Gene

KWMTBOMO09254

Annotation

PREDICTED:_mucin-2-like_[Amyelois_transitella]

Location

Bomo_Chr15(+):14289167-14292319      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.977

CDS

ATGTCGACGTCGGGCTACCTAGTTAATGTGCCGAAACTCAAAGGTTGCGAAAATTACGATGATTGGGCGTTCGCAACAAGTAATTTTTTGCTGCTCGAAGGCATTGACTTGGAGAACCTTTCCGCAGAAATGAGTGAAGCTGAGATGAAAAAAGCCAAAGCCAAACTCGTCATGACTATTGACTCTTCATTATACGCGCATATCAAGAGTGAGACTACAGTAATCGGTGTATGGAATAAATTGAAACAATTGTTCGATGACACCGGGTATCAACGAAAAATCAGTTTGCTTCGAACGTTAATTTCAGTTCGCCTCGAAAACTGTGATTCGATGACAAGCTACGTATCTCAAATAGTTGAAACTGCGCAGAAATTGAAGGGCACAGGATTCGAAATCACAGATGAGTGGATTGGGTCATTACTTTTGGCGGGACTCTCAGATAAGTTTTCACCTATGATAATGGCGATCGAGCATTCAGGAATCGCCATTAGCGCTGACGTCATTAAGACAAAATTGCTCGATATGTGTGAGGAGGTGGGTACTACTGAAAAAGATTCTGCATTTTGGTCAAAACAACAGCGGTGGAAAAGTGGAAACACTAACCGTGGTGTGAAATCGCAAACGTCAACGTCAAATAGTGACAGAAATGACAGTGCAAGTTCAAATGGCGGTAAACAAATAAAATGTTATAATTGCAAGAAAATAGGGCATTTTAAAAATAAATGTCCCGAACTAAAAACAAAGAAAACCTTAAATGCTTTTAGTGCTGCATTTTTTAACGGAAATTTTAGTACAAAAGACTGGTACGTCGATTCAGGTGCAAGTGCACACATGACGGCAAGTCGAGATTGTTTACAGTTAAATAGACCCGTGCATGAAAACAAAGAAATAGTAGTTGCAAATCAAATGACTGTGCCTGTTGTGAGTGTTGGTGAAACACAGATAACCACGATTGTAAATGGTTCTCAGTATGATGTCATTGTAAAGAATGTTTTATACATACCGAAGCTCACGACAAACTTATTATCGGTAAGTCAACTGATAGCAAATGGCAACAAAGTGTCATTTAAGAAGGATGTTTGTTTAATATATAATCCAGTAAATGAGCTTATAGGAATTGCAAACTTAACTAATGGTGTGTACAAACTACAAATACAAAGACCAGAGAGTGCATTATTGGCCATGACAATGTGGCATAGAAGACTAGGACATGTAAACAGTAAATCTTTAGAAATGATGAAAGAAGGTGCTGTGAAAGGGGTTACTTTTGATAAGAAAGCTGATATTCAGATCAAGAACTGTGAAGTGTGCTGTGAGGGCAAACAGGCTCGTTTCCCTTTCCCATCTGCTAATCATAGAAGTGATATACTACTAGAAGTAATACACTCAGATTTATGTGGGCCGATGGAGACCAAATCAATTGGTCAAGCAAAGTACTTTCTTCTGTTCATAGATGATGCCAGCAGAATGACTTATGTCTATTTCTTGAAGGAAAAGAACCAAGTATTCCAGCATTTCGATAACGGAGGTGAGTTTTGTTCACAAGAGATGGAACACTTCTTAAAACAAACTGGAATCATCCATCAGAAGACTAATCCTCACACTCCACAACAGAATGGACTCTCAGAAAGGTTCAACAGAACTGTAGTTGAACGGGCTAGATGTTTACTGTTTGAATCAGATCTCGACAAAAGTTTTTGGGGTGAAGCAGTAAATACTGCAGTATACCTAATGAATAGAATGCCAGCTGTCAGTCTAGGCATGATGACACCATATGAGAAGTGGACAGGCAAGAAGCCAGATTTGAGCTATGTCAGGATTTTTGGAAGTAAAGTAATGGTGCATGTTCCCAAAGTACAAAGACAAAAATGGGATAAGAAGGCTGACAAATTAATTCTAGTTGGTTATCCGGATAACGTGAAAGGTTACAGACTATATAACCCCAAAACCAGGAAGATTACTACGAGCAGGGACGTCATTATAATAGAGAAAGAACACTCGGACACAGCTCAGGTAGTAGTAAATAATGAAAAAGTGTTGGAGAAAGTTGAAAATTCAGAGAAAGAGAGAAGCATATCAGAAAATTCAACTATAGACGCTAACGATCCTACATATATTTATGACTCATCAAGCTCCCACGAAGATTCATATCAATCGGTGTATGAAAGTGAAAATGAGTCAACCTTAGATTCCATTTTAGAAGAAAATATTCAAAACTTACAGGAGCTTGGTAAGCGCAAGAGAAAGCCAGTAGAAAGATATGGCTATTCCAATCTCTGCATTGTAGATGAGCTGAAATCCTGTGTGATTCGAAAATTGAATTTGAGGCAGCGTTTATTTATTGCTAAAGACAGGGCACTTTTTAATGGTATATTTGCTTTGTTCATACTGATTCATAAAATGAATTTGAGACAGCGTTTATTTATTGCTAGAGACAGAGCAATGTGA

