Gene

KWMTBOMO09360  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002164

Annotation

ribosomal_protein_L35A_[Bombyx_mori]

Location

Bomo_Chr15(-):18103520-18106534      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.742 Nuclear   Reliability : 2.114

CDS

ATGGCAGACGCTGCGCCGTCCACTGCGCCTAAGGCGAAAACGCCTAAAACTAAGGCACCCAAAGAAAAAGTGGCCAAGGCTGCTCCAGCAGCTCCTGTGGAGCCCACAAAGGTCCTTCGCAAAGCATCAAAGCCCCGCCACGGCAGGCTGTACGCAAAGGCCGTATTCACAGGATATAAGCGTGGTCTACGCAACCAGCACGAGAACACCGCTCTCCTCAAGGTTGAAGGAGCAAAAGACCGTAATGATGCAGTCTTTTATGCTGGCAAGCATTGCGTCTATGTGTACAGAGCTAAGAAGAGGACACCAATTCCCGGAGGTCCCCGTGGCAAAAAAACCAAGCTGCGTGCTATCTGGGGCAAGGTGACCCGCCCACATGGCAACTCTGGCAGTGTCCGAGCCAAGTTCAAGTCTAACCTCCCTGCCCAGGCTATGGGACACAGAATACGAGTGATGCTGTATCCTTCCAGGATCTAA

Protein

MADAAPSTAPKAKTPKTKAPKEKVAKAAPAAPVEPTKVLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI

Uniprot

Q5UAQ3   D1LYM8   G0ZEF2   E7DZ34   A0A3G1T1M3   A0A1E1WEZ5   + More
A0A1E1W7W9   A0A437BY13   Q962S9   A0A2W1BV08   I4DIS5   I4DM77   S4P171   A0A194Q0R4   A0A0L7K5P8   A0A2A3E856   V9IJU0   A0A087ZV22   A0A1Y1K4X3   A0A2P8YH39   V5I836   A0A1W4WIE6   A0A158NAY6   D7EL35   A0A0C9RKS3   Q4GXA3   K7IUN9   A0A026W195   E2BMQ0   E0VZL5   D1M813   A0A1B6EGM7   Q4GXA2   I3VPC8   A0A1B6F8N8   A0A069DNJ9   A0A1B6H6N0   A0A154PQB9   A0A0P4VRU4   R4G4N0   A0A067QNN7   A0A1B6KE43   A0A1B6M662   A0A0X7YAU2   E2A702   A0A195FVF0   A0A151JCA3   A0A2J7R1P0   A0A151X2G9   F4WC07   A0A151I3B3   E9IR13   A0A3L8DNX7   A0A0U2KDR9   A0A1B6DKV1   G3CJQ0   A0A2H8TWQ0   A0A0J7L2H9   U5EVE0   A0A151I8F0   C4WTL3   A0A1S6GLD0   A0A1Q3EU82   A0A267E1C4   A0A267EE04   T1DJ51   Q56FD4   C3ZFA2   Q4GXA1   A0A232EQ58   A0A194AQ16   A0A2M3ZZ97   A0A182F7D4   C6ZQW7   A0A2M3ZZ86   A0A1D1YIW6   A0A2M3ZFH1   W5JEF9   Q5QBI1   C1BVB7   T1DIV5   A0A023EHM0   A0A182G9G3   A0A1A9X202   Q17N60   Q6XI31   Q6XIN8   A0A1A9YFH2   B4KD99   B4NF50   A0A1S6GLF9   B4LZC4   A8CWA1   A0A0K8TQV6   A0A182K1I9   Q9VNB9   A0A182NQH1  

Pubmed

14668217    28756777    22651552    23622113    26354079    26227816    + More
28004739    29403074    21347285    18362917    19820115    20075255    24508170    20798317    20566863    23049752    26334808    27129103    24845553    21719571    21282665    30249741    26621068    21058630    28043022    18563158    28648823    20496585    20920257    23761445    24330624    24945155    26483478    17510324    14525923    17994087    17550304    18194529    26369729    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    23636399    26109357    26109356   

