Gene

KWMTBOMO09343

Annotation

PREDICTED:_protein_FAM188B2_[Bombyx_mori]

Location

Bomo_Chr15(+):16819720-16823060      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.163

CDS

ATGCCACAATATGGCGTACTCTCCCGGAGTCCGGTTGGCCTCCTCGTTTGGTATGGAGGAGAAGAAAGCTCGAAGGTCAATGTGAACAAGCAATACCCTGGATCCAGATTGAAAACTCCGGCTTTACCTATATGGATCACCAGTTGCTCCGGACACTACGGCGTACTATTTAACACAAACCGTGAACTACTGAGGAATTATCACGCTGAAAGACGTTTCGACATCCACTACTACACATGCGGCGGATGTCATGTCCTCCTCAACGTGGACACGAGAGCCCATGACGACACCACTGCGGCCATGCGGACCGATGACATCACGGCTACACCTCTGGAGAAACTTATCCTTACCAAGTGGCAAGACGCGAAGATCACGTGGACTGGACCCGGCCCGAACTTCAATGAAAGCTCCAAATAA

Protein

MPQYGVLSRSPVGLLVWYGGEESSKVNVNKQYPGSRLKTPALPIWITSCSGHYGVLFNTNRELLRNYHAERRFDIHYYTCGGCHVLLNVDTRAHDDTTAAMRTDDITATPLEKLILTKWQDAKITWTGPGPNFNESSK

Uniprot

A0A2H1WHT1   A0A3S2NCJ4   A0A212FC03   A0A194Q2B2   A0A0N1I6G6   A0A194Q1D4   + More
A0A2P8XFB1   A0A2J7QLE7   A0A067RE78   K7JAC7   A0A182JC61   A0A182YKF0   A0A195C4H5   A0A182VX87   A0A182KBH0   A0A182RHZ9   A0A182MM88   A0A158NIU4   A0A182HT52   A0A195ETM7   A0A026WRI0   W5JWR3   A0A3L8DEI6   E2A6H8   E2C1G3   A0A182NA51   B0WRU5   A0A232F0P7   A0A084VSF5   A0A182U4D1   A0A182P721   A0A182USY5   A0A182XI67   A0A182LF90   Q7QC29   A0A182QRZ0   A0A0M8ZYI6   A0A0L7QN16   A0A310SE75   A0A1S4FHJ5   Q170T6   A0A1B6MEI4   A0A182GM75   A0A088ANY6   A0A195B6G2   A0A1J1IHT9   A0A195EL76   A0A1B6JBP8   A0A1B6CE23   A0A336LEZ3   A0A1I8MHU0   A0A2S2Q673   T1HUF4   E0VC02   A0A336MUE9   X1WII0   A0A1I8Q565   A0A2H8TWE3   A0A2H8TU45   A0A034V366   A0A0L0C0H3   Q1EC94   A0A1B0A2I0   D9PTR5   A0A0M4EGV3   A0A1A9W4M4   A0A1B0B1A0   B4N5D1   A0A1W4VTH7   A0A1A9YEL8   A0A1B0G276   A0A0J9UJ22   B4HEB3   B4LC60   A0A1A9VMY8   Q9VTG6   B3NGS9   B4PF17   T1GE37   B3M3X9   B4J2W1   B4L186   Q2LZ39   A0A3B0JWE8   W8C8F7   B4QPR3   T1IVG0   A0A2R7VWA4   A0A0P5XK46   E9GEP2   A0A0N8BV61   A0A164YF92   A0A0P5XK15   A0A0P6JVM6   A0A0P6AI06   A0A0P4X4M8  

Pubmed

22118469    26354079    29403074    24845553    20075255    25244985    + More
21347285    24508170    20920257    23761445    30249741    20798317    28648823    24438588    20966253    12364791    14747013    17210077    17510324    26483478    25315136    20566863    25348373    26108605    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    15632085    24495485    21292972   

