SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09308  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003438
Annotation
putative_kelch_repeat_protein_[Danaus_plexippus]
Full name
Kelch domain-containing protein 4      
Location in the cell
Cytoplasmic   Reliability : 1.481 Nuclear   Reliability : 1.654
 

Sequence

CDS
ATGGGTAAAAAGAAAAATAAGAATAAAGTTAGTGGCGCTGTTAAAACCGCAGCAAAAACTGAAAAAAAGCTAGCTAGCAAATTAAAAAAAGAACTCGCAAATCTTGGTGAGGAAGATATAGCTAAAGTGATAGCTGAGATAGAACGGGAGGAAGCTAAACGATATGCTGCATCAGAGAAGGTCCTCGAAAAGCCACCATCCTCCAGAGCGTACGCAACGCTCACCCCACATCCAATCAATAATGAGCTTGTGCTGTTTGGTGGAGAATACCACAACGGACAAAAGACAGAAACATACAACGATTTATTTATATATAACACAGTGAGTAATGTTTGGAGGCAACTGAAAGCACCCGGTGCCCCGCCTCCGCGTAGTGCCCATCAAGCTGTCTCCACCCCTGCTAACAAAGGTGAGCTTTGGATATTTGGAGGAGAATTCACGAGTCCATCAGAAACACAATTTTATCATTATAAAGATTTGTGGTGCTTCTCATTTGTTGAGAGAAAATGGGAAAAGGTGGTAGCACCCAATGGTCCTTCACCTCGCTCAGGGCACAGGATGGCGCTTCTGAGTCGAAAGTTATATGTCTTCGGAGGATATTGCGATGACGGACGGGACTGTCGCTATTTCGATGATCTGTACACCTTCTGCCTGGACACGAGGACCTGGAGTAAAGTGACTGTGAGTGGCCGAGGACCCAGCCCGAGATCGGCCTGTGTTATGCTACCTTGCGGGAATGATTCGTTATTGGTGTACGGAGGTTTCTCCAGAGTCCGAGACGGTAAGACGGAGCGCGCCTGTACGCACGGCGACATGTTCCGTCTCAGCACGAAGCAGGGGGGAGCCCTAACGTGGCGCTCCGTGTCCGTCAGCGGAGCCCCGCCGCCCCGGGCCGGAGTCGCGGGTGCTGCTAACGTCGTGGCTGATAGGGCTTATGTTTTCGGCGGAGTCAGTGACGTGGAAGAAACCGATGAAGAGCTCCGTGGGGAGATGAGCGACGACCTCTTATTGCTGGAGCTGGATACCGCGCGATGGCATCACGTCACCCTTAAGACTGAACGGCAGACCAGGCGGGACACTGAAGACCCTGGGAGCGTGGACATGGAGGAAGGTGAACAGAAGGAAGCTATGACAGTAGTCACAGATGAGGTGTTCACGATGAAGTTGGGTGGTGCTGCTCCGACCCCCAACACTCTCCCCCATTCTGCCGCGAACGAGGAGTCTCCCCCCCGCAGCGGTCCCGGCCCGAGGATGTCGGCCATGCTGGTGGTGCACCGCTCCGTCCTCTATGTCTACGGAGGAGTTCTGGAGAAAGACGAGAAACAGTTCTATTTGGGAGACATGTATAGTTTAGATCTACACAAATTGAACGAATGGAAAACTATGATACGACAGCCCGCGTTGCCGGATTGGCTCGGATCTGATTCGGAATCTGAATCGGACGGATCGGATTCAGAGACCGAGAGCGATGAATCTGATTGA
Protein
MGKKKNKNKVSGAVKTAAKTEKKLASKLKKELANLGEEDIAKVIAEIEREEAKRYAASEKVLEKPPSSRAYATLTPHPINNELVLFGGEYHNGQKTETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWIFGGEFTSPSETQFYHYKDLWCFSFVERKWEKVVAPNGPSPRSGHRMALLSRKLYVFGGYCDDGRDCRYFDDLYTFCLDTRTWSKVTVSGRGPSPRSACVMLPCGNDSLLVYGGFSRVRDGKTERACTHGDMFRLSTKQGGALTWRSVSVSGAPPPRAGVAGAANVVADRAYVFGGVSDVEETDEELRGEMSDDLLLLELDTARWHHVTLKTERQTRRDTEDPGSVDMEEGEQKEAMTVVTDEVFTMKLGGAAPTPNTLPHSAANEESPPRSGPGPRMSAMLVVHRSVLYVYGGVLEKDEKQFYLGDMYSLDLHKLNEWKTMIRQPALPDWLGSDSESESDGSDSETESDESD