Protein

MSTSGYLVNVPKLKGCENYDDWAFATSNFLLLEGIDLENLSAEMSEAEMKKAKAKLVMTIDSSLYAHIKSETTVIGVWNKLKQLFDDTGYQRKISLLRTLISVRLENCDSMTSYVSQIVETAQKLKGTGFEITDEWIGSLLLAGLSDKFSPMIMAIEHSGIAISADVIKTKLLDMCEEVGTTEKDSAFWSKQQRWKSGNTNRGVKSQTSTSNSDRNDSASSNGGKQIKCYNCKKIGHFKNKCPELKTKKTLNAFSAAFFNGNFSTKDWYVDSGASAHMTASRDCLQLNRPVHENKEIVVANQMTVPVVSVGETQITTIVNGSQYDVIVKNVLYIPKLTTNLLSVSQLIANGNKVSFKKDVCLIYNPVNELIGIANLTNGVYKLQIQRPESALLAMTMWHRRLGHVNSKSLEMMKEGAVKGVTFDKKADIQIKNCEVCCEGKQARFPFPSANHRSDILLEVIHSDLCGPMETKSIGQAKYFLLFIDDASRMTYVYFLKEKNQVFQHFDNGGEFCSQEMEHFLKQTGIIHQKTNPHTPQQNGLSERFNRTVVERARCLLFESDLDKSFWGEAVNTAVYLMNRMPAVSLGMMTPYEKWTGKKPDLSYVRIFGSKVMVHVPKVQRQKWDKKADKLILVGYPDNVKGYRLYNPKTRKITTSRDVIIIEKEHSDTAQVVVNNEKVLEKVENSEKERSISENSTIDANDPTYIYDSSSSHEDSYQSVYESENESTLDSILEENIQNLQELGKRKRKPVERYGYSNLCIVDELKSCVIRKLNLRQRLFIAKDRALFNGIFALFILIHKMNLRQRLFIARDRAM

Uniprot

A0A212F7V4   A0A1Y1N668   A0A1Y1N932   A0A1Y1N6L8   V5GAG2   A0A194RJV9   + More
A0A0J7NHJ8   A0A2A4J959   A0A2A4JRI1   A0A182GZK6   A0A1W7R657   A0A1W7R6H6   A0A1Y1LWI3   A0A0A9Z683   W4VRQ4   A0A194RU38   A0A224XA26   A0A1W7R670   A0A1W7R663   A0A0A9XVJ9   A0A0A9WPH5   A0A0A9XEY5   A0A0A9WRE3   W4VRP9   A0A1W7R6K6   W4VRP2   A0A1W7R6J6   A0A0A1WXQ3   A0A085MVP5   A0A0J7K0M9   A0A1B6E9D0   A0A085N572   A0A034VP70   A0A0A9WQD4   A0A0V1FKH2   A0A0V1F2E6   A0A0V1K1Y9   A0A0V1APS7   A0A0N1ICY1   A0A0V0T3I0   A0A0V0TUP0   A0A146LFV8   A0A0A9YFM0   A0A2J7Q1Z2   A0A2J7RKJ6   A0A2J7R8S8   A0A2J7R668   A0A1Y3E9R1   A0A0V0WR33   A0A0V0WQU6   A0A0J7KG03   A0A0V0RWJ3   W8ANX7   A0A0N1IFR1   W8BFA2   A0A224X581   W8AUM1   W8B528   A0A0V1MGJ0   A0A0K8U6S2   W8APZ4   A0A0K8U956   A0A1Y1N3X2   A0A0A1XLZ7   W8B900   W8AEF0   A0A438F3A5   A0A151TGQ2   A0A0V0RDY1   A0A0V0V098   W8AL23   A0A0N5DIT8   A0A251TCA0   A0A182GA29   A0A438JWX0   A0A251TN47   W8ADM5   A0A151THM1   A0A0J7KDP1   A0A0J7KC47   A0A085N9K0   A0A0V1NJN8   A0A2A4IIH8   A5BPR9   A0A085MV21   A0A438FT52   A0A0K8UDK8  

