SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09271
Pre Gene Modal
BGIBMGA003420
Annotation
PREDICTED:_protein_lifeguard_4-like_[Papilio_machaon]
Location in the cell
PlasmaMembrane   Reliability : 4.909
 

Sequence

CDS
ATGGCTTCGATACCTTTAATGTACGCCCAAGAAGACTGTGAACTAGGAGGGAAGGAATCTGTTGAGGATGACTTTGCATACCGCAACAATGTAATGAATGCTGAAAGGGAGATCCGTCTCGCCTTCATACGGAAAGTCTACGGTCTCCTGACAGTGCAGCTCCTGGCTACGGTCTCCATTGCGGCTGTATTTATGTTTGTTGAGCCCGTACAAACATTTATACACACCAATAATTGGATGATGATCATTGCTTTTATCCTAAGCATGGGAACTCTGATTGCATTGATCGTGAAACGACGCGATTCACCCGCCAATCTGTATCTCCTGGCTGCATTTACTGTTATCCAAGCGTACACCATCGGCGTTGTCGTGTCATACTACAACACCATGGTGGTGTTGCAAGCTCTGGCTTTAACATTCGCCGTCGTATTTTCTCTCACACTGTACACGCTTAACTCCAAACGGGACTTCTCATTCATTGGATACATGCTCGTAGCTGGTTTGACAGTTCTCATTTTGGGGGGTCTTCTTCAGCTGGTGGTGCAGAGCGCCGCCTTCGAAATGGCTCTGTCCATCGTCGGCGCGATATTCTTCAGCATGTTCCTCGTTTACGACACGCACCAGATGATGAGGGTCCTGTCTCCGGAGGAATACATCTTGGCAACCATCAATCTGTACTTGGACATTCTGAACCTATTCCTGTACATACTCAGAATTTTGAATGAGTTAAACAGGAATTAA
Protein
MASIPLMYAQEDCELGGKESVEDDFAYRNNVMNAEREIRLAFIRKVYGLLTVQLLATVSIAAVFMFVEPVQTFIHTNNWMMIIAFILSMGTLIALIVKRRDSPANLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYTLNSKRDFSFIGYMLVAGLTVLILGGLLQLVVQSAAFEMALSIVGAIFFSMFLVYDTHQMMRVLSPEEYILATINLYLDILNLFLYILRILNELNRN

