SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09283
Pre Gene Modal
BGIBMGA003425
Annotation
PREDICTED:_FERM?_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.439
 

Sequence

CDS
ATGAGAATGTGGCGTGAAGCAATTTTAGAGATTCTTAGATATGACGAATTATCACCCGAGGATGACAACACGCTCTCATCGGCGAGTCTCTGCATGTCCCCCAGTTCGACGTGCGAGCGTGATGTCGATCCGACGTCCGCGTCCGCTGCGTGCGCGCTCGCCATGTCCAACGGGCACGACGCGCTCGATAGCGCGCACCCTAAGGACGTCGATAAAAACGCTACCAGTGACGTCATCAATGGAAATGTTAACGTAAATATAGTATCCGAATCTACGAACAGTATGGAAGTGCTAAGCGGGGGGGAAAGCGACACGGGCGACACACTCACCAGGAAGAACAATAATAGCATATCTTCGAACATTTTGGGAACTCTGAAGGAGGAGGGCGGGCACGGCGCGGCGCGGCGACGCAGCGGTGACGTCACGTACTTCGTCGCCAAGGAGCTGCTCATGACCGAGCGGACCTACAAGCGGGACCTGGAGTACGTCACGGTCGTAAGTGATCTTTTGTTCTCACCCTCCAGTCGGGCGATAAATGGCTACCTGAAACCGGATATAGTAATCGGCAAACTTCTTGAGCAAATGACCTTGACTGCGCAGAACCGAATTTTAGGTCACTTTGGTGGTGAGGGTGAGGCGCGACGGCAGGGGAAATCGTATCGAGCGCGTTATTGGTAG
Protein
MRMWREAILEILRYDELSPEDDNTLSSASLCMSPSSTCERDVDPTSASAACALAMSNGHDALDSAHPKDVDKNATSDVINGNVNVNIVSESTNSMEVLSGGESDTGDTLTRKNNNSISSNILGTLKEEGGHGAARRRSGDVTYFVAKELLMTERTYKRDLEYVTVVSDLLFSPSSRAINGYLKPDIVIGKLLEQMTLTAQNRILGHFGGEGEARRQGKSYRARYW

Summary

Pfam
PF00169   PH
Interpro
IPR001849   PH_domain        + More
IPR011993   PH-like_dom_sf       
Gene 3D
ProteinModelPortal
PDB
4GYV     E-value=0.00273556,     Score=93

Ontologies

GO

Topology

Length:
225
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00314
Exp number, first 60 AAs:
0
Total prob of N-in:
0.14154
outside
1  -  225
 
 

Population Genetic Test Statistics

Pi
32.028929
Theta
178.816666
Tajima's D
-1.483357
CLR
27.149322
CSRT
0.0649467526623669
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号