Gene

KWMTBOMO09289  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003428

Annotation

PREDICTED:_dolichyl-diphosphooligosaccharide--protein_glycosyltransferase_subunit_STT3A_[Papilio_machaon]

Location

Bomo_Chr15(+):15320151-15332470      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.949

CDS

ATGACGGCGGAAACACAGAGCAAGTCCAGATTACCGTATTTGTCTTCGGACAAACAACTAACATTTATAAAACTCTCTGTATTGTCAATGGCAGCAATTTTATCTTTTGCGACGCGTTTATTCTCCGTTCTGCGTTTTGAGAGCGTAATCCATGAGTTTGATCCCTACTTCAACTATAGAACGACGAGATATCTCACTGAAGAGGGATTTTATAACTTCCACAACTGGTTTGACGATAGAGCATGGTATCCTCTAGGTCGTATTATTGGAGGTACCATCTACCCTGGCCTGATGGTGACTTCTGCCACTCTTTACAATATAATGCAGTACTTAAACATAACAATTGACATCAGAAATGTATGTGTGTTCTTGGCTCCATTCTTCTCCTCACTCACAACTATTGTCACATACCTCCTTACCAAGGAGTTAAAGAATGAAGGAGCGGGCTTAGTGGCAGCAGCAATGATTGCAATCGTCCCTGGTTACATCAGTCGTTCAGTCGCAGGAAGCTATGATAATGAAGGCATCGCCATCTTCTGCATGCTGCTGACTTATTATTTTTGGATCAAAGCTGTTAATACAGGAACTATCATGTGGGCAACTATGACGGCTCTGGCATATTTCTACATGGTGTCATCATGGGGTGGCTACGTTTTCCTCATAAACCTGATACCGTTGCACGTACTGGCCCTCATTCTGCTGGGAAGGTTCTCGTCGAGGGTGTACGTGGCTTACAGCACGCTGTACTGCATCGGAACCATCCTCTCAATGCAGATTTCTTTTGTGGGCTTCCAACCGGTGCAGAGTTCGGAGCATATGTTGGCTCTCGGTACATTCGGGCTGTGTCAGCTGTACGCGTTCACGCAGTACCTCAGACAACATCTGTCGCCGGCTAACTTCGAGCTGCTCTTCAAGGCTCTTGTTACAACGCTGCTTCTGACCCTGGGCTCTGCTATCATAGCCCTCACTTTGACCGGAAAAATCTCACCGTGGACTGGCCGTTTCTACTCATTGCTCGATCCATCGTACGCTAAGAACCACATTCCTATCATTGCATCCGTGTCCGAGCATCAGCCCACGTCGTGGTCATCATTCTACTTCGACCTCCAAGTCCTGGTGTTCCTGTTCCCGGCTGGACTGTACTTTTGCTTTAGCAAGCTCACGGATGCAAACATATTCATCATTCTGTATGGTGTGCTCAGTATATACTTTGCTGGCGTCATGGTTCGTCTTATGCTGGTACTCGCTCCGGTCATGTGCATCGTCTCCGGTATAGCAGCTTCCAGTCTACTTAGTCTTCACGTTAAGGATATTGAGCCTAAAGTTGAGAAACACGATAAGAAGAAGAAGCATGAAAATAATCTTGTGTTTAGATCTGAGGTGGGCACGTTGTTCGTGTGCGTGCTGGGCTGCCTGCTGGTGTCGTACGTGGTGCACTGCACGTGGGTCACGTCGGAGGCCTACTCGTCGCCCTCCATCGTGCTGTCGGCGCGCGCACACGACGGCGCCCGGATCATCTTCGACGACTTCCGCGAGGCCTACACCTGGCTCAAGATGAACACTCCAGAGGACGCCAAAGTGATGTCGTGGTGGGACTACGGCTACCAAATAACGGCGATGGCGAACCGGACGGTGATCGTCGACAACAACACGTGGAACAACACGCACATATCGCGCGTGGGGCAGGCGATGGCCTCCACCGAGGACAAGGCCTACGAGATCATGAGGGAGCTGGACGTGGACTACGTGCTCGTCATCTTCGGAGGACTGGTCGGATACTCTTCGGACGACATCAACAAGTTCCTGTGGATGGTGCGCATCGGCGGCAGCACGGAGCGCGGCGCGCACATCCGCGAGGCGCAGTACTACACGGCGGCCGGGGAGTTCCGCGTGGACTCGGCCGGCGCGCCCGCGCTGCTCAACTGCCTCATGTACAAGATGAGCTACTACAAGTTCGGACTCGTCTACACGGAGGGCGGCCGGCCGCCAGGGTTCGATCGGGTTCGAGGAGCTGAGATCGGCAACAAGGACTTCAATCTAGATGTTCTAGAGGAAGCCTACACGACAGAACATTGGCTGGTCCGCATTTACAAAGTCAAACCTTTGCCGAACAGGGGAGTATAA

