Silkworm Genome Informatics Database

Gene

KWMTBOMO09357

Pre Gene Modal

BGIBMGA002167

Annotation

Uncharacterized_protein_OBRU01_11272_[Operophtera_brumata]

Location

Bomo_Chr15(-):18001449-18070064 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.517

CDS

ATGAAGCTCTCTGTTACCAACTCCGGCCTCAAAGGATTTACCAAAGAACACGGACTAACCGAGTACTGGTCTCACCGGATCACTTATTGCGCCAGCCCACCCCACTACCCCAAACTCTTCTGCTGGGTCTACCGTCACGAAGGCAAGAAGCTCAAACATGAACTCCGATGCCACGCAGTTTTATGCACCAAAGAATCTATATCTAAAAAGATCACCGAAGAACTGCAGGTCAAGTTGAAGCAAGCATTGGTTGAGTTCAAAAAGGAAAGAATCTCAAAGCAAAACGCAAGGCTGAGTCTTGCGAACAGCGTGTATGACAACCCCAGCATGCCGCGTCGTAAAATACTTTTAAGTGTTGGTTCTATGAACTACAGACCTCCTTTAGAAAGGTCCAAATCAGCTCCGAAGCTTGGAGCGATCGAGGAACTTTGCTCCGAAGAAGACGAGGAGGAGGCCGAGATGAACGCAAGAGCTAACTTGTGTAATGAATGGACGAGATCATCATTCTCCAACGACATGGACAATATGTCGATACAGACACTTGACAGGCGACGGCCGGATGTGAAGAGTCCAAGGAAGATGTCTTGTCCCGAAGGCATCATGAACCGTCTTTTAGCGTCGCCTGGTAGCGAAACTGTTACACTTACAGATGAACTACTCGATTTAATCTCCAAAGAGAGTAATAAAGATGTGGGAACTAGTCATGAAGATGATAAACTTGAAGCAATAGTAGAGACAAACGAAATAATCGATACAGCAGCAGCAAACGTGACAGAATGCAAATTGTCTAGTAACTTCCTCGTCACGGACAGCGACGATGGATCTGTTTCTTCTGGATGCGAGACTGCCAGTACCGCTGCTTCTGACTCCGAACCTACCTCCCTCCCATCGTTACCCCAAGAAGACAAAGTTGCAGAAGAAACCGGTGATAGAATTGGTAATTATTCTAATGAAGTAAATCATGTCCCTATTGGCGAGAAAAACGGGTTCCGACGTAGATCTACGTACCCTCCTCTCAGCGCTAGTATCTTGAGCAACTTTGAAGAGAACTTTGAATCTCTGATTGATAACCTCACTGATGCGGACAGTCTGACTTCTAGCACCGAAACTGAAGTGTTCAAGAGTGTGGGTGACAGCGACAGCGCCTGCAGTGATGAATCAGGCTACTCCGAGTTCTTGGATGGAAAGGAAAGCATTATTGGGAACACTATTATGGTTTAA

Protein

MKLSVTNSGLKGFTKEHGLTEYWSHRITYCASPPHYPKLFCWVYRHEGKKLKHELRCHAVLCTKESISKKITEELQVKLKQALVEFKKERISKQNARLSLANSVYDNPSMPRRKILLSVGSMNYRPPLERSKSAPKLGAIEELCSEEDEEEAEMNARANLCNEWTRSSFSNDMDNMSIQTLDRRRPDVKSPRKMSCPEGIMNRLLASPGSETVTLTDELLDLISKESNKDVGTSHEDDKLEAIVETNEIIDTAAANVTECKLSSNFLVTDSDDGSVSSGCETASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPLSASILSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSACSDESGYSEFLDGKESIIGNTIMV

Uniprot

H9IY34 A0A2A4IZC7 A0A2H1WV66 A0A2W1BXI9 A0A0L7LCM4 A0A437BRF1 + More
A0A194Q2C1 A0A194QMR3 A0A1E1WEN2 A0A212FIA4 A0A0L7KP12

Pubmed

19121390 28756777 26227816 26354079 22118469

EMBL

BABH01029825 NWSH01004876 PCG64624.1 ODYU01011267 SOQ56897.1 KZ149955 + More
PZC76483.1 JTDY01001652 KOB73247.1 RSAL01000016 RVE53022.1 KQ459581 KPI99144.1 KQ461195 KPJ06812.1 GDQN01005677 JAT85377.1 AGBW02008412 OWR53459.1 JTDY01007638 KOB65053.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000283053 UP000053268 UP000053240 + More
UP000007151

PRIDE

H9IY34

Pfam

PF14719 PID_2 + More
PF07679 I-set

Interpro

IPR033930   FAM43A/B_PTB        + More
IPR011993   PH-like_dom_sf
IPR006020   PTB/PI_dom
IPR007110   Ig-like_dom
IPR003599   Ig_sub
IPR013783   Ig-like_fold
IPR036465   vWFA_dom_sf
IPR013098   Ig_I-set
IPR003598   Ig_sub2
IPR036179   Ig-like_dom_sf

SUPFAM

SSF53300 SSF53300 + More
SSF48726 SSF48726

Gene 3D

2.30.29.30 2.60.40.10

CDD

cd01214 PTB_FAM43A

ProteinModelPortal

H9IY34 A0A2A4IZC7 A0A2H1WV66 A0A2W1BXI9 A0A0L7LCM4 A0A437BRF1 + More
A0A194Q2C1 A0A194QMR3 A0A1E1WEN2 A0A212FIA4 A0A0L7KP12

PDB

3SO6 E-value=0.0259799, Score=88

KEGG

101737292 no KO assigned | (RefSeq) uncharacterized LOC101737292

GO

GO:0005515 GO:0016209 GO:0016491 GO:0045454 GO:0005200 GO:0003676 GO:0004812 GO:0006418 GO:0000049 GO:0016876

Length:

406

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00023

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.00455

outside

1 - 406

Pi

266.415071

Theta

185.944034

Tajima's D

1.062308

CLR

0.981286

CSRT

0.674466276686166

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics