Gene

KWMTBOMO09291

Pre Gene Modal

BGIBMGA003312

Annotation

PREDICTED:_uncharacterized_protein_LOC106111152_[Papilio_polytes]

Location

Bomo_Chr15(-):15340990-15351010      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.506 Mitochondrial   Reliability : 1.077 Nuclear   Reliability : 1.715

CDS

ATGCAATCAAAAACAAGATACGAGATTTATTTAGCAACAGCAGTTCTTGCTGTAGGGGCAGTAACATATTTATTTTGGAAACGGAAAAGCCGACTTCTAGACGCTGTTGATGCTTTTTCGTATATAAATATCAAAATTGCCACTAATGAAAGAAATTGCGACGAAGCGGTCAATGAATTACGAAGGCGATGCTGTGACTACAATGCTTTAGGATTTGACTGTGAATGGGTGACAGATCACGGAAAAAGAAAGCCAGTTGCACTGGTACAATTATCATCATCTGATGGCCTGTGTTGCTTGTTCAGGCTTAGTTCAATGGAAACTATACCTAATTCTTTAAAGGATCTCTTAGAAGATGAAAAAATCTATAAAGTTGGAGTAGCAGCAAATGATGATGGAAAATATCTGTTCCAAGATTATTCAGTGAAGTTGAAGTCTACATTAGATGTAAGATATCTAGCAGAACTATGTGGACTAGAGCCAGGTGGTCTTGCAGTTTTATCCAAGAACCTACTGCGAATTGTCTTGGATAAGAGTTGGAGGATTCGTTGCAGTAACTGGGAAGCTGATGAACTGACGGTCAAGCAAAAACAATACGCTGCTGCTGATGCTCATGTAGCCATCAAGATATTTGAATATTTGCTGAAAGAATACCGTTTCAAATCTATGATGAAGGATCTGTTAAGATTATCAAAGAAGCTAAGCGTAGATGACATCTGCCAAAAATATGCTGATATTGGATTCAAGCAGAAGAGCAGAAAAGTTGCAGGAGACATCCCTAAAGAGTCGAAGCTTAAAGACGTAAGAGTAAGCAAGAGGTATGTCCTCCGTTCTAAGCCATTGTATCAGAATTGTTTCCTACAAGCACCCGATGGAGACTTATTGTGTACATGCGATAACAAGAAAGCTTTGTGGTACGTGGACAAGGGTCTGGCGGAGGTGGTGGGGGGCGAGCCTCTGACGGTGCGGCTGCGGTTCGAGCCGGCGGGCCGCTCGGTGGGCGAGGTGGGCCGCTACTACGCGCAGCCCAAGGCGAACAGGTGCGTCGTCTGCGGCGCCACCAACTCCTACATACGGAAGAACGTCGTGCCCAGGGAGTACAGGAAGTATTTCCCGGAAATAATGAAGGAGCACTCGTCCCACGACGTGGTGCTGCTGTGTGCGGCGTGCCACCAGCGCAGCAACGCGCGCGACCAGGCCGTGCGGGCGCGCCTGGCCGAGCGCGCGCGGGCGCCGCTGCCCGCCGCCGACAACGCCAGGGAGACGCTCGACGTGCGCAAAAAAAAAGTGAAGTCTGCTGCCAACGCGTTGCTTTACCAATCGCAGAAGCACGAGCTGCCAGAGGAGAGGCGGAAGGTGCTAGAACAGATCATCCTCGATTACTACCCTCAACATAAGGAGGTCTCCGAGGACGTACTGAAGGAAGCGGTCGAGCTGTGTGTCGTCCAAGAAAATGTCGATTATGAATCTCACGGAATGAAGGTTGTTGAATATTTCTCTAAACGCGACGGCGGTCTGCTCGCTCTGGAGCAGATGTGGCGGGAACATTTCATAAATGTCATGAAGCCTAATTATTTGCCTGATCTGTGGTCCGTCAAACACAACGAAGAGAGGTTGTGGATAAAATGGAGTGAGGGAAGATTATCAGAAAATGATCTCAAAGTTATTGGCGCCAGGTGGTCTTGA

Protein

MQSKTRYEIYLATAVLAVGAVTYLFWKRKSRLLDAVDAFSYINIKIATNERNCDEAVNELRRRCCDYNALGFDCEWVTDHGKRKPVALVQLSSSDGLCCLFRLSSMETIPNSLKDLLEDEKIYKVGVAANDDGKYLFQDYSVKLKSTLDVRYLAELCGLEPGGLAVLSKNLLRIVLDKSWRIRCSNWEADELTVKQKQYAAADAHVAIKIFEYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCFLQAPDGDLLCTCDNKKALWYVDKGLAEVVGGEPLTVRLRFEPAGRSVGEVGRYYAQPKANRCVVCGATNSYIRKNVVPREYRKYFPEIMKEHSSHDVVLLCAACHQRSNARDQAVRARLAERARAPLPAADNARETLDVRKKKVKSAANALLYQSQKHELPEERRKVLEQIILDYYPQHKEVSEDVLKEAVELCVVQENVDYESHGMKVVEYFSKRDGGLLALEQMWREHFINVMKPNYLPDLWSVKHNEERLWIKWSEGRLSENDLKVIGARWS

