Gene

KWMTBOMO09312  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003301

Annotation

NADH_dehydrogenase_[ubiquinone]_1_alpha_subcomplex_subunit_2_[Bombyx_mori]

Location

Bomo_Chr15(-):15752220-15754064      View in EpiBrowser

Full name

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2      

Location in the cell

Mitochondrial   Reliability : 2.389

CDS

ATGGCACTCCGCCTGGGAGGAGCACTGAAAGAACTGCGTATACATTTATGTCAAACCAGCAAACAGTCTGAGGGAGTGAGGGAATTTATCAAAAACAACTATGTCAATATTAAGAAGGAAAACCCCAATTTTCCTATATTAATTAGAGAATGCAGCGGTATTCAACCTAGAGTGTGGGCGCGTTATGAAAGAGGAGCTGAAAAATCAACACCTCTCACAAATTTATCAGCAAATGATGTTCAGTCGGCCATCAAGCAGTTAGTGAAGTGA

Protein

MALRLGGALKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVQSAIKQLVK

Description

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Uniprot

Q2F672   A0A3S2NND3   S4P4C2   A0A212F8P3   A0A0L7LL10   A0A2W1BYA8   + More
A0A194RK92   A0A2H1VES1   A0A218UP87   A0A3M0J7J4   A0A3L8SJL6   B5FZL8   A0A1W4WK34   A0A0Q3PEG2   A0A1Q3FMG2   N6T5D5   B0WUY1   U4UJ85   B5FZM2   A0A0M3I6Q0   F1LGU0   H3AA68   U5EQ10   A0A182VRW2   A0A182MAF5   Q4T469   A0A1V4KWH8   H3CFK0   A0A093PGE3   A0A1D5NVM2   A0A2P4STK7   A0A226P4E9   A0A182RH01   A0A182TBZ8   A0A026WIK8   A0A182PCV5   A0A3B5KM42   A0A210PPQ6   A0A182Y4L6   A0A182IXG9   A0A084WT31   A0A2M4C4H8   Q17GH9   A0A023EEI1   F6RB25   A0A0K2U4Z8   A0A1B0EXQ2   A0A0R3PBU0   A0A3Q3MRT4   A0A1L8E0F5   A0A182V9E4   A0A182NST8   A0A023EEH6   A0A182U4A4   A0A182XKB0   Q7Q997   A0A182HJN4   A0A2U9B794   C3YZN9   Q7QKY1   A0A182JWF8   A0A3Q3G388   A0A0K0FP67   W5J7E3   E2BE29   A0A0F6MWY8   A0A1I8EU10   A0A0K0JQC8   A0A0N4TMZ4   A0A1I7VXQ8   A0A1J1IAX8   A0A2G5VPB1   A8XU71   A0A3Q1HJV1   A0A1S3DGX4   C1C206   A0A336MR36   A0A0F8AHP9   A0A2M3Z7R8   A0A1S3DHA7   A0A3B4VRA5   A0A3Q3XB28   W5MZC5   A0A3Q3LVU4   U3K4F3   A0A2M4AIM1   A0A2I4CXB9   A0A261BKH4   E3LLU5   A0A3Q3Q7P2   M7BEI9   R7TA50   Q9XWG2   A0A3P6SS34   A0A0N4XV82   A0A1I7T6X8   A0A3B4XNT3   A0A286RXR3   A0A3Q2SSU6  

Pubmed

19121390    23622113    22118469    26227816    28756777    26354079    + More
30282656    17018643    23537049    21685128    9215903    15496914    15592404    24621616    24508170    30249741    21551351    28812685    25244985    24438588    17510324    24945155    26483478    18464734    12364791    14747013    17210077    18563158    9087549    20920257    23761445    20798317    25875231    29020939    26850696    17885136    25217238    14624247    25835551    26114425    26394399    23624526    23254933    9851916   