EMBL

ODYU01008733    SOQ52587.1    RSAL01000099    RVE47585.1    AGBW02009251    OWR51253.1    + More
KQ459581    KPI99134.1    KQ461187    KPJ07359.1    KPI99133.1    PYGN01002360    PSN30665.1    NEVH01013247    PNF29415.1    KK852521    KDR22141.1    AAZX01000433    KQ978292    KYM95510.1    AXCM01010769    AXCM01010770    ADTU01001835    ADTU01001836    APCN01000416    KQ981979    KYN31262.1    KK107119    EZA58578.1    ADMH02000178    ETN67484.1    QOIP01000009    RLU18592.1    GL437132    EFN70935.1    GL451937    EFN78139.1    DS232059    EDS33504.1    NNAY01001365    OXU24231.1    ATLV01015933    KE525044    KFB40899.1    AAAB01008859    EAA07512.5    AXCN02000214    KQ435796    KOX73537.1    KQ414860    KOC60047.1    KQ770827    OAD52575.1    CH477468    EAT40470.1    GEBQ01005646    JAT34331.1    JXUM01014019    JXUM01014020    JXUM01044547    JXUM01044548    JXUM01044549    KQ561405    KQ560391    KXJ78685.1    KXJ82665.1    KQ976582    KYM79845.1    CVRI01000050    CRK99330.1    KQ978739    KYN28881.1    GECU01011102    JAS96604.1    GEDC01025647    JAS11651.1    UFQS01003116    UFQT01003116    SSX15231.1    SSX34606.1    GGMS01003888    MBY73091.1    ACPB03005515    DS235044    EEB10908.1    UFQS01002883    UFQT01002883    SSX14824.1    SSX34214.1    ABLF02036197    ABLF02036201    ABLF02036203    ABLF02036204    ABLF02036207    ABLF02036210    ABLF02036216    GFXV01006789    MBW18594.1    GFXV01005978    MBW17783.1    GAKP01021256    JAC37696.1    JRES01001072    KNC25756.1    BT025840    ABF85740.1    BT125072    ADK94000.1    CP012525    ALC43715.1    JXJN01007034    CH964101    EDW79570.1    CCAG010006678    CM002912    KMY98950.1    CH480815    EDW41067.1    CH940647    EDW70888.1    AE014296    AAF50083.2    CH954178    EDV51386.1    CM000159    EDW94099.1    CAQQ02002878    CAQQ02002879    CAQQ02002880    CAQQ02002881    CH902618    EDV39313.1    CH916366    EDV97131.1    CH933809    EDW19268.1    CH379069    EAL29670.3    OUUW01000002    SPP77041.1    GAMC01003069    JAC03487.1    CM000363    EDX10054.1    JH431584    KK854129    PTY11787.1    GDIP01070932    JAM32783.1    GL732541    EFX82046.1    GDIQ01141771    JAL09955.1    LRGB01000915    KZS15191.1    GDIP01070933    JAM32782.1    GDIQ01007015    JAN87722.1    GDIP01029004    JAM74711.1    GDIP01246407    JAI76994.1   

Proteomes

UP000283053    UP000007151    UP000053268    UP000053240    UP000245037    UP000235965    + More
UP000027135    UP000002358    UP000075880    UP000076408    UP000078542    UP000075920    UP000075881    UP000075900    UP000075883    UP000005205    UP000075840    UP000078541    UP000053097    UP000000673    UP000279307    UP000000311    UP000008237    UP000075884    UP000002320    UP000215335    UP000030765    UP000075902    UP000075885    UP000075903    UP000076407    UP000075882    UP000007062    UP000075886    UP000053105    UP000053825    UP000008820    UP000069940    UP000249989    UP000005203    UP000078540    UP000183832    UP000078492    UP000095301    UP000015103    UP000009046    UP000007819    UP000095300    UP000037069    UP000092445    UP000092553    UP000091820    UP000092460    UP000007798    UP000192221    UP000092443    UP000092444    UP000001292    UP000008792    UP000078200    UP000000803    UP000008711    UP000002282    UP000015102    UP000007801    UP000001070    UP000009192    UP000001819    UP000268350    UP000000304    UP000000305    UP000076858   

