SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09378
Pre Gene Modal
BGIBMGA013104
Annotation
PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.496
 

Sequence

CDS
ATGGCTACCTGGCGGCTAGTGACGCTGGCGGTCGTGTGCGGAGTGGCTGCAGCAGGCGGACACGTTGACAGACTTGCTACAGATGAGCAGTACGCACAGTTCCCGACACTGTTCCAACTGGACGATTATCATAAGTGTCTGGGGAGGCCTGAGGGTCTGTACTGCGTCGGAACTTTCAACATCAGGCCGCTGCGAAGACCAGACCCTCTCTTTGATATGCTCAAGGATTTCTCCAAAGACACAAGAAATTTCAACCGAACTCGTCTCCACCGCGGGTATTGTGTCAACACGCGGTGTGGTGCTCTACCAGAGACCAACACTACGTTGCGCTTCGAGCGATGCGTGGCGCAGTGGGGCAGGAAGCGCGGCATGCAGCTGTCGCTCCAGCAGCTGCAGTATTGCCGGACGCACGTGCAGGAGAAGGCAGCAAGGTCCGGGCCCCTGCCGCTGGAGACTTCGCACCGGGTGTTCCTGGCAGTGATCGCTGCGATCGTCTTTATGAATTTCATTGGAACTGTATACGATATGTCCACTAAAGATGACGATAAAAAAAGCAAGCTCCTCTCCTCGTGGTCGATCAGATCGAACTGGCAGTACATAGTCGGGCCCTACCCGGACGGTGACCCGCGCCTGGCAGTCCTGCTTCCTGTACAAGCGTTTAGGACAATAATGCTACTTCTAGTGATAATGCTCCACGTTTGTATGATCCACGTCGCTCTGTACATACAGAACCCAGAGTTTATTGAGCGGACGTACCACAAGACAGAAGTAACAATCCTTCGGAACGGATCCTCGTCGGTACAGATGTTCTTTCTACTGTCTTCGTTCCTAATGGCGCAGGGGATCCTACACTCGAAGGAGGAACCAAGCCTTCGGCTGTTCTTCAAGTTGTTGCTTAAGAGGATAGTGAGGATAAGCCCAGTGTATCTGCTAGTGATCGGGTTCGCGAGTACTTGGTGGCCGCTGATGCGCGGAGGACCGCTGTGGCCGGTCGTGGTCGAGGCAGAGAGTGCGGTCTGCCGGCGCAAGTTCTGGGCGCACGCCTTCTTCTACAACAACTTCTTTGACGACAGTAAATACTGTCAAACACAGACTTGGTTCTTGGCAGTGGACATGCAGCTGCACGCGCTGGGGCTGGCGGTGGTGATGTGCACGCGGGGCGCGGGGTGGGGCGCGAGGCGGGGCGTGCTGTGGCTGCTCGGCACCATGTTCCTCGCCTCCTGTCTCCTCAACACCTGGATGGCCTACGTCTCCGAGTGGCAGCCGCTCATGTTCGTCTCGGTACCTGAGAACGTGAGAACAATGTTCAGCGGAGAGCCCACCTTCAGCGAGTACTACACGAAGCCGTGGGGCAGCCTGCCCGCCAGCCTGCTCGGGCTCCTCGTGGCGCATCTACACCACCACCTCTACCAGCGAGGTTTCAAACCAGAAGAACACAAGGTATACTTCGAATTTTGGGTTTCGTAA
Protein
MATWRLVTLAVVCGVAAAGGHVDRLATDEQYAQFPTLFQLDDYHKCLGRPEGLYCVGTFNIRPLRRPDPLFDMLKDFSKDTRNFNRTRLHRGYCVNTRCGALPETNTTLRFERCVAQWGRKRGMQLSLQQLQYCRTHVQEKAARSGPLPLETSHRVFLAVIAAIVFMNFIGTVYDMSTKDDDKKSKLLSSWSIRSNWQYIVGPYPDGDPRLAVLLPVQAFRTIMLLLVIMLHVCMIHVALYIQNPEFIERTYHKTEVTILRNGSSSVQMFFLLSSFLMAQGILHSKEEPSLRLFFKLLLKRIVRISPVYLLVIGFASTWWPLMRGGPLWPVVVEAESAVCRRKFWAHAFFYNNFFDDSKYCQTQTWFLAVDMQLHALGLAVVMCTRGAGWGARRGVLWLLGTMFLASCLLNTWMAYVSEWQPLMFVSVPENVRTMFSGEPTFSEYYTKPWGSLPASLLGLLVAHLHHHLYQRGFKPEEHKVYFEFWVS

