Gene

KWMTBOMO09323

Pre Gene Modal

BGIBMGA003294

Annotation

PREDICTED:_uncharacterized_protein_LOC106137299_[Amyelois_transitella]

Location

Bomo_Chr15(-):16023322-16025864      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.178

CDS

ATGTTGTATGACGATTTTAAACCTATCGTAGATTTAGTACTCAATAACTGGACAGCTTTACAACTAGCTGTTGAACATGGTATGGGAGCTCCAGGGGGCGAAAAGACGGCACAGTTAATGGCAGTGTATATAGCAAGATATTGTGTTGAAAATGTAGTGGATAGAGATGAGTTGGCTGAAGTGATAGAAGATCTCATGGATGAAGAGTTTGATACTGTCTGCCATGATGAATCTCCGAAAGAAATAGCAAATCTACTCATACTTTACCTTACTTTACTAAAAGAGGGACATCATGATGAGTTGAGAGCTAGGATTGAGGCAATGCCTAAATGTCAGAAATGGTTGAGTCAACCAATACATGAATCAGTTCCTCCACAACACCATGGCAACCCAGATGATGACACAACAAGCAGTAGCAGTGAAGATGAAGAAGAATTACCTGAAAATGTATCAAATGTGGATGAAATAGGGAAGGACAAGCAAGATTCTGAGCCTATGGACGAGGACGTTGAACCTGGCTGGACCGTGGTTCGAACTAGGAGGAAAAAGTAG

Protein

MLYDDFKPIVDLVLNNWTALQLAVEHGMGAPGGEKTAQLMAVYIARYCVENVVDRDELAEVIEDLMDEEFDTVCHDESPKEIANLLILYLTLLKEGHHDELRARIEAMPKCQKWLSQPIHESVPPQHHGNPDDDTTSSSSEDEEELPENVSNVDEIGKDKQDSEPMDEDVEPGWTVVRTRRKK

Uniprot

H9J1A7   A0A1E1WV93   A0A2H1VC60   A0A3S2PI61   A0A212FFN6   S4PSE4   + More
A0A194Q1C4   A0A2W1BD90   A0A0N0PD98   A0A2A4K2H8   A0A0L7KP48   A0A182ILZ4   A0A1Y9H9I9   A0A182YHR6   A0A182ML96   A0A182V6L2   A0A182XP19   A0A084W0H6   A0A182L8C2   A0A182HK59   A0A182VW58   A0A182UFM6   U5EUH4   Q7PX19   A0A182NQX5   A0A1J1IDY2   A0A182PR97   Q175X0   C6ZQP9   A0A1I8N6S1   A0A023EJF3   A0A2M4ATX6   A0A182GGJ8   A0A2M4ATY7   A0A0L0BNZ8   W5JUN4   A0A2M4C0I6   A0A2M3ZDI0   A0A1Y1KUD3   B0WXS3   C6ZQP8   A0A182JXJ4   A0A1A9X471   A0A0C9RL45   A0A034V295   A0A0K8UU91   A0A0A1WYD9   B4JGJ8   A0A067RHG1   A0A0K8TS93   B4K6D9   A0A0M3QXY5   A0A1I8P723   B4LYT1   B4NK41   A0A1B0DBK6   B3LY27   A0A2H4Z0U8  

Pubmed

19121390    22118469    23622113    26354079    28756777    26227816    + More
25244985    24438588    20966253    12364791    14747013    17210077    17510324    20496585    25315136    24945155    26483478    26108605    20920257    23761445    28004739    25348373    25830018    17994087    24845553    26369729   

