z4   T1JJG1   A0A411G6Q1   A0A0K8TP62   A0A1W4UGP1   A0A232FLX5   A2I3X5   K7IVZ6   A0A0N0U4A2   E2BNC9   B4I0W2   A0A0Q5TIB9   B4JA80   B4MW35   B4KIJ4   A0A1S3CYJ0   A0A0M4ELD0   B5DN78   A0A0P8XH96   M9NDP1   B4LT36   Q6XHU7   X1WRH5   Q24117   A0A165AIL4   E9H8L6   A0A0L7R0T5   B3MNB8   A0A1D2NCC7   A0A224Y2C9   A0A0P4VS60   A0A0V0G4R7   A0A069DVC3   R4G876   Q6DEU5   A0A1Q3FY20   Q6WMT3   C3XVM4   B4KIJ5   A0A1Q3FXK9   A0A2R7WP69   A0A0D9SC74   U5EUS1   B4LT35   T1DUC3   A0A2M4AMY1   A0A151N501   A0A2M3ZIK2   A0A2J7R8A7   A0A2P8Y1G6   A0A1Q3FY71   A3F596   A0A2M3ZI86   A0A0P4VN39   R4G3Q5   A0A2M4CI80   A0A2M4CI71   D3TR51   A0A2M4CJH8  

Pubmed

28756777    26354079    22651552    19121390    23622113    22118469    + More
30249741    21719571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    21347285    26108605    17994087    20798317    24508170    22936249    18057021    25315136    17550304    26369729    28648823    20075255    15632085    23185243    26109357    26109356    14525923    8628263    16540510    26092846    26540204    21292972    27289101    27129103    26334808    20431018    18563158    22293439    29403074    20353571   

EMBL

ODYU01003156    SOQ41553.1    KZ149997    PZC75389.1    NWSH01000045    PCG80268.1    + More
GDQN01009219    JAT81835.1    KQ459582    KPI98963.1    KQ460635    KPJ13413.1    AK402561    BAM19183.1    RSAL01000280    RVE43050.1    AK401223    BAM17845.1    BABH01004246    GAIX01012362    JAA80198.1    AGBW02007654    OWR54843.1    PCG80269.1    KQ769812    OAD52845.1    KQ982557    KYQ55061.1    KQ977481    KYN02378.1    QOIP01000012    RLU15933.1    KQ980763    KYN13492.1    CCAG010005761    CCAG010005762    KQ434912    KZC11375.1    GL888102    EGI67484.1    KQ976532    KYM81516.1    AE014134    AFH03513.1    KZ288369    PBC26790.1    LBMM01002941    KMQ94156.1    JR053005    AEY61838.1    KQ981463    KYN41505.1    ADTU01000004    JRES01000262    KNC32892.1    CH480829    EDW45510.1    GL435739    EFN72781.1    GFDG01000515    JAV18284.1    KK107599    EZA48593.1    CM000361    CM002910    EDX03331.1    KMY87464.1    CH954177    EDV57336.1    EDV57338.1    CM000157    EDW87246.1    U48847    AY069718    BT088986    GFDF01000284    JAV13800.1    JH431806    MH365793    QBB01602.1    GDAI01001469    JAI16134.1    NNAY01000040    OXU31655.1    EF070478    ABM55544.1    KQ435826    KOX72021.1    GL449409    EFN82799.1    CH480819    EDW53143.1    CH954180    KQS29718.1    CH916368    EDW03754.1    CH963857    CH964239    EDW75905.1    KRF99567.1    CH933807    CH933810    EDW11337.1    KRF94005.1    CP012523    CP012528    ALC37949.1    ALC48208.1    CH379064    EDY72885.1    CH902632    KPU74195.1    AE014298    KX531290    AFH07244.1    ANY27100.1    CH940649    CH940651    EDW63867.1    KRF81323.1    KRF82195.1    AY232086    CM000162    AAR10109.1    EDX01182.1    ABLF02021932    ABLF02021936    ABLF02035613    U32855    U48846    U48848    LRGB01000610    KZS17714.1    GL732605    EFX71839.1    KQ414670    KOC64406.1    CH902620    EDV31075.1    LJIJ01000093    ODN02902.1    GFTR01001196    JAW15230.1    GDKW01000658    JAI55937.1    GECL01003086    JAP03038.1    GBGD01003630    JAC85259.1    ACPB03021739    GAHY01001457    JAA76053.1    AAMC01008472    BC076999    CR761866    AAH76999.1    CAJ82573.1    GFDL01002585    JAV32460.1    AY279514    AAQ83888.1    GG666469    EEN67817.1    EDW11338.1    GFDL01002736    JAV32309.1    KK855201    PTY21413.1    AQIB01027072    GANO01001342    JAB58529.1    EDW63866.1    GAMD01000254    JAB01337.1    GGFK01008786    MBW42107.1    AKHW03004053    KYO31695.1    GGFM01007517    MBW28268.1    NEVH01006723    PNF37067.1    PYGN01001050    PSN38101.1    GFDL01002572    JAV32473.1    EF203468    ABN13588.1    GGFM01007513    MBW28264.1    GDKW01000569    JAI56026.1    ACPB03005078    GAHY01001456    JAA76054.1    GGFL01000869    MBW65047.1    GGFL01000868    MBW65046.1    EZ423903    ADD20179.1    GGFL01000870    MBW65048.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000283053    UP000005204    UP000007151    + More
UP000075809    UP000078542    UP000279307    UP000078492    UP000092444    UP000076502    UP000007755    UP000078540    UP000000803    UP000242457    UP000036403    UP000005203    UP000078541    UP000095300    UP000005205    UP000037069    UP000001292    UP000000311    UP000053097    UP000000304    UP000192221    UP000008711    UP000095301    UP000002282    UP000215335    UP000002358    UP000053105    UP000008237    UP000001070    UP000007798    UP000009192    UP000079169    UP000092553    UP000001819    UP000007801    UP000008792    UP000007819    UP000076858    UP000000305    UP000053825    UP000094527    UP000015103    UP000008143    UP000001554    UP000029965    UP000050525    UP000235965    UP000245037   

