Gene

KWMTBOMO09286

Pre Gene Modal

BGIBMGA012392

Annotation

hypothetical_protein_RR46_02347_[Papilio_xuthus]

Location

Bomo_Chr15(+):15155545-15156047      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.618 Nuclear   Reliability : 2.013

CDS

ATGTGTGGAGTAACGAGAATGGATAGAATACGGAATGAATATGTTAGAGGAAGTCTGAAAGTGGCACCTGTGACAGAGAAGCTGAGAATTGCGCGTTTGGGATGGTATGGATATGTGATGAGAGATGAAAATGAGGTTGGTAAGAAAATGTTAACTATGAATGTGGAAAGATATAGAGGAGGAGGTAGACCTAAGAAGAAATGGATGGATTGCGTGAAAGACGATATGGGTAAGAGGAGAGTGAGCGAGGAAATGGTATATGATAGAAGAGTATGGGAGGAGAAAACATGTTGCGCCGACCCCAGGTAA

Protein

MCGVTRMDRIRNEYVRGSLKVAPVTEKLRIARLGWYGYVMRDENEVGKKMLTMNVERYRGGGRPKKKWMDCVKDDMGKRRVSEEMVYDRRVWEEKTCCADPR

Uniprot

A0A2A4JJS9   A0A2A4IZ11   A0A2W1BR99   A0A2W1BM48   A0A2W1BN03   A0A194Q6W3   + More
A0A3Q0JQ03   A0A0C2FK24   A0A016U5Z2   A0A016WMJ7   A0A016SZZ3   A0A016TRL9   A0A3Q0ISK7   A0A016SQS9   A0A183GPW8   A0A3P8ETQ0   A0A016UG54   A0A183F5G0   A0A3P7X1W4   A0A016VX07   A0A016SNG4   A0A016VGR4   H3A9W7   A0A016UE98   A0A3B3HPR4   A0A016WUN5   A0A016SDN2   A0A016S2P3   A0A016TVA5   A0A016WWY5   A0A016U6S3   A0A3B3BCY6   A0A016SEV2   A0A3B3IC33   A0A3P9IMA9   A0A016TKL4   A0A016SMN3   A0A3B3HQB6   H3AQJ4   A0A3B3HS69   A0A3P9J281   A0A3Q1JGK5   A0A2W1BIS5   A0A1S4DR42   A0A183GQD2   A0A3P8HXE7   D7F169   A0A3P9IVQ2   A0A183G528   A0A3P8E2T0   A0A3P9K1J1   A0A3P9MAU2   A0A3B3HQU7   A0A3B3I8S7   A0A3Q1HIZ5   A0A3P9K4Q4   A0A3B3IP13   A0A3P9IV37   H2MG20   A0A3P9JAC7   A0A3P9JDN6   A0A3P9I3Z4   A0A3B3HJS0   A0A3P9K727   A0A3B3I636   A0A3P9IJG8   A0A3P9IV13   A0A3B3IM16   A0A3B3HGK1   A0A3P9K097   A0A3B3H692   A0A3B3HFD6   A0A3P9J399   A0A3B3HUR5   A0A3B3HF03   A0A3B3ILR3   A0A3B3H3C9   A0A3P9H708   A0A3P9HH58   A0A3P9L6C8   A0A3B3HUW2   A0A3B3HXS2   A0A3B3INX9   A0A3B3HE53   A0A3P9GZZ6   A0A3B3IQ24   A0A3B3HJZ3   A0A3P9KEZ0   A0A3P9H8W7   A0A3B3H6E8   A0A3B3H5B4   A0A3P9J700   A0A3B3IJZ5   A0A3B3H3Q1   A0A3B3HVS1   A0A3P9MDZ4   A0A3P9M3G7   A0A3B3IEM9   A0A3B3I5K2   A0A3B3HP42  

Pubmed

28756777    26354079    25730766    9215903    17554307    29451363    + More
24807620    20470440   