EMBL

BABH01024042    GDQN01000101    JAT90953.1    ODYU01001769    SOQ38433.1    RSAL01000026    + More
RVE52088.1    AGBW02008792    OWR52551.1    GAIX01013933    JAA78627.1    KQ459581    KPI99123.1    KZ150438    PZC70870.1    KQ460419    KPJ14858.1    NWSH01000200    PCG78465.1    JTDY01007948    KOB64841.1    AXCN02001487    AXCM01002061    ATLV01019122    KE525262    KFB43720.1    APCN01000817    GANO01002323    JAB57548.1    AAAB01008987    EAA01496.5    CVRI01000047    CRK97764.1    CH477393    EAT41929.1    EZ114850    ACU30903.1    GAPW01004518    JAC09080.1    GGFK01010893    MBW44214.1    JXUM01061844    KQ562171    KXJ76510.1    GGFK01010920    MBW44241.1    JRES01001582    KNC21782.1    ADMH02000021    ETN68062.1    GGFJ01009688    MBW58829.1    GGFM01005787    MBW26538.1    GEZM01075222    JAV64198.1    DS232173    EDS36733.1    EZ114849    ACU30902.1    GBYB01014047    JAG83814.1    GAKP01022715    JAC36237.1    GDHF01022065    JAI30249.1    GBXI01010475    JAD03817.1    CH916369    EDV93695.1    KK852680    KDR18578.1    GDAI01000803    JAI16800.1    CH933806    EDW15212.1    CP012526    ALC46733.1    CH940650    EDW67008.1    CH964272    EDW85083.1    AJVK01030073    CH902617    EDV42883.1    KY204821    KY204823    AUF40910.1    AUF40912.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000053240    UP000218220    + More
UP000037510    UP000075880    UP000075886    UP000076408    UP000075883    UP000075903    UP000076407    UP000030765    UP000075882    UP000075840    UP000075920    UP000075902    UP000007062    UP000075884    UP000183832    UP000075885    UP000008820    UP000095301    UP000069940    UP000249989    UP000037069    UP000000673    UP000002320    UP000075881    UP000091820    UP000001070    UP000027135    UP000009192    UP000092553    UP000095300    UP000008792    UP000007798    UP000092462    UP000007801   

PRIDE

H9J1A7   

Pfam

PF10273   WGG

Interpro

IPR019398   Pre-rRNA_process_TSR2        + More
IPR026314   YLP_motif_con_p1       
IPR027417   P-loop_NTPase       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

H9J1A7   A0A1E1WV93   A0A2H1VC60   A0A3S2PI61   A0A212FFN6   S4PSE4   + More
A0A194Q1C4   A0A2W1BD90   A0A0N0PD98   A0A2A4K2H8   A0A0L7KP48   A0A182ILZ4   A0A1Y9H9I9   A0A182YHR6   A0A182ML96   A0A182V6L2   A0A182XP19   A0A084W0H6   A0A182L8C2   A0A182HK59   A0A182VW58   A0A182UFM6   U5EUH4   Q7PX19   A0A182NQX5   A0A1J1IDY2   A0A182PR97   Q175X0   C6ZQP9   A0A1I8N6S1   A0A023EJF3   A0A2M4ATX6   A0A182GGJ8   A0A2M4ATY7   A0A0L0BNZ8   W5JUN4   A0A2M4C0I6   A0A2M3ZDI0   A0A1Y1KUD3   B0WXS3   C6ZQP8   A0A182JXJ4   A0A1A9X471   A0A0C9RL45   A0A034V295   A0A0K8UU91   A0A0A1WYD9   B4JGJ8   A0A067RHG1   A0A0K8TS93   B4K6D9   A0A0M3QXY5   A0A1I8P723   B4LYT1   B4NK41   A0A1B0DBK6   B3LY27   A0A2H4Z0U8  

PDB

6G04     E-value=0.0122143,     Score=86

KEGG

101739155    K14800 pre-rRNA-processing protein TSR2 | (RefSeq) uncharacterized LOC101739155

GO

GO:0000462   GO:0005634   GO:0016021  

PANTHER

PTHR21250   PTHR13413  

Length:

183

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0177

Exp number, first 60 AAs:

0.01752

Total prob of N-in:

0.17137

outside

1  -  183

 

 

Pi

276.265599

Theta

195.223327

Tajima's D

1.294188

CLR

0.190695

CSRT

0.737463126843658

Interpretation

Uncertain