PRIDE

H9JTA0    M9NDC7    O96860    M9NDP1    Q24117   

Pfam

PF01221   Dynein_light

Interpro

IPR037177   DLC_sf        + More
IPR001372   Dynein_light_chain_typ-1/2       
IPR019763   Dynein_light_1/2_CS       

SUPFAM

SSF54648   SSF54648       

Gene 3D

3.30.740.10    

ProteinModelPortal

A0A2H1VL54   A0A2W1BK22   A0A2A4K8M4   A0A1E1W4D3   A0A194Q0X3   A0A0N1IE32   + More
I4DMP3   A0A3S2LRW0   I4DIV5   H9JTA0   S4NWZ4   A0A212FM74   A0A2A4K873   A0A310SEW8   A0A151X3V7   A0A195CNR1   A0A3L8D785   A0A151IYF6   A0A1B0FF65   A0A154PHP5   F4WE46   A0A195BAE6   M9NDC7   A0A2A3E522   A0A0J7KV35   V9IL27   A0A087ZYC6   A0A151JYV9   A0A1I8P6W3   A0A158NIW8   A0A0L0CKY4   B4ID84   E2A1B0   A0A1L8EI09   A0A026VXQ9   B4Q740   A0A1W4VHV3   B3N8E9   A0A1I8MSB2   B4P3H9   O96860   A0A1L8E4Z4   T1JJG1   A0A411G6Q1   A0A0K8TP62   A0A1W4UGP1   A0A232FLX5   A2I3X5   K7IVZ6   A0A0N0U4A2   E2BNC9   B4I0W2   A0A0Q5TIB9   B4JA80   B4MW35   B4KIJ4   A0A1S3CYJ0   A0A0M4ELD0   B5DN78   A0A0P8XH96   M9NDP1   B4LT36   Q6XHU7   X1WRH5   Q24117   A0A165AIL4   E9H8L6   A0A0L7R0T5   B3MNB8   A0A1D2NCC7   A0A224Y2C9   A0A0P4VS60   A0A0V0G4R7   A0A069DVC3   R4G876   Q6DEU5   A0A1Q3FY20   Q6WMT3   C3XVM4   B4KIJ5   A0A1Q3FXK9   A0A2R7WP69   A0A0D9SC74   U5EUS1   B4LT35   T1DUC3   A0A2M4AMY1   A0A151N501   A0A2M3ZIK2   A0A2J7R8A7   A0A2P8Y1G6   A0A1Q3FY71   A3F596   A0A2M3ZI86   A0A0P4VN39   R4G3Q5   A0A2M4CI80   A0A2M4CI71   D3TR51   A0A2M4CJH8  

PDB

4QH8     E-value=1.39344e-45,     Score=454

KEGG

101742895    K10418 dynein light chain LC8-type | (RefSeq) dynein light chain 2, cytoplasmic

GO

GO:0007017   GO:0030286   GO:0005874   GO:0003774   GO:0005737   GO:0042623   GO:0007018   GO:0006914   GO:0097718   GO:0008407   GO:0034454   GO:0007476   GO:0035071   GO:0045505   GO:0042803   GO:0048477   GO:1904801   GO:0051017   GO:0007290   GO:0051959   GO:0007291   GO:0005814   GO:0005868   GO:0000132   GO:0032991   GO:0035220   GO:0022416   GO:0007283   GO:2000582   GO:0000776   GO:0072686   GO:0008180   GO:0042326   GO:0005813   GO:0005875   GO:0016849   GO:0004672   GO:0005524   GO:0006468   GO:0006418   GO:0000049   GO:0016876  

PANTHER

PTHR11886  

Subcellular location

  

Length:

89

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.16948

Exp number, first 60 AAs:

0.00897

Total prob of N-in:

0.75461

inside

1  -  89

 

 

Pi

154.475736

Theta

170.543895

Tajima's D

-0.323902

CLR

0

CSRT

0.285235738213089

Interpretation

Uncertain