EMBL

AY769305    AAV34847.1    GU084302    ACY95335.1    JF265030    AEL28861.1    + More
HQ424737    ADT80681.1    MG992441    AXY94879.1    GDQN01005528    JAT85526.1    GDQN01008005    JAT83049.1    RSAL01000001    RVE55347.1    AF400197    ODYU01007522    AAK92169.1    SOQ50366.1    KZ149955    PZC76486.1    AK401193    BAM17815.1    AK402395    BAM19017.1    GAIX01009036    JAA83524.1    KQ459581    KPI99146.1    JTDY01010421    KOB58209.1    KZ288331    PBC27895.1    JR049297    AEY60922.1    GEZM01092463    JAV56549.1    PYGN01000600    PSN43543.1    GALX01005370    JAB63096.1    ADTU01010504    ADTU01010505    ADTU01010506    DS497802    EFA11837.1    GBYB01007516    JAG77283.1    AM049120    CAJ17420.1    AAZX01013482    KK107494    EZA49845.1    GL449285    EFN83035.1    DS235853    EEB18821.1    GU120437    ACY71287.1    GEDC01000205    JAS37093.1    AM049121    CAJ17421.1    JW050210    AFK82367.1    GECZ01023315    JAS46454.1    GBGD01003241    JAC85648.1    GECU01037349    JAS70357.1    KQ435007    KZC13448.1    GDKW01001302    JAI55293.1    ACPB03015124    GAHY01001215    JAA76295.1    KK853131    KDR10907.1    GEBQ01030255    JAT09722.1    GEBQ01008586    JAT31391.1    KC507359    AHB12482.1    GL437238    EFN70783.1    KQ981272    KYN43839.1    KQ979060    KYN23175.1    NEVH01008205    PNF34743.1    KQ982577    KYQ54635.1    GL888068    EGI68265.1    KQ976487    KYM83649.1    GL765024    EFZ16990.1    QOIP01000006    RLU22150.1    KT755008    KT755058    ALS04842.1    GEDC01010987    JAS26311.1    HP639817    AEM97954.1    GFXV01005783    MBW17588.1    LBMM01001254    KMQ96639.1    GANO01001071    JAB58800.1    KQ978366    KYM94599.1    ABLF02035338    ABLF02035339    AK340668    BAH71233.1    KY314231    AQS22665.1    GFDL01016182    JAV18863.1    NIVC01002767    PAA55355.1    NIVC01002245    NIVC01002230    PAA59627.1    PAA59793.1    GAMD01001636    JAA99954.1    AY961566    AAX62468.1    GG666612    EEN49408.1    AM049122    CAJ17422.1    NNAY01002819    OXU20505.1    GELH01000406    GELH01000405    JAS03866.1    GGFK01000481    MBW33802.1    EZ114918    ACU30971.1    GGFK01000555    MBW33876.1    GDJX01013371    JAT54565.1    GGFM01006419    MBW27170.1    ADMH02001371    ETN62742.1    AY752830    AAV84243.1    BT078546    BT121093    ACO12970.1    ADD38023.1    GALA01000726    JAA94126.1    JXUM01006485    GAPW01005066    KQ560216    JAC08532.1    KXJ83781.1    JXUM01008221    KQ560256    KXJ83521.1    CH477202    EAT48081.1    EAT48082.1    AY232001    AAR10024.1    AY231792    CM000160    AAR09815.1    EDW95770.1    CH933806    EDW14881.1    CH964251    EDW83425.1    KY314249    AQS22683.1    CH940650    EDW68159.1    AJWK01001113    EU124603    ABV60321.1    GDAI01001313    JAI16290.1    AE014297    AY071136    AY071732    KX531311    AAF52027.1    AAL48758.1    AAL49354.1    ANY27121.1   