EMBL

NWSH01001232    PCG72026.1    NWSH01004369    PCG65177.1    KZ150002    PZC75290.1    + More
KZ150032    PZC74715.1    KZ150034    PZC74657.1    KQ459581    KPI99130.1    KN768094    KIH47114.1    JARK01001507    JARK01001392    JARK01001372    EYB94492.1    EYC10272.1    EYC15469.1    JARK01000211    EYC40482.1    JARK01001491    EYB95904.1    JARK01001420    EYC05028.1    JARK01001524    EYB92930.1    UZAH01036764    VDP46995.1    JARK01001379    EYC13548.1    UZAH01001522    VDO19785.1    JARK01001340    EYC31308.1    JARK01001532    EYB92233.1    JARK01001346    EYC26580.1    AFYH01208402    JARK01001380    EYC13251.1    JARK01000095    EYC43385.1    JARK01001582    EYB88451.1    JARK01001646    EYB84786.1    JARK01001410    EYC06740.1    JARK01000073    EYC44076.1    JARK01001389    EYC10880.1    JARK01001577    EYB88829.1    JARK01001431    EYC03231.1    EYC10881.1    EYC15468.1    JARK01001540    EYB91592.1    AFYH01190171    KZ150166    PZC72650.1    UZAH01037041    VDP47936.1    FJ265554    ADI61822.1    UZAH01029552    VDP06679.1   

Proteomes

UP000218220    UP000053268    UP000079169    UP000024635    UP000050761    UP000008672    + More
UP000001038    UP000261560    UP000265200    UP000265040    UP000084051    UP000265180   

PRIDE

D7F169   

Pfam

PF00078   RVT_1        + More
PF03372   Exo_endo_phos

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF46938   SSF46938       

Gene 3D

3.60.10.10     3.40.525.10    

ProteinModelPortal

A0A2A4JJS9   A0A2A4IZ11   A0A2W1BR99   A0A2W1BM48   A0A2W1BN03   A0A194Q6W3   + More
A0A3Q0JQ03   A0A0C2FK24   A0A016U5Z2   A0A016WMJ7   A0A016SZZ3   A0A016TRL9   A0A3Q0ISK7   A0A016SQS9   A0A183GPW8   A0A3P8ETQ0   A0A016UG54   A0A183F5G0   A0A3P7X1W4   A0A016VX07   A0A016SNG4   A0A016VGR4   H3A9W7   A0A016UE98   A0A3B3HPR4   A0A016WUN5   A0A016SDN2   A0A016S2P3   A0A016TVA5   A0A016WWY5   A0A016U6S3   A0A3B3BCY6   A0A016SEV2   A0A3B3IC33   A0A3P9IMA9   A0A016TKL4   A0A016SMN3   A0A3B3HQB6   H3AQJ4   A0A3B3HS69   A0A3P9J281   A0A3Q1JGK5   A0A2W1BIS5   A0A1S4DR42   A0A183GQD2   A0A3P8HXE7   D7F169   A0A3P9IVQ2   A0A183G528   A0A3P8E2T0   A0A3P9K1J1   A0A3P9MAU2   A0A3B3HQU7   A0A3B3I8S7   A0A3Q1HIZ5   A0A3P9K4Q4   A0A3B3IP13   A0A3P9IV37   H2MG20   A0A3P9JAC7   A0A3P9JDN6   A0A3P9I3Z4   A0A3B3HJS0   A0A3P9K727   A0A3B3I636   A0A3P9IJG8   A0A3P9IV13   A0A3B3IM16   A0A3B3HGK1   A0A3P9K097   A0A3B3H692   A0A3B3HFD6   A0A3P9J399   A0A3B3HUR5   A0A3B3HF03   A0A3B3ILR3   A0A3B3H3C9   A0A3P9H708   A0A3P9HH58   A0A3P9L6C8   A0A3B3HUW2   A0A3B3HXS2   A0A3B3INX9   A0A3B3HE53   A0A3P9GZZ6   A0A3B3IQ24   A0A3B3HJZ3   A0A3P9KEZ0   A0A3P9H8W7   A0A3B3H6E8   A0A3B3H5B4   A0A3P9J700   A0A3B3IJZ5   A0A3B3H3Q1   A0A3B3HVS1   A0A3P9MDZ4   A0A3P9M3G7   A0A3B3IEM9   A0A3B3I5K2   A0A3B3HP42  

KEGG

101740536    no KO assigned | (RefSeq) uncharacterized LOC101740536

GO

GO:0016021   GO:0003964   GO:0004519  

Length:

102

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00063

Exp number, first 60 AAs:

0.00063

Total prob of N-in:

0.55053

inside

1  -  102

 

 

Pi

224.643112

Theta

139.658029

Tajima's D

1.912176

CLR

0.179621

CSRT

0.864856757162142

Interpretation

Uncertain