Gene

KWMTBOMO09361  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002188

Annotation

dnaJ_homolog_subfamily_C_member_3_[Bombyx_mori]

Location

Bomo_Chr15(+):18107895-18114839      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.1

CDS

ATGGACTACTTGGCGAGTATCAGCTGGAATAAAGTCACTCCCTGCCTTGTGTTTTTAATCTTTGAAGTTGTTTTAGAATTTTCAGAGTGCGCGACGCAGGCGGAGGTCAATAAGCATTTGGAGTTGGGTAGAGACTTCTTGGCTCGAGGACAACTCTCTGACGCTTTGACTCATTATCACGCAGCTGTCGAAGGAGATCCACACAACTATCTTACATACTTCAAGAGAGGTACAGTGTATTATGCCCTCGGAAAAGCAAAATTCGCACTTCAAGACTTTTCAAAGGTGCTAGAGCTGAAATCTGACTTCACATCAGCGAGACTACAGCGAGCGAATGTCTACCTCAAATTAGCACAATATACTGATGCCAAAAATGATTATTTAGAAGTCACATATGCGGATCCGTACAACGAAGAAGCAATCAATCAGTACCACAGGATAGACGAGTACATAGACGATCTGCGGCTGGTGGAGGCGTACTACCGCGGGGGAGACCACCGCGCCGCCGTGGAGCTGGCCACCCGCCTGCTCGACGTGTCCCCCTGGAGCGCACACTTGCGGCAGCTGCGGGCAGAGTCCTACGTGGCTTTGAATGATTTATTTTCGGCCGTGTCAGACATAAGATCAGTAAATAGATTACAGCAAGACTCTACTGATGGATATTACCGGCTCGCTACCTTGTTGTACAAATTGGGACATGTCAGTGACGCGCTCAAAGAAATCAGAGAATGTCTAAAATTAGATCCGGAGCACAAGAAATGTTTTCCGTTTTACAAGAAGGTGAAAAAAGTGGACAAACTTCTCCAGGAGTGTGAAGACAAGAGTTCAGCGAGAGATTTTGCAGGATGCATGAAGAGTGCTTCCGCTGTCCTGCTCGTAGAGACAGAAGTCACTCTGGTGATCTTCGAGGCCCGAAGGTGGCTCTGCTCTTGTGCGGTGAAGGAGGAGCTGTACTCGGAGGCGCTGGGGCACTGCAGCAGCGCGCTGGAGCTGCGCCGCGACGCGCGACTGCTGTGCGACCGCGCCGACGCGCTGCTCGGACTCGAGATGTACGACGACGCTATCCGCGCGTACAAGGAGGCTTTGGAGTTAGATGAAGGGTTTCAGCGAGCGAAGGAAGGTCTCAGCCGAGCACAGAAACTGCAGAAACAATCCGAACAAAGAGATTATTACAAAATCCTGGGCGTCAAGAGGACGGCGACGAAACAAGAGATCATCAAGGCGTACAGGAAGGCGGCGCAGAAGTGGCACCCGGACAGCTACCACGGGGACGAGAAGAAGTTGGCCGAGAAGAAGTTCATCGACATCGCCGCCGCTAAAGAGGTGCTGACGGACCCCGAGAAGCGCGCGCAGTTCGACGGTGGCTCGGACCCGCTGGACCCCGACGCGCAGCGACACGACGCCTTCCACTCGCCCTTCCACCACTTCCAGCACGGCAGCCCCTTCCAGTTCAAGTTCCACTTCAACTAA

Protein

MDYLASISWNKVTPCLVFLIFEVVLEFSECATQAEVNKHLELGRDFLARGQLSDALTHYHAAVEGDPHNYLTYFKRGTVYYALGKAKFALQDFSKVLELKSDFTSARLQRANVYLKLAQYTDAKNDYLEVTYADPYNEEAINQYHRIDEYIDDLRLVEAYYRGGDHRAAVELATRLLDVSPWSAHLRQLRAESYVALNDLFSAVSDIRSVNRLQQDSTDGYYRLATLLYKLGHVSDALKEIRECLKLDPEHKKCFPFYKKVKKVDKLLQECEDKSSARDFAGCMKSASAVLLVETEVTLVIFEARRWLCSCAVKEELYSEALGHCSSALELRRDARLLCDRADALLGLEMYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTATKQEIIKAYRKAAQKWHPDSYHGDEKKLAEKKFIDIAAAKEVLTDPEKRAQFDGGSDPLDPDAQRHDAFHSPFHHFQHGSPFQFKFHFN