EMBL

BABH01024009    DQ311200    ABD36145.1    RSAL01000026    RVE52081.1    GAIX01006039    + More
JAA86521.1    AGBW02009685    OWR50115.1    JTDY01000685    KOB76228.1    KZ149923    PZC77676.1    KQ460106    KPJ17839.1    ODYU01002150    SOQ39276.1    MUZQ01000211    OWK55230.1    QRBI01000172    RMB96858.1    QUSF01000017    RLW03035.1    DQ214579    DQ214580    DQ214581    DQ214583    DQ214585    ACH44479.1    LMAW01002601    KQK79227.1    GFDL01006347    JAV28698.1    APGK01051815    KB741207    ENN72883.1    DS232112    EDS35299.1    KB632327    ERL92498.1    DQ214584    ACH44483.1    JI216585    ADY49344.1    AFYH01184426    GANO01003478    JAB56393.1    AXCM01000985    CAAE01009792    CAF92313.1    LSYS01001584    OPJ88307.1    KL669206    KFW75486.1    AADN05000073    PPHD01023741    POI27448.1    AWGT02000184    OXB74269.1    KK107185    QOIP01000012    EZA55808.1    RLU16312.1    NEDP02005565    OWF38471.1    ATLV01026812    KE525419    KFB53375.1    GGFJ01011081    MBW60222.1    CH477259    EAT45746.1    JXUM01012921    GAPW01006549    KQ560364    JAC07049.1    KXJ82806.1    HACA01015430    CDW32791.1    AJVK01015004    UYYA01000164    VDM52781.1    GFDF01002032    JAV12052.1    GAPW01006548    JAC07050.1    AAAB01008904    EAA09597.3    APCN01002192    CP026246    AWO99729.1    GG666566    EEN54310.1    AAAB01008198    EAA03299.3    ADMH02002120    ETN58785.1    GL447755    EFN86016.1    KC217563    MF438253    AGV76769.1    ATN38472.1    UZAD01013165    VDN90985.1    JH712523    EFO13467.2    CVRI01000047    CRK97439.1    PDUG01000001    PIC53604.1    HE601380    CAP36196.1    BT080885    ACO15309.1    UFQS01001478    UFQT01001478    SSX11157.1    SSX30727.1    KQ041943    KKF20636.1    GGFM01003816    MBW24567.1    AHAT01005341    AGTO01021631    GGFK01007318    MBW40639.1    NIPN01000117    OZG10824.1    DS268411    NMWX01000006    LFJK02000382    EFP02939.1    OZF98351.1    POM37963.1    KB525470    EMP36341.1    AMQN01003552    AMQN01003553    AMQN01003554    KB312101    ELT87889.1    BX284601    CAA21708.2    UYRX01000036    VDK70485.1    UYSL01019822    VDL70274.1    KY974274    ASW35074.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000037510    UP000053240    UP000197619    + More
UP000269221    UP000276834    UP000192223    UP000051836    UP000019118    UP000002320    UP000030742    UP000036681    UP000008672    UP000075920    UP000075883    UP000190648    UP000007303    UP000053258    UP000000539    UP000198419    UP000075900    UP000075901    UP000053097    UP000279307    UP000075885    UP000005226    UP000242188    UP000076408    UP000075880    UP000030765    UP000008820    UP000069940    UP000249989    UP000002279    UP000092462    UP000050601    UP000267027    UP000261660    UP000075903    UP000075884    UP000075902    UP000076407    UP000007062    UP000075840    UP000246464    UP000001554    UP000075881    UP000264800    UP000035680    UP000000673    UP000008237    UP000093561    UP000006672    UP000038020    UP000278627    UP000095285    UP000183832    UP000230233    UP000008549    UP000257200    UP000079169    UP000261420    UP000261620    UP000018468    UP000261640    UP000016665    UP000192220    UP000216463    UP000008281    UP000216624    UP000237256    UP000261600    UP000031443    UP000014760    UP000001940    UP000277928    UP000038043    UP000271162    UP000095282    UP000261360    UP000265000   

PRIDE

Q2F672   

Pfam

PF05047   L51_S25_CI-B8

Interpro

IPR036249   Thioredoxin-like_sf        + More
IPR016464   NADH_Ub_cplx-1_asu_su-2       
IPR007741   Ribosome/NADH_DH       

SUPFAM

SSF52833   SSF52833       

ProteinModelPortal

Q2F672   A0A3S2NND3   S4P4C2   A0A212F8P3   A0A0L7LL10   A0A2W1BYA8   + More
A0A194RK92   A0A2H1VES1   A0A218UP87   A0A3M0J7J4   A0A3L8SJL6   B5FZL8   A0A1W4WK34   A0A0Q3PEG2   A0A1Q3FMG2   N6T5D5   B0WUY1   U4UJ85   B5FZM2   A0A0M3I6Q0   F1LGU0   H3AA68   U5EQ10   A0A182VRW2   A0A182MAF5   Q4T469   A0A1V4KWH8   H3CFK0   A0A093PGE3   A0A1D5NVM2   A0A2P4STK7   A0A226P4E9   A0A182RH01   A0A182TBZ8   A0A026WIK8   A0A182PCV5   A0A3B5KM42   A0A210PPQ6   A0A182Y4L6   A0A182IXG9   A0A084WT31   A0A2M4C4H8   Q17GH9   A0A023EEI1   F6RB25   A0A0K2U4Z8   A0A1B0EXQ2   A0A0R3PBU0   A0A3Q3MRT4   A0A1L8E0F5   A0A182V9E4   A0A182NST8   A0A023EEH6   A0A182U4A4   A0A182XKB0   Q7Q997   A0A182HJN4   A0A2U9B794   C3YZN9   Q7QKY1   A0A182JWF8   A0A3Q3G388   A0A0K0FP67   W5J7E3   E2BE29   A0A0F6MWY8   A0A1I8EU10   A0A0K0JQC8   A0A0N4TMZ4   A0A1I7VXQ8   A0A1J1IAX8   A0A2G5VPB1   A8XU71   A0A3Q1HJV1   A0A1S3DGX4   C1C206   A0A336MR36   A0A0F8AHP9   A0A2M3Z7R8   A0A1S3DHA7   A0A3B4VRA5   A0A3Q3XB28   W5MZC5   A0A3Q3LVU4   U3K4F3   A0A2M4AIM1   A0A2I4CXB9   A0A261BKH4   E3LLU5   A0A3Q3Q7P2   M7BEI9   R7TA50   Q9XWG2   A0A3P6SS34   A0A0N4XV82   A0A1I7T6X8   A0A3B4XNT3   A0A286RXR3   A0A3Q2SSU6  

PDB

1S3A     E-value=2.85181e-21,     Score=244

KEGG

693085    K03946 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 | (RefSeq) Ndufa2; NADH dehydrog

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0032981   GO:0055114   GO:0005747   GO:0070469   GO:0005743   GO:0005840   GO:0006120   GO:0008137  

PANTHER

PTHR12878  

Subcellular location

Mitochondrion inner membrane  

Length:

89

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11811

outside

1  -  89

 

 

Pi

282.531146

Theta

171.791926

Tajima's D

2.74952

CLR

0.567153

CSRT

0.965001749912504

Interpretation

Uncertain