SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09268
Pre Gene Modal
BGIBMGA003322
Annotation
PREDICTED:_uncharacterized_protein_LOC106139316_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 1.795
 

Sequence

CDS
ATGAAGATTTTCGTTGTTCTCACCGCAATTCTGGCTTGTGCCAGTACACAAACTTTTGATGAACAGACGGAGATAAACGCACGTCAAGAGCGCTTGGTCACTAACCAGGTTGCTTCCGCCATCGAAAATATCAGAAAGCAAATAAGAGAAGCCGGATTCGATCCACTGGACGTTGATAGAAGAGAAATTGTCATCCCTCCAGAGGAAGACTTCCATGCACTTGCCGCTTTCGCCGAGGACATCAAAAGCACTGGATTAAGCAACATCGTCATTATCACTAACAATTTTAGCATCCTTAGCGCCCGTCTCAACTTAGTCCTGAGTCTACCTCGTGTTGAAGCTAGCGTCGGTGCTGCCCGTGTTGAGCTTAATGTGTTCGATTACGAAGGCTACGCTAGCGCCAGTGGACGTGCCGCCATAAACAACCTTCGTGTTAGTGCTGAAGTGCGTATAAGCATCAGCGTCGTCTCCGGAATTTCTATTAGGAGTCTCAATATAGACCTTACCTTAGGAGGAGTTGAGGCGGATCTAAATGTTAATTTGTTTGGACGCGACCTCTCCGACACCATCACTAACTTCCTCTCACAGACCGTGCCAACCACTATTGCCAATAACAGGACCACAATCAACAGGTTTTTGGAATATACCCTGCTTCAAATAATCGAAGATTTTCTTCCCTAA
Protein
MKIFVVLTAILACASTQTFDEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHALAAFAEDIKSTGLSNIVIITNNFSILSARLNLVLSLPRVEASVGAARVELNVFDYEGYASASGRAAINNLRVSAEVRISISVVSGISIRSLNIDLTLGGVEADLNVNLFGRDLSDTITNFLSQTVPTTIANNRTTINRFLEYTLLQIIEDFLP

Summary

Similarity
Belongs to the type-B carboxylesterase/lipase family.
Pfam
PF06585   JHBP        + More
PF00135   COesterase
Interpro
IPR010562   Haemolymph_juvenile_hormone-bd        + More
IPR038606   To_sf       
IPR019819   Carboxylesterase_B_CS       
IPR000997   Cholinesterase       
IPR019826   Carboxylesterase_B_AS       
IPR002018   CarbesteraseB       
IPR029058   AB_hydrolase       
SUPFAM
SSF53474   SSF53474       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.992663
 
 
Length:
226
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0698499999999998
Exp number, first 60 AAs:
0.0223
Total prob of N-in:
0.03795
outside
1  -  226
 
 

Population Genetic Test Statistics

Pi
168.715945
Theta
180.173512
Tajima's D
-0.685385
CLR
1.176998
CSRT
0.20173991300435
Interpretation
Possibly Positive selection
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