PRIDE

Q1EC94    Q9VTG6   

Pfam

PF13898   DUF4205        + More
PF04922   DIE2_ALG10
PF00334   NDK
PF08614   ATG16
PF00400   WD40

Interpro

IPR025257   DUF4205        + More
IPR039785   MINY3/4       
IPR016900   Alg10       
IPR017986   WD40_repeat_dom       
IPR036850   NDK-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR006602   Uncharacterised_DM10       
IPR013923   Autophagy-rel_prot_16       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR034907   NDK-like_dom       
IPR019775   WD40_repeat_CS       
IPR037993   NDPk7B       
IPR020472   G-protein_beta_WD-40_rep       

SUPFAM

SSF50978   SSF50978        + More
SSF54919   SSF54919       

Gene 3D

2.130.10.10     3.30.70.141    

CDD

cd04412  NDPk7B

ProteinModelPortal

A0A2H1WHT1   A0A3S2NCJ4   A0A212FC03   A0A194Q2B2   A0A0N1I6G6   A0A194Q1D4   + More
A0A2P8XFB1   A0A2J7QLE7   A0A067RE78   K7JAC7   A0A182JC61   A0A182YKF0   A0A195C4H5   A0A182VX87   A0A182KBH0   A0A182RHZ9   A0A182MM88   A0A158NIU4   A0A182HT52   A0A195ETM7   A0A026WRI0   W5JWR3   A0A3L8DEI6   E2A6H8   E2C1G3   A0A182NA51   B0WRU5   A0A232F0P7   A0A084VSF5   A0A182U4D1   A0A182P721   A0A182USY5   A0A182XI67   A0A182LF90   Q7QC29   A0A182QRZ0   A0A0M8ZYI6   A0A0L7QN16   A0A310SE75   A0A1S4FHJ5   Q170T6   A0A1B6MEI4   A0A182GM75   A0A088ANY6   A0A195B6G2   A0A1J1IHT9   A0A195EL76   A0A1B6JBP8   A0A1B6CE23   A0A336LEZ3   A0A1I8MHU0   A0A2S2Q673   T1HUF4   E0VC02   A0A336MUE9   X1WII0   A0A1I8Q565   A0A2H8TWE3   A0A2H8TU45   A0A034V366   A0A0L0C0H3   Q1EC94   A0A1B0A2I0   D9PTR5   A0A0M4EGV3   A0A1A9W4M4   A0A1B0B1A0   B4N5D1   A0A1W4VTH7   A0A1A9YEL8   A0A1B0G276   A0A0J9UJ22   B4HEB3   B4LC60   A0A1A9VMY8   Q9VTG6   B3NGS9   B4PF17   T1GE37   B3M3X9   B4J2W1   B4L186   Q2LZ39   A0A3B0JWE8   W8C8F7   B4QPR3   T1IVG0   A0A2R7VWA4   A0A0P5XK46   E9GEP2   A0A0N8BV61   A0A164YF92   A0A0P5XK15   A0A0P6JVM6   A0A0P6AI06   A0A0P4X4M8  

KEGG

101738732    K22647 ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12] | (RefSeq) protein FAM188B2

GO

GO:0016787   GO:0016807   GO:1990380   GO:0004583   GO:0006488   GO:0005789   GO:0016021  

PANTHER

PTHR12473  

Length:

138

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.82304

Exp number, first 60 AAs:

0.79861

Total prob of N-in:

0.10826

outside

1  -  138

 

 

Pi

14.839925

Theta

18.069879

Tajima's D

-0.550538

CLR

1.158526

CSRT

0.231238438078096

Interpretation

Uncertain