SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09265
Pre Gene Modal
BGIBMGA003326
Annotation
PREDICTED:_uncharacterized_protein_LOC106114764_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 1.885
 

Sequence

CDS
ATGAAGGCCTTCGCATTTGTTCTTGTTACTCTCGCTGCCAGCGTCGTTGCTGTGCCCTCAAAAGTTGACCTTGACAGAGAAAGCCAGAATTTGATCGAAAAACTGATCGTGAACACCATCAACCGCATCACTTCTGGTATCCAAGAACGTGGACTTGACCCAATCTACGTCGAAAAAGCCGAAGGCGATTACACTTTCCCAATTTCTGACATCTTCAGCGCATCTGGCACAGTAGCCGAATTGGCTCTCGAGGGCATCAGCAACGTTGTCGTCAATGACGTCACTTTCAACCTTTTGAGACCAACTACATTCAGCATCGACCTTGCCCTCCCCAAACTCAGCGCCTCTGCTGTCGCCGTCAACGGTCAGGCCACCATCTTTGGCAGGGAATTGGCTGTAGCCAGTAGTGGAAGCCTTGTCGTCGAAGATATTCGTCTGGTCTCCACTGTCAGCTTACGATTGCTACCTAGCATCAACGTTAGGGAGCTCAGTGCCGTTCTTACTGTTGGCAATGTTGAGTCCGCTCTCAAAGTTGTTCTCTTCGGCAACGACGTATCCGAAAAGCTGAATGACGCTTTGAACAACAGACTTCCCGAACTCCTCGAAACTTACAACGAGCAGATCAGGGAGATCGTTGAGCGTATTATCCTCTTCATCATCAACAATATTTTGTAA
Protein
MKAFAFVLVTLAASVVAVPSKVDLDRESQNLIEKLIVNTINRITSGIQERGLDPIYVEKAEGDYTFPISDIFSASGTVAELALEGISNVVVNDVTFNLLRPTTFSIDLALPKLSASAVAVNGQATIFGRELAVASSGSLVVEDIRLVSTVSLRLLPSINVRELSAVLTVGNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVERIILFIINNIL

Summary

Similarity
Belongs to the type-B carboxylesterase/lipase family.
Pfam
PF06585   JHBP        + More
PF00135   COesterase
Interpro
IPR010562   Haemolymph_juvenile_hormone-bd        + More
IPR038606   To_sf       
IPR019819   Carboxylesterase_B_CS       
IPR000997   Cholinesterase       
IPR019826   Carboxylesterase_B_AS       
IPR002018   CarbesteraseB       
IPR029058   AB_hydrolase       
IPR017943   Bactericidal_perm-incr_a/b_dom       
SUPFAM
SSF53474   SSF53474        + More
SSF55394   SSF55394       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.996802
 
 
Length:
224
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.512239999999999
Exp number, first 60 AAs:
0.49817
Total prob of N-in:
0.04756
outside
1  -  224
 
 

Population Genetic Test Statistics

Pi
202.088104
Theta
205.414826
Tajima's D
-0.193974
CLR
35.412987
CSRT
0.311234438278086
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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