Protein

MTAETQSKSRLPYLSSDKQLTFIKLSVLSMAAILSFATRLFSVLRFESVIHEFDPYFNYRTTRYLTEEGFYNFHNWFDDRAWYPLGRIIGGTIYPGLMVTSATLYNIMQYLNITIDIRNVCVFLAPFFSSLTTIVTYLLTKELKNEGAGLVAAAMIAIVPGYISRSVAGSYDNEGIAIFCMLLTYYFWIKAVNTGTIMWATMTALAYFYMVSSWGGYVFLINLIPLHVLALILLGRFSSRVYVAYSTLYCIGTILSMQISFVGFQPVQSSEHMLALGTFGLCQLYAFTQYLRQHLSPANFELLFKALVTTLLLTLGSAIIALTLTGKISPWTGRFYSLLDPSYAKNHIPIIASVSEHQPTSWSSFYFDLQVLVFLFPAGLYFCFSKLTDANIFIILYGVLSIYFAGVMVRLMLVLAPVMCIVSGIAASSLLSLHVKDIEPKVEKHDKKKKHENNLVFRSEVGTLFVCVLGCLLVSYVVHCTWVTSEAYSSPSIVLSARAHDGARIIFDDFREAYTWLKMNTPEDAKVMSWWDYGYQITAMANRTVIVDNNTWNNTHISRVGQAMASTEDKAYEIMRELDVDYVLVIFGGLVGYSSDDINKFLWMVRIGGSTERGAHIREAQYYTAAGEFRVDSAGAPALLNCLMYKMSYYKFGLVYTEGGRPPGFDRVRGAEIGNKDFNLDVLEEAYTTEHWLVRIYKVKPLPNRGV

Uniprot

H9J1P1   A0A194RJU0   A0A2W1BVJ8   A0A194PKS6   A0A3S2M5U2   A0A2A4J9P5   + More
A0A2H1VSY6   A0A212EGW9   A0A1B6HC36   S4NTV6   A0A067RGL4   A0A2J7PE11   A0A224XKS3   A0A0N7Z980   A0A069DWJ8   R4FP94   A0A0A9YZB0   A0A023F931   A0A1Y1LEM1   A0A1B6DKE0   A0A0K8TMR8   Q17DE3   A0A1Q3F4A6   A0A0A1WZY7   A0A0K8UYU3   A0A034VB92   A0A182HAS4   A0A1A9UEI2   A0A1B0ADN2   A0A0P6CDI1   A0A1B0FQ19   A0A0L0BMJ6   E9G6L8   A0A0P5FVY6   A0A3R7QMB5   W5JFC1   A0A182IY80   A0A0N8AY16   A0A061QLL8   A0A0P5Q7K3   A0A0P5NU05   A0A182W5G6   A0A1A9XSL1   A0A1B0AQG1   B4PYM0   B3NY63   W8BAI9   B3DN57   B4L8Q4   Q9VRE0   A0A084VLE4   U5EW59   A0A0N8DUS9   A0A1A9W8N8   A0A182RMW2   D6WKL9   A0A0N8EE82   A0A0P5QHP2   A0A026W473   A0A1W4VWQ0   A0A182XXU9   A0A1I8Q0G6   A0A0P6EJG1   B4NCR5   A0A182SYJ8   B4M1T6   A0A1I8MLD4   A0A182UEW2   Q7PS25   A0A182VGX2   B4I6D5   A0A182PBK1   A0A3L8E1R2   B3N0J0   A0A3B0J887   A0A0N0U4L1   A0A0P5IFR8   A0A1W4WSH1   B4JIP5   A0A182GQJ9   A0A087ZWD2   A0A310SNA2   F4W854   A0A195EYT6   A0A158NDQ5   A0A151X418   A0A0M5J0V3   A0A154PSC3   A0A0L7QV25   E2A0N1   A0A2M4A226   A0A034VC64   B5DNT0   A0A2R5LE35   A0A2A3ELE9   A0A293N280   A0A232FJU7   K7JBD1   A0A1B6L1G3   A0A0C9RC03  

Pubmed

19121390    26354079    28756777    22118469    23622113    24845553    + More
27129103    26334808    25401762    26823975    25474469    28004739    26369729    17510324    25830018    25348373    26483478    26108605    21292972    20920257    23761445    17994087    17550304    24495485    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24438588    18362917    19820115    24508170    25244985    25315136    12364791    14747013    17210077    30249741    21719571    21347285    20798317    15632085    23185243    28648823    20075255   