Summary

Similarity
Belongs to the BI1 family.
EMBL
BABH01023929    BABH01023930    GAIX01012273    JAA80287.1    KQ460106    KPJ17803.1    + More
AK401531    KQ459602    BAM18153.1    KPI93590.1    AGBW02013658    OWR43037.1    ODYU01002928    SOQ41038.1    NWSH01000596    PCG75444.1    RSAL01000026    RVE52052.1    KQ971343    EFA03439.1    GEZM01004771    JAV96308.1    GL888334    EGI62530.1    KQ978231    KYM96099.1    KK107087    QOIP01000001    EZA59874.1    RLU27531.1    KQ980745    KYN13684.1    KQ982850    KYQ49934.1    ADTU01027489    KQ976529    KYM81784.1    KQ981940    KYN32686.1    GBYB01003697    JAG73464.1    GL438076    EFN69611.1    GL452546    EFN77089.1    NEVH01000260    PNF43759.1    LBMM01000170    KMR04637.1    APGK01041650    BT126561    KB740996    KB632380    AEE61525.1    ENN75893.1    ERL94142.1    NNAY01000426    OXU28494.1    AAZX01000576    GEFH01003911    JAP64670.1    GFTR01004035    JAW12391.1    GEMB01002804    JAS00394.1    GEBQ01026286    JAT13691.1    GFAC01000824    JAT98364.1    GBBL01001768    JAC25552.1    GBGD01002685    JAC86204.1    GBBK01003476    JAC21006.1    GBHO01008291    GBHO01001365    GBHO01001361    GBHO01001360    GBRD01013413    GDHC01013036    GDHC01012716    GDHC01012287    JAG35313.1    JAG42239.1    JAG42243.1    JAG42244.1    JAG52413.1    JAQ05593.1    JAQ05913.1    JAQ06342.1    GDKW01001346    JAI55249.1    ACPB03010198    GAHY01001170    JAA76340.1    BT076277    ACO10701.1    KQ428238    KOF66337.1    GECL01002931    JAP03193.1    GECZ01018386    GECZ01016885    JAS51383.1    JAS52884.1    GFJQ02004289    JAW02681.1    HACA01003411    CDW20772.1    BT080748    ACO15172.1    GECU01007925    GECU01002894    JAS99781.1    JAT04813.1    GFPF01008129    MAA19275.1    GEDV01007953    JAP80604.1    GACK01005854    JAA59180.1    MNPL01024483    OQR68515.1    GBBM01002291    JAC33127.1    JO843552    AEO35169.1    JO843553    AEO35170.1    GANP01002428    JAB82040.1    AK417823    BAN21038.1    GGLE01002475    MBY06601.1    GFWV01010362    MAA35091.1    HAAD01000992    CDG67224.1    IACF01002824    LAB68463.1    QCYY01003504    ROT63030.1    KB199981    ESP03537.1    DS469515    EDO48159.1    BC090219    CM004470    AAH90219.1    OCT88882.1    GG666494    EEN62665.1    MCFE01000207    ORX94353.1    JH431284    RQTK01000190    RUS84896.1    MRZV01000782    PIK44348.1    GU588711    ADO28667.1    GFFV01004116    JAV35829.1    JH000063    RAZU01000050    EGV95994.1    RLQ77641.1    MCFE01000018    ORY06187.1    NEDP02005055    OWF43586.1    GBXM01010076    JAH98501.1    AAGW02035141    JX052454    JX207300    JX208402    AFM85614.1    AFM86716.1    HACG01027126    CEK73991.1    GFAH01000326    JAV48063.1    RCHS01004290    RMX36581.1    LWLT01000005    ABQF01022450    JH170082    GEBF01005227    EHB08305.1    JAN98405.1    GABZ01007670    JAA45855.1    PZQS01000009    PVD24078.1    DQ213214    ACH43670.1    MUZQ01000054    OWK60725.1    QRBI01000112    RMC09993.1    BEZZ01000011    GCC22488.1    AMQN01011352    KB308842    ELT96382.1   
Pfam
PF01027   Bax1-I        + More
PF14677   FANCI_S3
PF14675   FANCI_S1
PF14679   FANCI_HD1
PF14680   FANCI_HD2
PF14676   FANCI_S2
PF14678   FANCI_S4
Interpro
IPR006214   Bax_inhibitor_1-related        + More
IPR029312   FANCI_HD2       
IPR029313   FANCI_S3       
IPR029310   FANCI_HD1       
IPR029315   FANCI_S2       
IPR029308   FANCI_S1       
IPR026171   FANCI       
IPR029314   FANCI_S4       
PDB
4PGW     E-value=2.79435e-06,     Score=120

Ontologies

Topology

Length:
246
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
149.74766
Exp number, first 60 AAs:
15.12943
Total prob of N-in:
0.99792
POSSIBLE N-term signal
sequence
inside
1  -  45
TMhelix
46  -  68
outside
69  -  77
TMhelix
78  -  97
inside
98  -  103
TMhelix
104  -  126
outside
127  -  129
TMhelix
130  -  152
inside
153  -  158
TMhelix
159  -  181
outside
182  -  184
TMhelix
185  -  204
inside
205  -  216
TMhelix
217  -  239
outside
240  -  246
 
 

Population Genetic Test Statistics

Pi
242.710928
Theta
175.506488
Tajima's D
1.034112
CLR
0.177513
CSRT
0.668816559172041
Interpretation
Uncertain
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