Gene

KWMTBOMO09270

Annotation

Uncharacterized_protein_OBRU01_02090_[Operophtera_brumata]

Location

Bomo_Chr15(+):14800065-14800945      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.347 Nuclear   Reliability : 1.78

CDS

ATGTCGCAATTATCTGCGATTGAGGTTGCTCAAAGAAACTTGGAAGAGTGCTTCACGAAAAGAATGGCCGATCTTGAGGCACAGCTTTATGCTGGAGGGCCTGCGAAGGATACAGTCTCCAAGGTTGCGGAGGAATTCCGAACATTCCGGGAACTTATATTCTCTATGTTGAAACTTCTTCGACAGCAGATTGGTGAGTGCACTCGACTGGTTGATGCGATCGAGACCAGACATCGTCGAAAAAACCTCATCTTTCTGGGAGTCCCTGAAGTTCAAAACGAAGACTGCACCGCTGCCATCTTGGATATTTTGCATAAAAAAATGCTTCTGAATACCTCTGCTGCTGACTTCAATGTGTGTCACCGTATAGGAGCTACTAATAAGGATCATCACCGCCCAATCCTGGTCAGATTGAAATGCTTAGATACACGGATGTCGATTTGGAGGACGAAGTCCAAACTTAAAGGTTCTCCTGTGTCCATCAAGGAATTCCTTACAAAATCTCGACAGGCGGTGTTCGGCAAGAGCCGTCAGTATTTTGGTGTGCGTCAATGTTGGACGCAAGACGGGGTCATTATTATCAAGGCTGCGGATGGAAGTCGTCACAGATTGACCACTATGGATGAGTTTAGCGACCTCGCAGTTAAATATCCTATTGTGGATGGTAAGCCAACATCAGCTAAGGGCAGCGTCTCTAAGGCGGCACCGGCTATCACTGTGAACTCGAAATTGCGGAAGACCTAG

Protein

MSQLSAIEVAQRNLEECFTKRMADLEAQLYAGGPAKDTVSKVAEEFRTFRELIFSMLKLLRQQIGECTRLVDAIETRHRRKNLIFLGVPEVQNEDCTAAILDILHKKMLLNTSAADFNVCHRIGATNKDHHRPILVRLKCLDTRMSIWRTKSKLKGSPVSIKEFLTKSRQAVFGKSRQYFGVRQCWTQDGVIIIKAADGSRHRLTTMDEFSDLAVKYPIVDGKPTSAKGSVSKAAPAITVNSKLRKT

Uniprot

A0A2A4JSS2   A0A2A4JVB8   A0A2A4J7K0   A0A2A4JIA9   A0A2A4JVW6   A0A2W1BKL8   + More
A0A2A4ISJ1   A0A2H1WT06   A0A0L7LT08   A0A2A4K0M9   A0A2W1BPW3   A0A2A4JP60   A0A2A4J0P1   A0A3S2N3S1   A0A2A4JPZ6   A0A2H1X0E0   A0A0L7LEM3   A0A0L7KPM5   A0A0L7K245   A0A2W1C1G2   H9JND1   A0A0L7KXD0   A0A2H1W7N3   A0A2W1B638   A0A0L7KIU7   A0A0L7L7Q1   A0A2A4JRK8   A0A0L7KDU3   A0A2A4JNA4   A0A0L7L318   A0A0L7KW56   A0A0L7LRK8   A0A0L7K490   A0A2W1AYL0   A0A2A4JAE4   A0A2A4JF70   A0A2H1W136   A0A2W1BHY6   A0A2H1VLT4   A0A0L7K1Y0   A0A437BDH8   A0A0L7KWV6   A0A0L7KMJ9   A0A0L7KZD4   A0A2A4JKL5   A0A2A4IZX0   A0A437B2M3   A0A1S3DR71   A0A3Q0J8Z8   S4PY07   A0A3Q0IRU1   R7T3K5   R7TZD7   A0A1B6MF41   A0A0L7LN09   R7V3F8   R7UQ06   R7VDX2   R7VIK4  

