Gene
KWMTBOMO09368
Pre Gene Modal
BGIBMGA002157
Annotation
PREDICTED:_transcription_factor_GATA-6_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.328
Sequence
CDS
ATGGACAACGTGGGTCAAATAGTGCGAGCGAGCGACGAACGTCGAGAGGAAGAAAACAGCCATGCAGTGGAAGCCTTGCAGCTCGTCAAGAACGAAGAGAGACACGAGAGCGAACAGAACAGCGAGGCCGTCGCCGCCGAGGTCGTGTCTGCCGCCCCCGAGCAGCAGGGCGCCACGCACGAGCACTCGCCGCAGGCACAGTCCGTGATCACGTCGCGGCGCACCGTGCGCACCATCACCGCCGCCGGACACATCACCACTGACGACGCAGGGGACGTCGGACACGACGACGGCGTCAAGGACGAGCCGCCCGAGCACTCCCAGCTGGAACACGAGCAACAGATGCAACAGTACGCGCCCAAGCTGGAGGAGAGCGCAGAAACCAGAGAGCTGCAACAGCAGCATTATGACGAAGAACGGCTGAGGCTAGCAGAAGCAGAGACCGCGAGGTATCTCGCCTTCAAGCAAGAACCCTACAGATCCATGCAGTCACCGATCCCTGTAGATAAACGACTCCCAGTGCAGTATACCCGAGCACCTCAGAGACCCGCTTACGGTCGCGGACTCGCCTTGCGTTACGGAGCGCCCCATCATGTGATCGTATCTCAAGAGGGGGAAGGAGAAGATCCAGCGCATGAGGCCTTTTTGTCTCACAAAGATAAAAACGAACTTCAAGCTTACGCTGCAACCAGTGAAGCTGGCCCCGTAGACGGCCGACAATATGCGGCCGTGCTTGGCGAACAAGTGGCCGCCTCGACCGCACTGGAGATGATCCAAACGACTTCATTAAATAACCAACAGTCGGTCGGCGTGGCGTATCAACAAGTGAAGTACGAAACGCGCGGTGAGCCCGAGCCGCGCCCCACCACGTACGCCAGCTTGCAGCCCGTTACCTCCGTCCACGGAGGATATGCATATGCTGGACAAAGCCCACAGTACGGCGGCACCAGCTACAGTGCTTACGGAGGCAGTAACAAGGAGCTCTTGACGCTGTACGGGGGAGGCTCGGGACCGTCGGCGCCGGCGGGCCGCGGGGACGAGTCGCCGCCGGGACAGCTGCTGTACCGCAGCGACCCGACGCTCTCCTCCTCCTCGCTGACGACGCGCGGTGCTCACGTGGTCTACGGCTCCGTGGTGCCACAGTCACAGACTGTATATGAAGCCCCGCCCAGCCCTAATTCCCAACAAGTAACATTGTATACACACGGCAACACGGTTCAATACAAAGTCGGGGGAGAACACTACCTCGGACAAAGTGGGGGCGTGGAATACGTCCCCGTGTCTGGGTACGAGGGTGGGTTGTTGGTAGAAGGCTACCCGGCCCCGACCCAGGCTTGGCCCGCACATAACTTACTTCCTATTGATGACGGCTTCGATCCTAGCATGGCCGGCATGGGTGAGGTGAAGGAGTGCGTGAACTGCGCGGCCGCGACCACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTTTACACCAGGATCAACGGAGTTAATCGACCGCCTCTCAAAGGCCAAAAAGCGAAGCCACAACAGGCCTTACCGAGCAACGGGAACCGACGCATGGGGGTGACCTGCGCGAACTGCCGCACCACCAACACCACGCTCTGGAGACGGAACAACAACGGCGAGCCGGTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACGTGAACCGGCCCCTCAGCATGAAGAAGGACGGCATTCAGACCCGGAAGCGGAAACCGAAGAGCATGGGCGGCGCACACGGCGGCGTGGCGCGGCCTCCGGGCGGCTCGCTCTCCGGATACCAACGTTAG
Protein
MDNVGQIVRASDERREEENSHAVEALQLVKNEERHESEQNSEAVAAEVVSAAPEQQGATHEHSPQAQSVITSRRTVRTITAAGHITTDDAGDVGHDDGVKDEPPEHSQLEHEQQMQQYAPKLEESAETRELQQQHYDEERLRLAEAETARYLAFKQEPYRSMQSPIPVDKRLPVQYTRAPQRPAYGRGLALRYGAPHHVIVSQEGEGEDPAHEAFLSHKDKNELQAYAATSEAGPVDGRQYAAVLGEQVAASTALEMIQTTSLNNQQSVGVAYQQVKYETRGEPEPRPTTYASLQPVTSVHGGYAYAGQSPQYGGTSYSAYGGSNKELLTLYGGGSGPSAPAGRGDESPPGQLLYRSDPTLSSSSLTTRGAHVVYGSVVPQSQTVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQSGGVEYVPVSGYEGGLLVEGYPAPTQAWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCRTTNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKDGIQTRKRKPKSMGGAHGGVARPPGGSLSGYQR
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00320 GATA
Gene 3D
CDD
ProteinModelPortal
PDB
4HCA
E-value=1.62232e-35,
Score=376
Ontologies
GO
PANTHER
Topology
Subcellular location
Nucleus
Length:
606
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00093
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00142
outside
1 - 606
Population Genetic Test Statistics
Pi
184.1245
Theta
162.502764
Tajima's D
0.104962
CLR
0.658837
CSRT
0.3994800259987
Interpretation
Possibly Positive selection