Uniprot

H6VTR0   H9IY55   A0A0L7LNN9   A0A194Q0N7   A0A2W1BTF4   A0A2H1WBF0   + More
A0A0N1INS1   A0A212FKF5   A0A1L8E2Y4   A0A1B0EZI8   A0A182HAT5   A0A0L0BWH9   A0A1S4EWW8   A0A0A1XR67   Q17N59   A0A067QQM7   W8BEM7   A0A0K8VQI9   A0A182MCG3   A0A1I8Q558   B0XKA0   T1P8U1   A0A2M4BL85   A0A1Q3FDJ4   A0A2M4BLD4   A0A182F7D3   A0A2M3Z3X5   A0A1I8MLW6   A0A2M3Z3T1   B0XEI0   A0A2M4CZ83   A0A2M4D0J2   A0A2M3Z3Z0   A0A1Y9HEL3   A0A2M4CZB1   A0A084VTB5   U5ET46   B4NK60   A0A2M4A1Z8   A0A2C9GR27   A0A182TF41   A0A182LE00   Q7QCQ0   A0A2J7R5W8   A0A182UQM8   A0A182Y3W8   A0A1B0A8M3   B3M2H0   A0A182P514   A0A1B0G9J5   A0A1A9UNE3   A0A182NQH3   A0A1A9Y6E9   A0A1B0BKL7   A0A195C904   Q296D9   B4GFA7   B4QWJ4   A0A182QZC7   A0A3B0JQE1   A0A151X5M0   A0A182VZQ7   A0A151K0K3   A0A195BUW0   A0A158NVM0   A0A195E3B3   A0A1W4W0G6   D7EL36   B4M4C2   A0A182J5W9   A0A182XIV1   A0A1A9WRY1   A0A182K1I7   B4PUR7   B4HJX1   B4JFD5   F4WGY0   Q9VHA8   A0A1Y1MRS2   A0A1J1IG83   E9IP04   B4K669   A0A0T6B490   A0A026W5Q8   N6T1I4   A0A3L8D3D2   A0A0M4EMW0   A0A154NZX8   E2BUZ4   A0A1W4WIF7   B3NZP0   A0A437BXX6   W5JF77   A0A088ABL3   A0A0J7P4F1   A0A0L7QZF6   A0A2A3E8Y0   A0A2K8JMI3   E2A9X9   A0A0A9YQS7  

Pubmed

26434795    19121390    26227816    26354079    28756777    22118469    + More
26483478    26108605    25830018    17510324    24845553    24495485    25315136    24438588    17994087    20966253    12364791    14747013    17210077    25244985    15632085    21347285    18362917    19820115    17550304    21719571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28004739    21282665    24508170    23537049    30249741    20798317    20920257    23761445    25401762    26823975   

EMBL

JN872895    AFC01234.1    BABH01029836    JTDY01000466    KOB77050.1    KQ459581    + More
KPI99147.1    KZ149955    PZC76487.1    ODYU01007522    SOQ50367.1    KQ461033    KPJ09977.1    AGBW02008061    OWR54218.1    GFDF01001068    JAV13016.1    AJWK01022493    AJWK01022494    JXUM01006485    KQ560216    KXJ83782.1    JRES01001243    KNC24375.1    GBXI01000835    JAD13457.1    CH477202    EAT48083.1    KK853083    KDR11641.1    GAMC01006800    GAMC01006799    JAB99755.1    GDHF01011172    JAI41142.1    AXCM01000804    DS233757    EDS31480.1    KA644550    AFP59179.1    GGFJ01004674    MBW53815.1    GFDL01009412    JAV25633.1    GGFJ01004673    MBW53814.1    GGFM01002465    MBW23216.1    GGFM01002430    MBW23181.1    DS232833    EDS26007.1    GGFL01006439    MBW70617.1    GGFL01006440    MBW70618.1    GGFM01002490    MBW23241.1    GGFL01006441    MBW70619.1    ATLV01016288    KE525074    KFB41209.1    GANO01002092    JAB57779.1    CH964272    EDW85102.1    GGFK01001492    MBW34813.1    APCN01000241    AAAB01008859    EAA07879.2    NEVH01006987    PNF36229.1    CH902617    EDV43423.1    CCAG010015406    JXJN01015975    KQ978072    KYM97307.1    CM000070    EAL28519.1    CH479182    EDW34292.1    CM000364    EDX13598.1    AXCN02001532    OUUW01000008    SPP84345.1    KQ982515    KYQ55579.1    KQ981248    KYN44229.1    KQ976409    KYM90981.1    ADTU01027275    KQ979701    KYN19633.1    KQ973192    EFA11836.2    CH940652    EDW59483.1    CM000160    EDW96684.1    CH480815    EDW42855.1    CH916369    EDV93416.1    GL888148    EGI66459.1    AE014297    AY058567    AAF54411.1    AAL13796.1    GEZM01023412    JAV88402.1    CVRI01000048    CRK98778.1    GL764397    EFZ17706.1    CH933806    EDW14119.1    LJIG01009937    KRT82081.1    KK107429    EZA50946.1    APGK01047844    KB741091    KB632368    ENN73929.1    ERL93679.1    QOIP01000014    RLU15017.1    CP012526    ALC45876.1    KQ434786    KZC05225.1    GL450776    EFN80474.1    CH954181    EDV49750.1    RSAL01000001    RVE55346.1    ADMH02001371    ETN62741.1    LBMM01000135    KMR04809.1    KQ414681    KOC63922.1    KZ288347    PBC27521.1    KY031133    ATU82884.1    GL437987    EFN69747.1    GBHO01008197    GBRD01002220    GDHC01011818    JAG35407.1    JAG63601.1    JAQ06811.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000007151    UP000092461    + More
UP000069940    UP000249989    UP000037069    UP000008820    UP000027135    UP000075883    UP000095300    UP000002320    UP000069272    UP000095301    UP000075900    UP000030765    UP000007798    UP000075840    UP000075902    UP000075882    UP000007062    UP000235965    UP000075903    UP000076408    UP000092445    UP000007801    UP000075885    UP000092444    UP000078200    UP000075884    UP000092443    UP000092460    UP000078542    UP000001819    UP000008744    UP000000304    UP000075886    UP000268350    UP000075809    UP000075920    UP000078541    UP000078540    UP000005205    UP000078492    UP000192221    UP000007266    UP000008792    UP000075880    UP000076407    UP000091820    UP000075881    UP000002282    UP000001292    UP000001070    UP000007755    UP000000803    UP000183832    UP000009192    UP000053097    UP000019118    UP000030742    UP000279307    UP000092553    UP000076502    UP000008237    UP000192223    UP000008711    UP000283053    UP000000673    UP000005203    UP000036403    UP000053825    UP000242457    UP000000311   