Uniprot

H9J1C5   A0A194RKG0   A0A194PJK6   A0A2A4J963   A0A2H1VSX8   A0A437BNV7   + More
A0A1I8PS54   A0A336JZY7   A0A0K8VNG2   A0A0A1XM69   A0A034V797   A0A1A9VIA7   T1PJA3   A0A1I8M6E0   A0A1A9XU78   A0A1B0GFE9   D3TNA4   Q16LC6   W8BM66   U5ESD1   A0A1A9ZM47   A0A2M3ZHW2   A0A1W4WC38   Q295A4   A0A1L8DYG3   B3LXB7   A0A1B0CQN3   B4GMD5   A0A2M4ACV0   A0A2M4ADV1   A0A1B0BNC6   A0A3B0KP56   W8B176   B0WTA6   A0A182FRF3   A0A182YAF2   A0A2M4BE16   A0A2M4BE29   A0A182PGU8   A0A2M4BE22   B4PM58   A0A1B0D7X2   W8BC93   W5J2L0   B4NAX0   A0A084VTA0   B4JUN9   A0A2J7PEM0   B4HI24   A0A182R4V5   A0A182JVH6   Q9VGN7   A0A067QRJ3   A0A182NQG3   A0A0M4EDE2   A0A182VWI9   A0A182MKW4   A0A182ILT0   Q7PXS8   A0A182UUJ4   A0A182HL65   A0A182WSB3   A0A1Y9INB7   B3NZE7   A0A1J1HU97   B4KDZ0   B4M5C8   A0A2A3EDU6   A0A0N0U7A4   A0A0L7QKL7   A0A088AEX8   A0A310S4F2   A0A232F2M0   A0A151IDE5   A0A151WEB5   B7PNL2   A0A158NSL7   F4WJL6   E2AUP8   A0A195FGL9   A0A293M8C8   A0A154PFG7   A0A026WI19   A0A3L8E0Q0   K7J2B1   E9IAI9   A0A0C9R4Z6   A0A2P8YTM5   A0A1Z5LAX4   A0A423U5B5   A0A182SU42   A0A0N8AH87   A0A0P5ZGQ8   A0A0P5E0X5   A0A0P4ZYB8   A0A0P4ZHK7   A0A0N8BLV3  

Pubmed

19121390    26354079    25830018    25348373    25315136    20353571    + More
17510324    24495485    15632085    17994087    25244985    17550304    20920257    23761445    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    12364791    14747013    17210077    28648823    21347285    21719571    20798317    24508170    30249741    20075255    21282665    29403074    28528879   

EMBL

BABH01023964    KQ460106    KPJ17820.1    KQ459602    KPI93606.1    NWSH01002527    + More
PCG68074.1    ODYU01004261    SOQ43945.1    RSAL01000026    RVE52065.1    UFQS01000011    UFQT01000011    SSW97192.1    SSX17578.1    GDHF01011890    JAI40424.1    GBXI01002191    JAD12101.1    GAKP01020955    GAKP01020953    JAC37997.1    KA647978    AFP62607.1    CCAG010002231    EZ422906    ADD19182.1    CH477910    EAT35135.1    GAMC01015786    JAB90769.1    GANO01003299    JAB56572.1    GGFM01007267    MBW28018.1    CM000070    EAL28808.2    GFDF01002779    JAV11305.1    CH902617    EDV42761.1    AJWK01023776    AJWK01023777    CH479185    EDW38009.1    GGFK01005293    MBW38614.1    GGFK01005645    MBW38966.1    JXJN01017334    OUUW01000014    SPP88399.1    GAMC01015782    JAB90773.1    DS232083    EDS34334.1    GGFJ01002155    MBW51296.1    GGFJ01002153    MBW51294.1    GGFJ01002154    MBW51295.1    CM000160    EDW96924.1    AJVK01032324    GAMC01015784    JAB90771.1    ADMH02002131    ETN58507.1    CH964232    EDW80934.2    ATLV01016287    KE525074    KFB41194.1    CH916374    EDV91209.1    NEVH01026094    PNF14768.1    CH480815    EDW42606.1    AE014297    AY089433    AAF54639.2    AAL90171.1    KK853419    KDR07728.1    CP012526    ALC45804.1    AXCM01012379    AAAB01008987    EAA01810.5    APCN01000881    CH954181    EDV49520.1    CVRI01000020    CRK91130.1    CH933806    EDW16011.1    CH940652    EDW59839.2    KZ288287    PBC29399.1    KQ435710    KOX79808.1    KQ414940    KOC59183.1    KQ777939    OAD52035.1    NNAY01001181    OXU24832.1    KQ977963    KYM98421.1    KQ983238    KYQ46213.1    ABJB011057098    DS753583    EEC08184.1    ADTU01000413    GL888184    EGI65632.1    GL442872    EFN62847.1    KQ981606    KYN39538.1    GFWV01012295    MAA37024.1    KQ434892    KZC10552.1    KK107193    EZA55697.1    QOIP01000002    RLU26073.1    AAZX01001589    GL762022    EFZ22421.1    GBYB01001916    JAG71683.1    PYGN01000366    PSN47595.1    GFJQ02002424    JAW04546.1    QCYY01000630    ROT83879.1    GDIP01147641    JAJ75761.1    GDIP01044843    JAM58872.1    GDIP01148891    JAJ74511.1    GDIP01206427    JAJ16975.1    GDIP01225980    JAI97421.1    GDIQ01165035    JAK86690.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000283053    UP000095300    + More
UP000078200    UP000095301    UP000092443    UP000092444    UP000008820    UP000092445    UP000192221    UP000001819    UP000007801    UP000092461    UP000008744    UP000092460    UP000268350    UP000002320    UP000069272    UP000076408    UP000075885    UP000002282    UP000092462    UP000000673    UP000007798    UP000030765    UP000001070    UP000235965    UP000001292    UP000075900    UP000075881    UP000000803    UP000027135    UP000075884    UP000092553    UP000075920    UP000075883    UP000075880    UP000007062    UP000075903    UP000075840    UP000076407    UP000075902    UP000008711    UP000183832    UP000009192    UP000008792    UP000242457    UP000053105    UP000053825    UP000005203    UP000215335    UP000078542    UP000075809    UP000001555    UP000005205    UP000007755    UP000000311    UP000078541    UP000076502    UP000053097    UP000279307    UP000002358    UP000245037    UP000283509    UP000075901   