Pubmed

28756777    26227816    19121390    23622113    23254933   

EMBL

NWSH01000695    PCG74738.1    NWSH01000574    PCG75564.1    NWSH01002863    PCG67420.1    + More
NWSH01001465    PCG71162.1    PCG71163.1    NWSH01000512    PCG75926.1    KZ150083    PZC73827.1    NWSH01008089    PCG62701.1    ODYU01010789    SOQ56106.1    JTDY01000147    KOB78598.1    NWSH01000281    PCG77797.1    KZ149998    PZC75357.1    NWSH01000964    PCG73374.1    NWSH01004248    PCG65306.1    RSAL01001827    RVE40669.1    NWSH01000800    PCG74117.1    ODYU01012456    SOQ58773.1    JTDY01001444    KOB73845.1    JTDY01007405    KOB65227.1    JTDY01015832    KOB51930.1    KZ149916    PZC77943.1    BABH01019446    BABH01019447    BABH01019448    BABH01019449    BABH01019450    JTDY01004770    KOB67785.1    ODYU01006869    SOQ49099.1    KZ150731    PZC70355.1    JTDY01009601    KOB63242.1    JTDY01002460    KOB71369.1    NWSH01000709    PCG74665.1    JTDY01010087    KOB61249.1    KOB61251.1    NWSH01000981    PCG73266.1    JTDY01003374    KOB69654.1    JTDY01005020    KOB67468.1    JTDY01000235    KOB78128.1    JTDY01010801    JTDY01009435    KOB57999.1    KOB63512.1    KZ150737    PZC70349.1    NWSH01002122    PCG69097.1    NWSH01001639    PCG70611.1    ODYU01005692    SOQ46801.1    KZ150113    PZC73314.1    ODYU01003266    SOQ41795.1    JTDY01016995    KOB51870.1    RSAL01000083    RVE48435.1    JTDY01004815    JTDY01001265    KOB67717.1    KOB74342.1    JTDY01009052    KOB64154.1    JTDY01004162    KOB68510.1    NWSH01001172    PCG72268.1    NWSH01004711    PCG64730.1    RSAL01000191    RVE44670.1    GAIX01004118    JAA88442.1    AMQN01034318    KB312372    ELT87362.1    AMQN01026766    KB307322    ELT98997.1    GEBQ01005443    JAT34534.1    JTDY01000521    KOB76815.1    AMQN01039534    KB295512    ELU13084.1    AMQN01021863    KB299252    ELU08188.1    AMQN01017114    KB292747    ELU17043.1    AMQN01017617    KB293311    ELU16121.1   

Proteomes

UP000218220    UP000037510    UP000283053    UP000005204    UP000079169    UP000014760    + More

PRIDE

H9JND1   

Pfam

PF14529   Exo_endo_phos_2        + More
PF01582   TIR
PF00027   cNMP_binding
PF12931   Sec16_C

Interpro

IPR004244   Transposase_22        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR035897   Toll_tir_struct_dom_sf       
IPR000157   TIR_dom       
IPR000595   cNMP-bd_dom       
IPR014710   RmlC-like_jellyroll       
IPR018490   cNMP-bd-like       
IPR024298   ACE1_Sec16_Sec31       
IPR027417   P-loop_NTPase       

SUPFAM

SSF56219   SSF56219        + More
SSF52200   SSF52200       
SSF51206   SSF51206       
SSF52540   SSF52540       

Gene 3D

3.60.10.10     3.40.50.10140     2.60.120.10    

CDD

cd00038  CAP_ED

ProteinModelPortal

A0A2A4JSS2   A0A2A4JVB8   A0A2A4J7K0   A0A2A4JIA9   A0A2A4JVW6   A0A2W1BKL8   + More
A0A2A4ISJ1   A0A2H1WT06   A0A0L7LT08   A0A2A4K0M9   A0A2W1BPW3   A0A2A4JP60   A0A2A4J0P1   A0A3S2N3S1   A0A2A4JPZ6   A0A2H1X0E0   A0A0L7LEM3   A0A0L7KPM5   A0A0L7K245   A0A2W1C1G2   H9JND1   A0A0L7KXD0   A0A2H1W7N3   A0A2W1B638   A0A0L7KIU7   A0A0L7L7Q1   A0A2A4JRK8   A0A0L7KDU3   A0A2A4JNA4   A0A0L7L318   A0A0L7KW56   A0A0L7LRK8   A0A0L7K490   A0A2W1AYL0   A0A2A4JAE4   A0A2A4JF70   A0A2H1W136   A0A2W1BHY6   A0A2H1VLT4   A0A0L7K1Y0   A0A437BDH8   A0A0L7KWV6   A0A0L7KMJ9   A0A0L7KZD4   A0A2A4JKL5   A0A2A4IZX0   A0A437B2M3   A0A1S3DR71   A0A3Q0J8Z8   S4PY07   A0A3Q0IRU1   R7T3K5   R7TZD7   A0A1B6MF41   A0A0L7LN09   R7V3F8   R7UQ06   R7VDX2   R7VIK4  

KEGG

105842510    no KO assigned | (RefSeq) PHD finger protein rhinoceros-like

GO

GO:0016021   GO:0007165  

PANTHER

PTHR11505  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000790000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04278

outside

1  -  247

 

 

Pi

344.081003

Theta

170.255843

Tajima's D

3.61522

CLR

21.345083

CSRT

0.996250187490625

Interpretation

Uncertain