SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09333
Pre Gene Modal
BGIBMGA002175
Annotation
cuticular_protein_glycine-rich_16_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.87
 

Sequence

CDS
ATGTATAATTTATCTTTTCAGATTACTTGCTCTATTTTGGCTGTACTTGCAGTAGCACAAGCCTTCCCTCATGGCAGTAGCGATGTTGATGGAAGCGGTGAAGTCGAAGCTGTAGCAGGAACTCTAAAAAAAGGCTTTGGTTTTGGAGGATACGACAATTCTGGTTTTGGTCATAGCGGCTTCGGCAGTTTTGGTCATGATTCCGGATTTGGCGGCTTTGGAAATCGCAACCCTGGATTCGATAGTTTCGGTCGTGACTCTGGGTTCGGTGGCTTTGGACGTGACTCCGGATTCGGAAGCTTCGGACACGATTCTGGATTTGGACACCACGACTCTGGATTCGGTAGCTTCGGGCATGACTCCGGATTTGGACACCATGACTCCGGATTTGGACACCATGATTCCGGATTTGGACACCATGACTCCGGATTTGGACACCACGACTCCGGATTCGGTAGCTTTGGTGACTCCGCGCTCGACAGTTTTGGCAAAGACAATGCCGGACACGTAAAGGATATTTCCAGTTTAGCAGACCATGGTATAGACGAAGATAAAATCGAAAAGGGCCTTGAAGGCATTGCCACTTCATTGGGTGGTATCGGCACTGCCATTGGTGGTGCCCTCACCTCAAATATCGCAAATGGCCTCAGACACTGA
Protein
MYNLSFQITCSILAVLAVAQAFPHGSSDVDGSGEVEAVAGTLKKGFGFGGYDNSGFGHSGFGSFGHDSGFGGFGNRNPGFDSFGRDSGFGGFGRDSGFGSFGHDSGFGHHDSGFGSFGHDSGFGHHDSGFGHHDSGFGHHDSGFGHHDSGFGSFGDSALDSFGKDNAGHVKDISSLADHGIDEDKIEKGLEGIATSLGGIGTAIGGALTSNIANGLRH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.993087
 
 
Length:
218
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.74138
Exp number, first 60 AAs:
0.889289999999999
Total prob of N-in:
0.12421
outside
1  -  218
 
 

Population Genetic Test Statistics

Pi
222.474513
Theta
233.808127
Tajima's D
-0.719638
CLR
0.447697
CSRT
0.194190290485476
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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