SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09313  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003300
Annotation
leucine_zipper_protein_[Bombyx_mori]
Full name
Defective in cullin neddylation protein       + More
DCN1-like protein      
Alternative Name
Defective in cullin neddylation protein 1-like protein
Location in the cell
Cytoplasmic   Reliability : 3.098
 

Sequence

CDS
ATGAATAAATTAAAATCGTCACAGAGGGACAAAGTGAAGAAGTTCGTCGCTTTCACGCAGACGAGCGAAAGCACAGCTATATATTGTCTCTCACAAAACGATTGGAAATTAGATCTGGCCAGCGACAATTACTTCCAAAACCCCGATGCGTACTACAAAGATTCCATAAAAACCTCAGTGGATAGAAAAAAGCTTGAACAACTCTTCAACAAATACAGAGACCAACAAGAACTGGATAAAATTACGGCAGACGGGGTCATGAAATTCTTAGAAGACCTAAACTTAAGTCCAGAGTCAATTTTAGTTTTAATTATAGCGTGGAAATGCAAAGCAGCTGTACAATGTGAATTCACTAAAGATGAGTTTATTATGGGCATGGTTGAGTTGGCTGTTGACGGATTAGACAAATTAAAAGCTAAATTACCAACATTAGAATCAGAATTAAAAGATTTAAATAAATTTAAGGATTTTTACCACTTCACATTCAACTATGCTAAGAATGCTGGTCAGAAAGGTCTAGATCTAGACATGGCGATAGTTTATTGGAATATTGTATTGCGTGGAAGGTTTAAGTTCTTAGATGCTTGGTGCAAGTTTCTCACAGAGCACCACAAAAGATCTATACCAAAAGACACATGGAATCTTTTACTAGACTTTGCAACACAAATCGACGATGGCATGAGCAACTATGATGCTGAAGGTGCTTGGCCCGTATTGATTGATGACTTCGTAGAGTGGTGCCAGAAGCAGGAATTGACCTTGGATGGGGTCAAAGCTTTAGAGCCGGTGTCTGGCTAG
Protein
MNKLKSSQRDKVKKFVAFTQTSESTAIYCLSQNDWKLDLASDNYFQNPDAYYKDSIKTSVDRKKLEQLFNKYRDQQELDKITADGVMKFLEDLNLSPESILVLIIAWKCKAAVQCEFTKDEFIMGMVELAVDGLDKLKAKLPTLESELKDLNKFKDFYHFTFNYAKNAGQKGLDLDMAIVYWNIVLRGRFKFLDAWCKFLTEHHKRSIPKDTWNLLLDFATQIDDGMSNYDAEGAWPVLIDDFVEWCQKQELTLDGVKALEPVSG

Summary

Description
Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
EMBL
BABH01024010    DQ311219    ABD36164.1    RSAL01000026    RVE52082.1    KQ459581    + More
KPI99115.1    KQ460106    KPJ17840.1    KZ149923    PZC77677.1    ODYU01002150    SOQ39277.1    NWSH01001155    PCG72329.1    GDQN01010830    GDQN01003361    JAT80224.1    JAT87693.1    JTDY01000685    KOB76233.1    AGBW02009685    OWR50116.1    AK417331    BAN20546.1    GBHO01011032    GBRD01003429    GDHC01021343    GDHC01004964    JAG32572.1    JAG62392.1    JAP97285.1    JAQ13665.1    GFTR01004252    JAW12174.1    GDKW01001399    JAI55196.1    ACPB03005610    GAHY01001161    JAA76349.1    GECZ01026431    JAS43338.1    KK852665    KDR18960.1    NEVH01008214    PNF34515.1    GEZM01076959    GEZM01076958    JAV63515.1    KK107078    QOIP01000011    EZA60194.1    RLU17213.1    KQ971342    EFA03803.1    LJIG01022838    KRT78453.1    KQ976398    KYM92745.1    LBMM01007718    KMQ89491.1    KQ977259    KYN04563.1    KK121361    KFM80324.1    ADTU01001679    KQ980905    KYN11564.1    GL887973    EGI69357.1    KQ981979    KYN31355.1    KQ982648    KYQ53225.1    KQ434870    KZC09590.1    GL767538    EFZ13552.1    GBBK01003336    JAC21146.1    GBBL01001692    JAC25628.1    BT126865    AEE61827.1    GFAC01002552    JAT96636.1    KQ414657    KOC65695.1    GBBM01002159    JAC33259.1    JO843410    AEO35027.1    JRES01001542    KNC22152.1    GDAI01001048    JAI16555.1    ABJB010069252    ABJB010443466    DS941638    EEC18409.1    GADI01008444    GEFM01006792    JAA65364.1    JAP69004.1    APGK01037598    KB740948    KB632288    ENN77359.1    ERL91495.1    DS231922    EDS26649.1    GFPF01007132    MAA18278.1    NNAY01000718    OXU26813.1    GEDV01007566    JAP80991.1    GDHF01031106    JAI21208.1    GAKP01000778    JAC58174.1    JXUM01108785    KQ565264    KXJ71159.1    GFDL01012145    JAV22900.1    GFDL01012150    JAV22895.1    GACK01001180    JAA63854.1    CVRI01000064    CRL05391.1    GL449936    EFN81781.1    AJVK01007921    AJVK01007922    GBXI01012689    JAD01603.1    GFDF01004636    JAV09448.1    GDHF01004856    JAI47458.1    AAZX01006389    JR048349    AEY60637.1    GAMC01000928    JAC05628.1    GAIX01006210    JAA86350.1    KQ435727    KOX77941.1    KZ288393    PBC26327.1    GGLE01001851    MBY05977.1    JXJN01004432    CH964278    EDW85424.1    EZ423852    ADD20128.1    AFYH01019147    AFYH01019148    AFYH01019149    CH940647    EDW70600.1    GGFL01004120    MBW68298.1    ADMH02000180    ETN67471.1    CH933809    EDW18225.1    AHAT01003525    AHAT01003526    DS235124    EEB12236.1    CH902618    EDV40186.1    IACF01000140    LAB65947.1    AJWK01034748    AJWK01034749    AJWK01034750    GGFJ01007432    MBW56573.1    GGFM01004159    MBW24910.1    GGFK01008748    MBW42069.1   
Pfam
PF03556   Cullin_binding
Interpro
IPR009060   UBA-like_sf        + More
IPR014764   DCN-prot       
IPR005176   PONY_dom       
IPR033469   CYTH-like_dom_sf       
SUPFAM
SSF46934   SSF46934        + More
SSF55154   SSF55154       
PDB
5V88     E-value=2.21077e-73,     Score=699

Ontologies

Topology

Length:
265
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01313
Exp number, first 60 AAs:
0.00099
Total prob of N-in:
0.14501
outside
1  -  265
 
 

Population Genetic Test Statistics

Pi
201.30704
Theta
189.817916
Tajima's D
0.247902
CLR
0.002153
CSRT
0.434578271086446
Interpretation
Uncertain
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