Summary

Keywords
Complete proteome   Kelch repeat   Phosphoprotein   Reference proteome   Repeat  
Feature
chain  Kelch domain-containing protein 4
EMBL
BABH01024002    NWSH01008543    PCG62511.1    RSAL01000026    RVE52078.1    AGBW02008513    + More
OWR53128.1    KQ459602    KPI93622.1    KQ460106    KPJ17835.1    KQ434846    KZC08287.1    NNAY01000392    OXU28692.1    KQ435724    KOX78429.1    GL451853    EFN78372.1    KK107038    QOIP01000009    EZA61935.1    RLU18534.1    KZ288353    PBC27328.1    GAMC01004814    JAC01742.1    JO841286    AEO32903.1    GEZM01074318    JAV64599.1    KQ971334    EEZ99669.1    GFTR01006757    JAW09669.1    GDHF01019414    JAI32900.1    JRES01000240    KNC33050.1    NEVH01021191    PNF20125.1    GECL01002076    JAP04048.1    GACK01002104    JAA62930.1    GBHO01037445    GBRD01014416    GDHC01019331    GDHC01002497    JAG06159.1    JAG51410.1    JAP99297.1    JAQ16132.1    GBXI01008064    JAD06228.1    GEDV01002487    JAP86070.1    KK852604    KDR20441.1    GBBI01004037    JAC14675.1    GAKP01009422    JAC49530.1    GFPF01009247    MAA20393.1    EZ422441    ADD18717.1    ACPB03006763    GGFK01007848    MBW41169.1    AXCM01005600    CH963876    EDW76934.1    GDIQ01229453    JAK22272.1    GDIQ01220943    JAK30782.1    GFPF01009248    MAA20394.1    CP012528    ALC49733.1    GDIQ01201005    JAK50720.1    LRGB01002121    KZS09098.1    GDIP01123189    JAL80525.1    GDIP01162651    JAJ60751.1    GGFJ01004274    MBW53415.1    GDIP01008541    JAM95174.1    GGFJ01004273    MBW53414.1    KB631992    ERL87774.1    ADMH02002019    ETN59975.1    GEGO01005202    JAR90202.1    KQ414758    KOC61526.1    OUUW01000009    SPP85063.1    CH940653    EDW62353.1    GDIP01232439    JAI90962.1    GGFM01004075    MBW24826.1    JXUM01019391    KQ560541    KXJ81939.1    DS235862    EEB19225.1    CH379069    EAL30916.1    CH479188    EDW40355.1    CM000363    CM002912    EDX10258.1    KMY99263.1    CCAG010015850    JXJN01002268    BC012312    BC023738    GL732541    EFX82027.1    GDIQ01220944    JAK30781.1    CH916371    EDV92286.1    AC121975    CH466525    EDL11666.1    CH902618    EDV39061.1    CM000159    EDW94319.1    GDIP01199589    GDIP01172192    JAJ23813.1    GDIP01124293    JAL79421.1    CH933812    EDW06001.1    AE014296    AY052031    AAF49898.1    AAK93455.1    ERL87773.1    GDIP01138496    JAL65218.1    CH954178    EDV51583.1    CH477639    EAT37949.1   
Pfam
PF01344   Kelch_1        + More
PF07646   Kelch_2
PF00405   Transferrin
PF00408   PGM_PMM_IV
PF02878   PGM_PMM_I
Interpro
IPR015915   Kelch-typ_b-propeller        + More
IPR011043   Gal_Oxase/kelch_b-propeller       
IPR006652   Kelch_1       
IPR011498   Kelch_2       
IPR036900   A-D-PHexomutase_C_sf       
IPR016657   PAGM       
IPR018195   Transferrin_Fe_BS       
IPR005844   A-D-PHexomutase_a/b/a-I       
IPR001156   Transferrin-like_dom       
IPR016066   A-D-PHexomutase_CS       
IPR016055   A-D-PHexomutase_a/b/a-I/II/III       
IPR005843   A-D-PHexomutase_C       
SUPFAM
SSF117281   SSF117281        + More
SSF50965   SSF50965       
SSF55957   SSF55957       
SSF53738   SSF53738       
Gene 3D
PDB
6DO5     E-value=4.56508e-09,     Score=147

Ontologies

Topology

Length:
493
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01585
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03200
outside
1  -  493
 
 

Population Genetic Test Statistics

Pi
219.167436
Theta
192.259477
Tajima's D
0.793157
CLR
0.597169
CSRT
0.5999200039998
Interpretation
Uncertain
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