PRIDE

H9J1C5    Q9VGN7   

Pfam

PF01612   DNA_pol_A_exo1        + More
PF00089   Trypsin

Interpro

IPR012337   RNaseH-like_sf        + More
IPR002562   3'-5'_exonuclease_dom       
IPR036397   RNaseH_sf       
IPR001254   Trypsin_dom       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR036179   Ig-like_dom_sf       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       

SUPFAM

SSF53098   SSF53098        + More
SSF50494   SSF50494       
SSF48726   SSF48726       

Gene 3D

3.30.420.10     2.60.40.10    

CDD

cd00190  Tryp_SPc

ProteinModelPortal

H9J1C5   A0A194RKG0   A0A194PJK6   A0A2A4J963   A0A2H1VSX8   A0A437BNV7   + More
A0A1I8PS54   A0A336JZY7   A0A0K8VNG2   A0A0A1XM69   A0A034V797   A0A1A9VIA7   T1PJA3   A0A1I8M6E0   A0A1A9XU78   A0A1B0GFE9   D3TNA4   Q16LC6   W8BM66   U5ESD1   A0A1A9ZM47   A0A2M3ZHW2   A0A1W4WC38   Q295A4   A0A1L8DYG3   B3LXB7   A0A1B0CQN3   B4GMD5   A0A2M4ACV0   A0A2M4ADV1   A0A1B0BNC6   A0A3B0KP56   W8B176   B0WTA6   A0A182FRF3   A0A182YAF2   A0A2M4BE16   A0A2M4BE29   A0A182PGU8   A0A2M4BE22   B4PM58   A0A1B0D7X2   W8BC93   W5J2L0   B4NAX0   A0A084VTA0   B4JUN9   A0A2J7PEM0   B4HI24   A0A182R4V5   A0A182JVH6   Q9VGN7   A0A067QRJ3   A0A182NQG3   A0A0M4EDE2   A0A182VWI9   A0A182MKW4   A0A182ILT0   Q7PXS8   A0A182UUJ4   A0A182HL65   A0A182WSB3   A0A1Y9INB7   B3NZE7   A0A1J1HU97   B4KDZ0   B4M5C8   A0A2A3EDU6   A0A0N0U7A4   A0A0L7QKL7   A0A088AEX8   A0A310S4F2   A0A232F2M0   A0A151IDE5   A0A151WEB5   B7PNL2   A0A158NSL7   F4WJL6   E2AUP8   A0A195FGL9   A0A293M8C8   A0A154PFG7   A0A026WI19   A0A3L8E0Q0   K7J2B1   E9IAI9   A0A0C9R4Z6   A0A2P8YTM5   A0A1Z5LAX4   A0A423U5B5   A0A182SU42   A0A0N8AH87   A0A0P5ZGQ8   A0A0P5E0X5   A0A0P4ZYB8   A0A0P4ZHK7   A0A0N8BLV3  

PDB

6K1E     E-value=6.00492e-29,     Score=319

KEGG

101737619    K20777 exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1] | (RefSeq) exonuclease 3'-5' doma

GO

GO:0003676   GO:0008408   GO:0016021   GO:0070131   GO:0005739   GO:0016444   GO:0000175   GO:0005737   GO:0004252   GO:0006139   GO:0009190   GO:0016849   GO:0000166   GO:0046872   GO:0016020   GO:0016876   GO:0043039  

Length:

561

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.56773

Exp number, first 60 AAs:

19.567

Total prob of N-in:

0.99826

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  26

outside

27  -  561

 

 

Pi

174.285279

Theta

160.704764

Tajima's D

0.584296

CLR

2.286228

CSRT

0.539573021348933

Interpretation

Uncertain