Proteomes

UP000283053    UP000053268    UP000037510    UP000242457    UP000005203    UP000245037    + More
UP000192223    UP000005205    UP000007266    UP000002358    UP000053097    UP000008237    UP000009046    UP000076502    UP000015103    UP000027135    UP000000311    UP000078541    UP000078492    UP000235965    UP000075809    UP000007755    UP000078540    UP000279307    UP000036403    UP000078542    UP000007819    UP000215902    UP000001554    UP000215335    UP000069272    UP000000673    UP000069940    UP000249989    UP000091820    UP000008820    UP000002282    UP000092443    UP000009192    UP000007798    UP000008792    UP000092461    UP000075881    UP000000803    UP000075884   

PRIDE

Q5UAQ3    Q9VNB9   

Pfam

PF01247   Ribosomal_L35Ae        + More
PF00622   SPRY

Interpro

IPR018266   Ribosomal_L35Ae_CS        + More
IPR001780   Ribosomal_L35A       
IPR038661   L35A_sf       
IPR009000   Transl_B-barrel_sf       
IPR003877   SPRY_dom       
IPR013320   ConA-like_dom_sf       
IPR035766   SPRYD7       
IPR001870   B30.2/SPRY       

SUPFAM

SSF50447   SSF50447        + More
SSF49899   SSF49899       

Gene 3D

2.40.10.190    

CDD

cd12880  SPRYD7

ProteinModelPortal

Q5UAQ3   D1LYM8   G0ZEF2   E7DZ34   A0A3G1T1M3   A0A1E1WEZ5   + More
A0A1E1W7W9   A0A437BY13   Q962S9   A0A2W1BV08   I4DIS5   I4DM77   S4P171   A0A194Q0R4   A0A0L7K5P8   A0A2A3E856   V9IJU0   A0A087ZV22   A0A1Y1K4X3   A0A2P8YH39   V5I836   A0A1W4WIE6   A0A158NAY6   D7EL35   A0A0C9RKS3   Q4GXA3   K7IUN9   A0A026W195   E2BMQ0   E0VZL5   D1M813   A0A1B6EGM7   Q4GXA2   I3VPC8   A0A1B6F8N8   A0A069DNJ9   A0A1B6H6N0   A0A154PQB9   A0A0P4VRU4   R4G4N0   A0A067QNN7   A0A1B6KE43   A0A1B6M662   A0A0X7YAU2   E2A702   A0A195FVF0   A0A151JCA3   A0A2J7R1P0   A0A151X2G9   F4WC07   A0A151I3B3   E9IR13   A0A3L8DNX7   A0A0U2KDR9   A0A1B6DKV1   G3CJQ0   A0A2H8TWQ0   A0A0J7L2H9   U5EVE0   A0A151I8F0   C4WTL3   A0A1S6GLD0   A0A1Q3EU82   A0A267E1C4   A0A267EE04   T1DJ51   Q56FD4   C3ZFA2   Q4GXA1   A0A232EQ58   A0A194AQ16   A0A2M3ZZ97   A0A182F7D4   C6ZQW7   A0A2M3ZZ86   A0A1D1YIW6   A0A2M3ZFH1   W5JEF9   Q5QBI1   C1BVB7   T1DIV5   A0A023EHM0   A0A182G9G3   A0A1A9X202   Q17N60   Q6XI31   Q6XIN8   A0A1A9YFH2   B4KD99   B4NF50   A0A1S6GLF9   B4LZC4   A8CWA1   A0A0K8TQV6   A0A182K1I9   Q9VNB9   A0A182NQH1  

PDB

4V6W     E-value=4.98061e-34,     Score=356

KEGG

692707    K02917 large subunit ribosomal protein L35Ae | (RefSeq) RpL35A; ribosomal protein L35A

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003735   GO:0006412   GO:0042273   GO:0022625   GO:0002181   GO:0022626   GO:0005622   GO:0005200   GO:0003676   GO:0004812   GO:0006418   GO:0000049   GO:0016876  

PANTHER

PTHR10902   PTHR20951  

Length:

158

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00012

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10544

outside

1  -  158

 

 

Pi

176.288494

Theta

136.373109

Tajima's D

0.099258

CLR

0.805892

CSRT

0.402129893505325

Interpretation

Possibly Positive selection