SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09295
Pre Gene Modal
BGIBMGA003431
Annotation
PREDICTED:_neural_Wiskott-Aldrich_syndrome_protein-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.425
 

Sequence

CDS
ATGCCGAGGGGAGAGCACAGAACGACAAATCTCCTGTCACGCGAGGAGAACGAACAGGTGTTCAGCCTAATAGGACCAAAATGTCAGAGTCTAGCAACTACAGTTGTTCAACTCTTCACAACTGAAGGTCCAGCACATTCTGAATGGAAGAAGAGAGATACTGGTGTACTGTGCCTTATAAAGGACAATGGCAAGCGCTCATACTTCTTCAGGATTTACTGTTTGTACCGAAAAGCAATGATATGGGAGCACGAAGTTTATATGCAGATAGAATATAAGAACCCAAGGCCTTATTTACACACTTTCGAAGCTGAGGAATACATGACAGCATTCAACTTTGCCAATGAAGAAGAAGCTCAGATCCTAAAGAAGATTCTAATCGAGAAGATTGAATTAAGGAAGACGAGAAGAGAAGAAAGGAGGCAACGTGCCTTAACGGCGGCACGGGCCAGTAGCGTGGTGGAGCCGAGACAAAATGGCGTCCTACCCCCGCTCCCGGCACCGGAACCGGAACCTGCACCCGTACTCCCACCGAAAACGAATTTAGCAGGTACGTACACACTGAAGAGCTCCGGAAAACGGAAAACGACAAGGAAATTGACTAAAGCCGACATCGGGATGCCTCACAACTTCACGCACGTTTCTCACATCGGATGGGATAAAGATAAAGGGTTCGACGTGGAGACCACACAGGACGAGAAGCTCCTGTCGTTTCTGAAGGAGGCAGGAGTTTCGGAGGTCCACCTTCGCGACCAGGAGACGAGGAAATTCATATATAGCTTCATAGAGACGAACGGTGGCATTAACGCTGTCATGGAGGATCTGCACACAAACAATGAGAAGCCAATCAAAGAGCGCAGCGCGCCGTCCCGCGCGCCCGCTCCCCCCGTCCCGCAGCGCAGCCCCGCCCTGCCGCACCCCCCCGCGCCACGTACGTACAGCACGCCGCGACACGTGCAAACGTTCACATGA
Protein
MPRGEHRTTNLLSREENEQVFSLIGPKCQSLATTVVQLFTTEGPAHSEWKKRDTGVLCLIKDNGKRSYFFRIYCLYRKAMIWEHEVYMQIEYKNPRPYLHTFEAEEYMTAFNFANEEEAQILKKILIEKIELRKTRREERRQRALTAARASSVVEPRQNGVLPPLPAPEPEPAPVLPPKTNLAGTYTLKSSGKRKTTRKLTKADIGMPHNFTHVSHIGWDKDKGFDVETTQDEKLLSFLKEAGVSEVHLRDQETRKFIYSFIETNGGINAVMEDLHTNNEKPIKERSAPSRAPAPPVPQRSPALPHPPAPRTYSTPRHVQTFT

Summary

Pfam
PF00786   PBD        + More
PF00568   WH1
PF02205   WH2
Interpro
IPR000697   WH1/EVH1_dom        + More
IPR000095   CRIB_dom       
IPR011993   PH-like_dom_sf       
IPR027641   WASP       
IPR036936   CRIB_dom_sf       
IPR011026   WASP_C       
IPR033927   WASPfam_EVH1       
IPR003124   WH2_dom       
IPR030214   N-WASP       
SUPFAM
SSF47912   SSF47912       
Gene 3D
PDB
2IFS     E-value=1.11917e-18,     Score=228

Ontologies

Topology

Length:
323
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0186
Exp number, first 60 AAs:
0.01299
Total prob of N-in:
0.06770
outside
1  -  323
 
 

Population Genetic Test Statistics

Pi
178.517312
Theta
172.048509
Tajima's D
0.912016
CLR
1.048805
CSRT
0.635118244087796
Interpretation
Uncertain
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