EMBL

BABH01023963    KQ460106    KPJ17817.1    KZ149923    PZC77654.1    KQ459602    + More
KPI93603.1    RSAL01000026    RVE52063.1    NWSH01002254    PCG68805.1    ODYU01004261    SOQ43943.1    AGBW02015002    OWR40733.1    GECU01035466    JAS72240.1    GAIX01012071    JAA80489.1    KK852696    KDR18262.1    NEVH01026112    PNF14573.1    GFTR01007795    JAW08631.1    GDKW01001291    JAI55304.1    GBGD01000673    JAC88216.1    ACPB03005610    GAHY01000994    JAA76516.1    GBHO01006080    GDHC01021415    JAG37524.1    JAP97213.1    GBBI01000731    JAC17981.1    GEZM01062156    GEZM01062155    JAV70006.1    GEDC01011139    JAS26159.1    GDAI01001956    JAI15647.1    CH477296    EAT44394.1    GFDL01012654    JAV22391.1    GBXI01010334    JAD03958.1    GDHF01026345    GDHF01021502    GDHF01020799    JAI25969.1    JAI30812.1    JAI31515.1    GAKP01019581    GAKP01019580    GAKP01019579    JAC39372.1    JXUM01031403    JXUM01031404    JXUM01031405    KQ560920    KXJ80345.1    GDIP01009873    LRGB01000512    JAM93842.1    KZS18894.1    CCAG010020168    JRES01001642    KNC21261.1    GL732533    EFX84969.1    GDIQ01253686    GDIQ01253685    GDIQ01250989    GDIQ01247842    GDIQ01247841    GDIQ01243801    GDIQ01190607    GDIQ01190606    GDIQ01187906    GDIQ01186358    GDIQ01184710    GDIQ01178204    GDIQ01169506    GDIQ01166911    GDIQ01155622    GDIQ01148333    GDIQ01146872    GDIQ01140885    GDIQ01132492    GDIQ01132491    GDIQ01129888    GDIQ01127245    GDIQ01125532    GDIQ01123678    GDIQ01119271    GDIQ01119270    GDIQ01113587    GDIQ01100842    GDIQ01099431    GDIQ01099430    GDIQ01087842    GDIQ01087841    GDIQ01084602    GDIQ01079936    GDIQ01077987    GDIQ01050966    GDIQ01050965    GDIQ01049714    GDIQ01048211    GDIQ01046460    GDIQ01044469    JAK00736.1    QCYY01000659    ROT83643.1    ADMH02001666    ETN61504.1    GDIQ01231731    JAK19994.1    GBFC01000029    JAC59309.1    GDIQ01121085    GDIQ01121084    JAL30641.1    GDIQ01137774    JAL13952.1    JXJN01001849    JXJN01001850    CM000162    EDX03061.1    CH954180    EDV47584.1    GAMC01016454    GAMC01016453    JAB90101.1    BT032845    ACD81859.1    CH933815    EDW08029.1    KRG07558.1    KRG07559.1    AE014298    AAF50861.1    AGB95589.2    ATLV01014483    KE524974    KFB38788.1    GANO01001569    JAB58302.1    GDIQ01089836    JAN04901.1    KQ971342    EFA03010.1    GDIQ01035412    JAN59325.1    GDIQ01135120    JAL16606.1    KK107436    EZA50852.1    GDIQ01075487    JAN19250.1    CH964239    EDW82624.1    CH940651    EDW65640.1    AAAB01008846    EAA06273.4    CH480823    EDW56341.1    QOIP01000002    RLU26129.1    CH902640    EDV38394.1    OUUW01000003    SPP78055.1    KQ435821    KOX72428.1    GDIQ01214001    JAK37724.1    CH916370    EDW00492.1    JXUM01080880    JXUM01080881    KQ563214    KXJ74280.1    KQ759851    OAD62552.1    GL887888    EGI69724.1    KQ981906    KYN33291.1    ADTU01012795    KQ982548    KYQ55163.1    CP012528    ALC48548.1    KQ435127    KZC14801.1    KQ414727    KOC62475.1    GL435626    EFN72934.1    GGFK01001484    MBW34805.1    GAKP01019582    JAC39370.1    CH379065    EDY73182.1    KRT07199.1    GGLE01003620    MBY07746.1    KZ288215    PBC32548.1    GFWV01022456    MAA47183.1    NNAY01000097    OXU31004.1    AAZX01003235    AAZX01010155    AAZX01012906    GEBQ01022482    JAT17495.1    GBYB01008133    GBYB01014114    JAG77900.1    JAG83881.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000218220    UP000007151    + More
UP000027135    UP000235965    UP000015103    UP000008820    UP000069940    UP000249989    UP000078200    UP000092445    UP000076858    UP000092444    UP000037069    UP000000305    UP000283509    UP000000673    UP000075880    UP000075920    UP000092443    UP000092460    UP000002282    UP000008711    UP000009192    UP000000803    UP000030765    UP000091820    UP000075900    UP000007266    UP000053097    UP000192221    UP000076408    UP000095300    UP000007798    UP000075901    UP000008792    UP000095301    UP000075902    UP000007062    UP000075903    UP000001292    UP000075885    UP000279307    UP000007801    UP000268350    UP000053105    UP000192223    UP000001070    UP000005203    UP000007755    UP000078541    UP000005205    UP000075809    UP000092553    UP000076502    UP000053825    UP000000311    UP000001819    UP000242457    UP000215335    UP000002358   