PRIDE

H6VTR0    H9IY55    Q9VHA8   

Pfam

PF13181   TPR_8        + More
PF00226   DnaJ
PF07719   TPR_2
PF13176   TPR_7
PF00515   TPR_1

Interpro

IPR013026   TPR-contain_dom        + More
IPR019734   TPR_repeat       
IPR036869   J_dom_sf       
IPR011990   TPR-like_helical_dom_sf       
IPR013105   TPR_2       
IPR001623   DnaJ_domain       
IPR001440   TPR_1       
IPR032675   LRR_dom_sf       

SUPFAM

SSF48452   SSF48452        + More
SSF46565   SSF46565       

Gene 3D

1.10.287.110     1.25.40.10     3.80.10.10    

CDD

cd06257  DnaJ

ProteinModelPortal

H6VTR0   H9IY55   A0A0L7LNN9   A0A194Q0N7   A0A2W1BTF4   A0A2H1WBF0   + More
A0A0N1INS1   A0A212FKF5   A0A1L8E2Y4   A0A1B0EZI8   A0A182HAT5   A0A0L0BWH9   A0A1S4EWW8   A0A0A1XR67   Q17N59   A0A067QQM7   W8BEM7   A0A0K8VQI9   A0A182MCG3   A0A1I8Q558   B0XKA0   T1P8U1   A0A2M4BL85   A0A1Q3FDJ4   A0A2M4BLD4   A0A182F7D3   A0A2M3Z3X5   A0A1I8MLW6   A0A2M3Z3T1   B0XEI0   A0A2M4CZ83   A0A2M4D0J2   A0A2M3Z3Z0   A0A1Y9HEL3   A0A2M4CZB1   A0A084VTB5   U5ET46   B4NK60   A0A2M4A1Z8   A0A2C9GR27   A0A182TF41   A0A182LE00   Q7QCQ0   A0A2J7R5W8   A0A182UQM8   A0A182Y3W8   A0A1B0A8M3   B3M2H0   A0A182P514   A0A1B0G9J5   A0A1A9UNE3   A0A182NQH3   A0A1A9Y6E9   A0A1B0BKL7   A0A195C904   Q296D9   B4GFA7   B4QWJ4   A0A182QZC7   A0A3B0JQE1   A0A151X5M0   A0A182VZQ7   A0A151K0K3   A0A195BUW0   A0A158NVM0   A0A195E3B3   A0A1W4W0G6   D7EL36   B4M4C2   A0A182J5W9   A0A182XIV1   A0A1A9WRY1   A0A182K1I7   B4PUR7   B4HJX1   B4JFD5   F4WGY0   Q9VHA8   A0A1Y1MRS2   A0A1J1IG83   E9IP04   B4K669   A0A0T6B490   A0A026W5Q8   N6T1I4   A0A3L8D3D2   A0A0M4EMW0   A0A154NZX8   E2BUZ4   A0A1W4WIF7   B3NZP0   A0A437BXX6   W5JF77   A0A088ABL3   A0A0J7P4F1   A0A0L7QZF6   A0A2A3E8Y0   A0A2K8JMI3   E2A9X9   A0A0A9YQS7  

PDB

2Y4U     E-value=7.61358e-79,     Score=749

KEGG

101737435    K09523 DnaJ homolog subfamily C member 3 | (RefSeq) DnaJ-20; dnaJ homolog subfamily C member 3

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0016301   GO:0005737   GO:0016021   GO:0034975   GO:0051787   GO:0051087   GO:0051082   GO:0005783   GO:0012505   GO:0005515   GO:0005622   GO:0005840   GO:0006412   GO:0005200   GO:0003676   GO:0004812   GO:0006418   GO:0000049   GO:0016876  

Length:

489

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.598879999999999

Exp number, first 60 AAs:

0.59739

Total prob of N-in:

0.03278

outside

1  -  489

 

 

Pi

217.586577

Theta

233.408719

Tajima's D

-2.247282

CLR

191.680905

CSRT

0.00474976251187441

Interpretation

Possibly Positive selection