Gene

KWMTBOMO09298

Pre Gene Modal

BGIBMGA003433

Annotation

RCC1_domain-containing_protein_1_[Operophtera_brumata]

Location

Bomo_Chr15(+):15436131-15437727      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.168 Nuclear   Reliability : 1.105

CDS

ATGTCTAAATCTGAAGATCCAAATTTTGACTTTAGATTGGCTAATTTAATGCAAATCAATTGGTCATATAATATATTTCAACTAAGAAAAAATCTTTATTTATTGGGCGCCTTTGACGGTAGGAAAATCGCTAAGAAAATTGATATACCAGAAGAGTGCAGAAAATCGCCACTCGTTGCCGGTAACGACTACAACTTGGTTATTGGCCACAATAATTCGAGTGCCCTTTGGATATTGAATTTGGAAGATAATAGCATAAAGAATGTTTATTTGGATAGAGAATTGCCTCTTGAATTATCGCCCAAACGTAATAAAACAGATAATGAGATACAAAAGCTTGTTGTTAATAATTTTTCATGCCTCTACCTTACTAAAGGCAAGAATGTTTATAGCGGAATACTTCCAAGTTACATAGATACAAGCCACTGTAATGGACATATTATTGATGTTGCTTGTGGTTATGAACATTACATGCTTCTCACTAGTACTGGTTATGTCTATACTTGGGGAGATGGCAGGAGATTGCAACTAGGTCAGGATGATACAAGCAATTTAGAGACACCCACACAGGTTGAAGCCCTGGCTGGAATAAAAATTATTAAAATAAAAGCAGGTGGGTGGCATTCCATGGCACTCAGTGAATTTGGGGATCTCTATGTTTGGGGCTTGAATGACACTGGTCAATTAGGTATAAAGGAAAGTGAAAATGACTTAAAAAGCTATGCTTTACCAAAGTTAGTTGATCTATATGATGATAATGAAGAAGTTCATCTCCAAATTAAGGACATAGCCTGTGGCTCGAAGCATTCTGTATTATTATTAGAAGATGGCTCAGTTTGGACCACTGGTGCAAATAAATATGGACAACTAGCATGCCCACAATATCCAAACTCAAAAAACTTCAATAAGGTCTGTGTAATCAAAGAAGCATGTAGACTGAAATGTGGACCATGGACAACTGTAGTTGTATGCAATTAA

Protein

MSKSEDPNFDFRLANLMQINWSYNIFQLRKNLYLLGAFDGRKIAKKIDIPEECRKSPLVAGNDYNLVIGHNNSSALWILNLEDNSIKNVYLDRELPLELSPKRNKTDNEIQKLVVNNFSCLYLTKGKNVYSGILPSYIDTSHCNGHIIDVACGYEHYMLLTSTGYVYTWGDGRRLQLGQDDTSNLETPTQVEALAGIKIIKIKAGGWHSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACGSKHSVLLLEDGSVWTTGANKYGQLACPQYPNSKNFNKVCVIKEACRLKCGPWTTVVVCN

Uniprot

H9J1P6   A0A2H1V8T6   A0A0L7LD68   A0A2A4J9K9   A0A1E1WCX6   A0A3S2TQ45   + More
S4PRX1   A0A194PYI2   A0A194QUN2   A0A1B6JUZ2   A0A1B6F374   A0A154PSS9   A0A1B6LQS4   A0A0J7KB09   E2AS43   A0A195E3W8   A0A067RE98   A0A195BSB1   A0A1I8Q0J4   A0A158NXY1   A0A0L7QKR4   E2B430   A0A151WQY4   A0A2A3EV34   F4X4D0   A0A088AFD2   A0A0N8APE8   B4KAP1   A0A164QJE0   A0A151IGS5   K7JJB0   A0A0K8UPF0   B3LVJ5   A0A1W4VRG3   A0A1A9W5P2   A0A1I8MYC4   A0A026WA86   E9ICC6   A0A034V9W0   A0A2J7RR47   A0A2J7RR60   A0A2J7RR49   A0A2J7RR56   A0A0A1WQ12   A0A0M3QYC7   A0A1A9ZSV5   T1KZX9   A0A1A9VDQ0   W8AUZ1   A0A1A9Y0I9   A0A1W4W453   B4JRK5   A0A1B0ETG2   B4NHQ3   A0A0Q9WR27   B4M0P2   A0A1B0B2Y6   A0A0Q9WGB9   B3P8Q4   B4G644   A0A3B0JL36   Q29AP8   A0A443SQF2   B4QZB6   A0A132AB82  

Pubmed

19121390    26227816    23622113    26354079    20798317    24845553    + More
21347285    21719571    17994087    20075255    25315136    24508170    21282665    25348373    25830018    24495485    18057021    15632085    26555130   