PRIDE

H9J1P1    B3DN57    Q9VRE0   

Pfam

PF02516   STT3

Interpro

IPR003674   Oligo_trans_STT3       

ProteinModelPortal

H9J1P1   A0A194RJU0   A0A2W1BVJ8   A0A194PKS6   A0A3S2M5U2   A0A2A4J9P5   + More
A0A2H1VSY6   A0A212EGW9   A0A1B6HC36   S4NTV6   A0A067RGL4   A0A2J7PE11   A0A224XKS3   A0A0N7Z980   A0A069DWJ8   R4FP94   A0A0A9YZB0   A0A023F931   A0A1Y1LEM1   A0A1B6DKE0   A0A0K8TMR8   Q17DE3   A0A1Q3F4A6   A0A0A1WZY7   A0A0K8UYU3   A0A034VB92   A0A182HAS4   A0A1A9UEI2   A0A1B0ADN2   A0A0P6CDI1   A0A1B0FQ19   A0A0L0BMJ6   E9G6L8   A0A0P5FVY6   A0A3R7QMB5   W5JFC1   A0A182IY80   A0A0N8AY16   A0A061QLL8   A0A0P5Q7K3   A0A0P5NU05   A0A182W5G6   A0A1A9XSL1   A0A1B0AQG1   B4PYM0   B3NY63   W8BAI9   B3DN57   B4L8Q4   Q9VRE0   A0A084VLE4   U5EW59   A0A0N8DUS9   A0A1A9W8N8   A0A182RMW2   D6WKL9   A0A0N8EE82   A0A0P5QHP2   A0A026W473   A0A1W4VWQ0   A0A182XXU9   A0A1I8Q0G6   A0A0P6EJG1   B4NCR5   A0A182SYJ8   B4M1T6   A0A1I8MLD4   A0A182UEW2   Q7PS25   A0A182VGX2   B4I6D5   A0A182PBK1   A0A3L8E1R2   B3N0J0   A0A3B0J887   A0A0N0U4L1   A0A0P5IFR8   A0A1W4WSH1   B4JIP5   A0A182GQJ9   A0A087ZWD2   A0A310SNA2   F4W854   A0A195EYT6   A0A158NDQ5   A0A151X418   A0A0M5J0V3   A0A154PSC3   A0A0L7QV25   E2A0N1   A0A2M4A226   A0A034VC64   B5DNT0   A0A2R5LE35   A0A2A3ELE9   A0A293N280   A0A232FJU7   K7JBD1   A0A1B6L1G3   A0A0C9RC03  

PDB

6FTI     E-value=0,     Score=2642

KEGG

101737095    K07151 dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] | (RefSeq) dol

PATHWAY

00510    N-Glycan biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0006486   GO:0004576   GO:0016021   GO:0016740   GO:0012505   GO:0016020   GO:0009190   GO:0016849   GO:0000166   GO:0046872   GO:0016876   GO:0043039  

Length:

707

Number of predicted TMHs:

13

Exp number of AAs in TMHs:

280.60402

Exp number, first 60 AAs:

21.90087

Total prob of N-in:

0.99686

POSSIBLE N-term signal

sequence

inside

1  -  20

TMhelix

21  -  43

outside

44  -  84

TMhelix

85  -  107

inside

108  -  119

TMhelix

120  -  137

outside

138  -  146

TMhelix

147  -  169

inside

170  -  175

TMhelix

176  -  198

outside

199  -  212

TMhelix

213  -  235

inside

236  -  241

TMhelix

242  -  264

outside

265  -  273

TMhelix

274  -  291

inside

292  -  302

TMhelix

303  -  325

outside

326  -  365

TMhelix

366  -  385

inside

386  -  391

TMhelix

392  -  409

outside

410  -  412

TMhelix

413  -  435

inside

436  -  455

TMhelix

456  -  478

outside

479  -  707

 

 

Pi

260.091819

Theta

155.641224

Tajima's D

2.439144

CLR

0.326568

CSRT

0.936503174841258

Interpretation

Uncertain