SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09374
Pre Gene Modal
BGIBMGA013107
Annotation
PREDICTED:_uncharacterized_protein_LOC101744804_isoform_X1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.828
 

Sequence

CDS
ATGCGCGGGTGGTGGAGCGGCTGGACGAGGTCGCGGGTGCGGTGGCTGGCGGCGCTGGTGTGCTGGGGCGGGCTGGCGGCGCTCGCCCTGCCGCGCCTGCAGCCGCCGCCGCCCGCGCACCGCGCCCGCCCCGCGCCCCCCTCGCGCCTCCTGCTGCAGTCCGAGCCCGCCGCCTCCACGCCGCCCGCCCCCCTCCACGCCCTGCACGCGCTCCCAGCCACCGACACTCGCGTGCTCACCGAGGAGGAGCTGCGGGCCGACGCCGAGCGGCGCCTGCCCTCGCTGCCTCTGGCGTACTGGCACAGGCACAAGGACGACAAGAACAAGTACTACAAGAAGAAGGAGTGCGCGCCCTTCCCCTCCATCTACGACCTCGAGTTCCACAACACCTACTGGCAGACGATGCACTCGAGCGAGGGCGCGTTCCACCTGTACGGCGCGTACATGGACCGGCGCAACACGTCGCGCATCGGGCCCGCCGTGCGCGTGCTCGCCGTGCACGACCGCATCAAGCCCACCATCGCCACGCACTGCCAGCTCTGGTTCGAGGAGCGCGACCAGCCCGTGGTCGTGCGCAACCTCGAGTACAAGTACGTGTGGAACAGCAAGTGGGGTAACTACCGCGACCGCGTGCTGCAGCCGTACCTGCTGGCCTGCGTGCTGCCGGCCGAGGTGCGGGACCTGGTGCCCGCCTCCGTGTCGCTCGTGGAGAACCCCTGCGACCGCGCGACTAACAACCTGCGCGTCCACTACGACGCGCCGCCGACGGGGGGGCGCAAGGAGTTCGCGGTCTGCGTCAAGGGCCTAGACTTCCTGCACGAGGACCTCTCGGTGCGCCTCGTCGAGTGGATCGAGCTCGTGCGCTTGCTCGGGGCCGACAAGATCTTTTTCTATGAGCTTCAGGTCCATCCGAATATCACAAAAGTTCTCGACTACTATGCGAACCTCGGCGCAGTCACGGTGACGCCGATCACTCTGCCCGGAGGCCAACCGAACCTGCCGGGTCTCCAGCACATGTACCTCAAGAAGAAGACGACCCACAAGCGACAGATGGAGTTGATACCGTACAACGATTGCTTGTATCGGCACATGTACGAGTACCGGTGGCTGGCGCTCCTGGACATCGACGAGGTGATCGTGCCGCTGGAGGACGGCGGCTGGAGCGGGCTCATGCGGCGCGCCCTGCCGCTGTCGGCGCCGGCACCGGGCAAGCCGCCGCGCTCCTCGTACCACGCCTCCAACCTGTACTTCCTGGACTCGCTGCGGCACGAGCACGGCTGGGAGGAGGGCGTGCCGCGCTACATGCACATGCTGCAGCACGTGTACCGCACGCGCAACTTCACCAAGCCTGGCCAGTACGTGAAGGCGTTCCACGAGACGGACCGCGTGCTGGCGCTGCACAACCACTTCCCGCTGGCGTGCCTGGGCGGCGCGTGCTCCTCCTACGCGCTGGAGACCAGGCACGCGCGGCTGCAGCACTACCGCGCGGACTGCGTCACGGCGCTCAGCAAGACCTGCGCCGAGCTGAGAGCGCAGCCCGAGCGGGACACCTCGCTGTGGCGTTGGAAAGACGTGCTGGTGGCGCGTGCGGACGAGGCGCTCACCAAGCTTGGCTTCCTGCCGCCACACCGGTGA
Protein
MRGWWSGWTRSRVRWLAALVCWGGLAALALPRLQPPPPAHRARPAPPSRLLLQSEPAASTPPAPLHALHALPATDTRVLTEEELRADAERRLPSLPLAYWHRHKDDKNKYYKKKECAPFPSIYDLEFHNTYWQTMHSSEGAFHLYGAYMDRRNTSRIGPAVRVLAVHDRIKPTIATHCQLWFEERDQPVVVRNLEYKYVWNSKWGNYRDRVLQPYLLACVLPAEVRDLVPASVSLVENPCDRATNNLRVHYDAPPTGGRKEFAVCVKGLDFLHEDLSVRLVEWIELVRLLGADKIFFYELQVHPNITKVLDYYANLGAVTVTPITLPGGQPNLPGLQHMYLKKKTTHKRQMELIPYNDCLYRHMYEYRWLALLDIDEVIVPLEDGGWSGLMRRALPLSAPAPGKPPRSSYHASNLYFLDSLRHEHGWEEGVPRYMHMLQHVYRTRNFTKPGQYVKAFHETDRVLALHNHFPLACLGGACSSYALETRHARLQHYRADCVTALSKTCAELRAQPERDTSLWRWKDVLVARADEALTKLGFLPPHR