Summary

Catalytic Activity
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.
EMBL
BABH01004276    BABH01004277    KZ149997    PZC75398.1    BABH01004270    BABH01004271    + More
NWSH01000045    PCG80259.1    PCG80260.1    ODYU01009435    SOQ53859.1    AGBW02007654    OWR54851.1    NWSH01000169    PCG78819.1    KZ150097    PZC73595.1    ODYU01002360    SOQ39759.1    KQ459582    KPI98971.1    KQ460635    KPJ13420.1    PZC75396.1    PCG80257.1    KPI98970.1    RSAL01000280    RVE43059.1    OWR54850.1    OWR54852.1    KPI98974.1    ODYU01003108    SOQ41449.1    AGBW02012502    OWR44975.1    PZC75399.1    RVE43060.1    AGBW02008687    OWR52781.1    RSAL01000205    RVE44373.1    ODYU01007420    SOQ50171.1    KZ150085    PZC73777.1    KQ461184    KPJ07535.1    KQ459449    KPJ00879.1    SOQ50170.1    NWSH01001667    PCG70472.1    KPJ00872.1    NWSH01001633    PCG70632.1    KPJ07529.1    KZ150068    PZC74095.1    KQ459053    KPJ04119.1    SOQ50174.1    PZC74094.1    KPJ07525.1    KPJ13425.1    KPJ04116.1    ODYU01007576    SOQ50462.1    JX846987    AGG55004.1    KPJ04127.1    KQ461073    KPJ09497.1    SOQ50173.1    AGBW02015045    OWR40663.1    CH478459    EAT32956.1    DS232017    EDS31995.1    ATLV01019431    KE525269    KFB44171.1    KPJ00884.1    CH478446    EAT32977.1    GEZM01042633    JAV79751.1    KPJ04118.1    JXUM01082219    JXUM01082220    JXUM01082221    JXUM01082222    JXUM01082223    JXUM01082224    JXUM01082225    KQ563298    KXJ74104.1    KPJ09500.1    CH902619    EDV36810.2    JTDY01006970    KOB65560.1    GEZM01074205    GEZM01074204    JAV64641.1    CCAG010011641    NEVH01017478    PNF24171.1    ATLV01023205    KE525341    KFB48584.1    CH477771    EAT36390.1    JTDY01004025    KOB68696.1    EDS31990.1    AXCN02000449    GEHC01001380    JAV46265.1    ATLV01023202    ATLV01023203    ATLV01023204    KFB48579.1    CM000071    EDY68727.2    RVE44375.1    AXCM01001275   
Pfam
PF01757   Acyl_transf_3        + More
PF00089   Trypsin
PF02958   EcKinase
PF04488   Gly_transf_sug
PF00632   HECT
PF00397   WW
PF00168   C2
PF03134   TB2_DP1_HVA22
Interpro
IPR002656   Acyl_transf_3        + More
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       
IPR015897   CHK_kinase-like       
IPR007577   GlycoTrfase_DXD_sugar-bd_CS       
IPR000569   HECT_dom       
IPR035983   Hect_E3_ubiquitin_ligase       
IPR035892   C2_domain_sf       
IPR036020   WW_dom_sf       
IPR001202   WW_dom       
IPR000008   C2_dom       
IPR004345   TB2_DP1_HVA22       
SUPFAM
SSF50494   SSF50494        + More
SSF56112   SSF56112       
SSF56204   SSF56204       
SSF51045   SSF51045       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.973168
 
 
Length:
488
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
119.57932
Exp number, first 60 AAs:
3.70914
Total prob of N-in:
0.76215
inside
1  -  155
TMhelix
156  -  178
outside
179  -  219
TMhelix
220  -  242
inside
243  -  300
TMhelix
301  -  323
outside
324  -  359
TMhelix
360  -  382
inside
383  -  394
TMhelix
395  -  417
outside
418  -  488
 
 

Population Genetic Test Statistics

Pi
29.345288
Theta
38.98756
Tajima's D
-1.549418
CLR
0
CSRT
0.0511474426278686
Interpretation
Uncertain
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