EMBL

BABH01023977    ODYU01001255    SOQ37211.1    JTDY01001598    KOB73417.1    NWSH01002527    + More
PCG68083.1    GDQN01006249    JAT84805.1    RSAL01000026    RVE52070.1    GAIX01000440    JAA92120.1    KQ459594    KPI96210.1    KQ461108    KPJ09177.1    GECU01022006    GECU01004681    JAS85700.1    JAT03026.1    GECZ01025109    JAS44660.1    KQ435180    KZC14969.1    GEBQ01014038    JAT25939.1    LBMM01010461    KMQ87446.1    GL442221    EFN63743.1    KQ979685    KYN19776.1    KK852521    KDR22087.1    KQ976423    KYM88892.1    ADTU01000542    KQ414940    KOC59233.1    GL445463    EFN89544.1    KQ982815    KYQ50218.1    KZ288185    PBC34931.1    GL888633    EGI58726.1    GDIQ01255875    JAJ95849.1    CH933806    EDW16778.1    LRGB01002384    KZS07808.1    KQ977671    KYN00621.1    GDHF01023853    JAI28461.1    CH902617    EDV42565.1    KK107323    EZA52561.1    GL762231    EFZ21794.1    GAKP01019665    GAKP01019663    JAC39289.1    NEVH01000611    PNF43310.1    PNF43313.1    PNF43316.1    PNF43314.1    GBXI01013365    JAD00927.1    CP012526    ALC47389.1    CAEY01000758    GAMC01013850    GAMC01013848    JAB92705.1    CH916373    EDV94395.1    CCAG010010758    CH964272    EDW84663.2    CH940650    KRF83252.1    EDW67334.2    JXJN01007739    KRF83250.1    KRF83251.1    CH954182    EDV54218.1    CH479179    EDW23797.1    OUUW01000007    SPP82935.1    CM000070    EAL27301.2    NCKV01000786    RWS29744.1    CM000364    EDX13852.1    JXLN01012231    KPM08167.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000283053    UP000053268    UP000053240    + More
UP000076502    UP000036403    UP000000311    UP000078492    UP000027135    UP000078540    UP000095300    UP000005205    UP000053825    UP000008237    UP000075809    UP000242457    UP000007755    UP000005203    UP000009192    UP000076858    UP000078542    UP000002358    UP000007801    UP000192221    UP000091820    UP000095301    UP000053097    UP000235965    UP000092553    UP000092445    UP000015104    UP000078200    UP000092443    UP000001070    UP000092444    UP000007798    UP000008792    UP000092460    UP000008711    UP000008744    UP000268350    UP000001819    UP000288716    UP000000304   

PRIDE

H9J1P6   

Pfam

PF00415   RCC1

Interpro

IPR009091   RCC1/BLIP-II        + More
IPR000408   Reg_chr_condens       

SUPFAM

SSF50985   SSF50985       

Gene 3D

2.130.10.30    

ProteinModelPortal

H9J1P6   A0A2H1V8T6   A0A0L7LD68   A0A2A4J9K9   A0A1E1WCX6   A0A3S2TQ45   + More
S4PRX1   A0A194PYI2   A0A194QUN2   A0A1B6JUZ2   A0A1B6F374   A0A154PSS9   A0A1B6LQS4   A0A0J7KB09   E2AS43   A0A195E3W8   A0A067RE98   A0A195BSB1   A0A1I8Q0J4   A0A158NXY1   A0A0L7QKR4   E2B430   A0A151WQY4   A0A2A3EV34   F4X4D0   A0A088AFD2   A0A0N8APE8   B4KAP1   A0A164QJE0   A0A151IGS5   K7JJB0   A0A0K8UPF0   B3LVJ5   A0A1W4VRG3   A0A1A9W5P2   A0A1I8MYC4   A0A026WA86   E9ICC6   A0A034V9W0   A0A2J7RR47   A0A2J7RR60   A0A2J7RR49   A0A2J7RR56   A0A0A1WQ12   A0A0M3QYC7   A0A1A9ZSV5   T1KZX9   A0A1A9VDQ0   W8AUZ1   A0A1A9Y0I9   A0A1W4W453   B4JRK5   A0A1B0ETG2   B4NHQ3   A0A0Q9WR27   B4M0P2   A0A1B0B2Y6   A0A0Q9WGB9   B3P8Q4   B4G644   A0A3B0JL36   Q29AP8   A0A443SQF2   B4QZB6   A0A132AB82  

PDB

3KCI     E-value=1.14992e-14,     Score=193

KEGG

101738197    no KO assigned | (RefSeq) RCC1 domain-containing protein 1

GO

GO:0016874  

Length:

325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0373399999999999

Exp number, first 60 AAs:

0.02083

Total prob of N-in:

0.01501

outside

1  -  325

 

 

Pi

249.821121

Theta

210.674193

Tajima's D

0.585008

CLR

0

CSRT

0.534823258837058

Interpretation

Uncertain