Summary

EMBL
BABH01004289    BABH01004290    BABH01004291    KQ460635    KPJ13430.1    KQ459582    + More
KPI98979.1    ODYU01007524    SOQ50373.1    JTDY01001558    KOB73535.1    NWSH01001304    PCG71775.1    GEDC01006340    JAS30958.1    KB632429    ERL95483.1    APGK01054650    APGK01054651    KB741251    ENN71839.1    NEVH01023991    PNF17527.1    GGMR01019404    MBY32023.1    PYGN01000949    PSN39044.1    KQ971345    EFA05385.1    GEZM01102952    GEZM01102951    GEZM01102950    GEZM01102949    JAV51686.1    KK852715    KDR17871.1    ABLF02034075    KQ414616    KOC68468.1    GECZ01030926    GECZ01021700    GECZ01011113    JAS38843.1    JAS48069.1    JAS58656.1    KK107293    QOIP01000005    EZA53321.1    RLU22947.1    GGMS01017079    MBY86282.1    GFDF01001622    JAV12462.1    GL453369    EFN76115.1    KQ434839    KZC08025.1    GFDF01001557    JAV12527.1    GFDF01001558    JAV12526.1    GEBQ01001472    JAT38505.1    ACPB03006498    KQ435847    KOX71126.1    AJWK01010890    GBHO01013850    GDHC01020840    JAG29754.1    JAP97788.1    KZ288186    PBC34765.1    JR049744    AEY61059.1    KQ981264    KYN44002.1    KQ976519    KYM82182.1    ADTU01001324    PYGN01000616    PSN43298.1    GL888217    EGI64706.1    AJVK01012652    KQ769179    OAD52905.1    UFQT01000636    SSX25991.1    KQ980989    KYN10575.1    KQ977726    KYN00304.1    GBBI01002322    JAC16390.1    KK854054    PTY10390.1    KQ983219    KYQ46545.1    GL766836    EFZ14565.1    GL441645    EFN64497.1    JXUM01061675    KQ562163    KXJ76536.1    CH477326    EAT43472.1    DS232148    EDS36083.1    GBYB01013463    GBYB01013465    JAG83230.1    JAG83232.1    GAKP01016933    JAC42019.1    GDHF01027925    GDHF01015659    GDHF01008970    JAI24389.1    JAI36655.1    JAI43344.1    GBXI01015861    JAC98430.1    GGFL01003397    MBW67575.1    ADMH02001382    ETN62692.1    GAMC01018697    GAMC01018696    JAB87859.1    ATLV01004124    KE524190    KFB34982.1    AXCN02000209    KA646529    KA649540    KA649541    AFP61158.1    DS235312    EEB14587.1    KA649542    AFP64171.1    GDRN01052334    JAI66312.1    GDRN01052335    JAI66311.1    APCN01005944    APCN01005945    AAAB01008987    EAA01177.4    CH902632    EDV32653.2    AE014298    AY069777    AY599409    AL132651    AAF45582.1    AAL39922.1    AAT09452.1    AGB94965.1    CAB59574.1    QCYY01002364    ROT70984.1    AGB94964.1    CH480825    EDW43781.1    AXCM01009966    CM000162    EDX00862.2    CH479190    EDW25932.1    CH954183    EDV45435.2    CH933810    EDW07218.2    OUUW01000018    SPP89100.1    CH379063    EAL32530.2    CH916370    EDW00191.1    SPP89099.1   
Pfam
PF01697   Glyco_transf_92
Interpro
IPR008166   Glyco_transf_92       

Ontologies

Topology

Length:
544
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.66952
Exp number, first 60 AAs:
18.58562
Total prob of N-in:
0.94478
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  30
outside
31  -  544
 
 

Population Genetic Test Statistics

Pi
7.184482
Theta
8.892537
Tajima's D
-0.730803
CLR
0
CSRT
0.191490425478726
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号