Pubmed

22118469    28004739    26354079    26483478    25401762    25830018    + More
24929829    25348373    26823975    24495485    30458008    22057054    28538728   

EMBL

AGBW02009826    OWR49812.1    GEZM01011856    JAV93393.1    GEZM01011857    JAV93390.1    + More
GEZM01011858    GEZM01011854    JAV93389.1    GALX01001351    JAB67115.1    KQ460297    KPJ16236.1    LBMM01004924    KMQ91985.1    NWSH01002292    PCG68657.1    PCG68658.1    NWSH01000816    PCG74073.1    JXUM01099713    KQ564513    KXJ72145.1    GEHC01000991    JAV46654.1    GEHC01000990    JAV46655.1    GEZM01045162    JAV77889.1    GBHO01003630    JAG39974.1    GANO01000510    JAB59361.1    KQ459875    KPJ19636.1    GFTR01008662    JAW07764.1    GEHC01000989    JAV46656.1    GEHC01000988    JAV46657.1    GBHO01020706    JAG22898.1    GBHO01033237    JAG10367.1    GBHO01026221    JAG17383.1    GBHO01033235    JAG10369.1    GANO01000659    JAB59212.1    GEHC01000867    JAV46778.1    GANO01000660    JAB59211.1    GEHC01000868    JAV46777.1    GBXI01011094    JAD03198.1    KL367628    KFD61291.1    LBMM01017716    KMQ83988.1    GEDC01002834    JAS34464.1    KL367553    KFD64618.1    GAKP01015352    JAC43600.1    GBHO01036544    JAG07060.1    JYDT01000069    KRY86576.1    JYDR01000001    KRY80095.1    JYDS01000009    JYDV01000021    KRZ33483.1    KRZ41218.1    JYDH01000330    KRY26802.1    KQ460882    KPJ11482.1    JYDJ01000808    KRX33413.1    JYDJ01000136    KRX42725.1    GDHC01012180    JAQ06449.1    GBHO01011746    GBHO01011744    GBHO01011742    JAG31858.1    JAG31860.1    JAG31862.1    NEVH01019375    PNF22597.1    NEVH01002725    PNF41351.1    NEVH01006721    PNF37230.1    NEVH01006980    PNF36330.1    LVZM01023578    OUC39908.1    JYDK01000071    KRX78146.1    KRX78123.1    LBMM01008124    KMQ89126.1    JYDL01000068    KRX18751.1    GAMC01020352    JAB86203.1    KQ460208    KPJ16606.1    GAMC01018156    JAB88399.1    GFTR01008771    JAW07655.1    GAMC01018157    JAB88398.1    GAMC01018154    JAB88401.1    JYDO01000104    KRZ71003.1    GDHF01030254    JAI22060.1    GAMC01019997    JAB86558.1    GDHF01029191    JAI23123.1    GEZM01013472    GEZM01013471    GEZM01013470    JAV92539.1    GBXI01002679    JAD11613.1    GAMC01011443    JAB95112.1    GAMC01019995    JAB86560.1    QGNW01001128    RVW54433.1    CM003608    KYP66219.1    JYDL01000297    KRX12674.1    JYDN01000113    KRX56900.1    GAMC01019998    JAB86557.1    CM007900    OTG08534.1    JXUM01155348    KQ572178    KXJ68066.1    QGNW01000024    RVX13462.1    CM007899    OTG12557.1    GAMC01020355    JAB86200.1    KYP66486.1    LBMM01008884    KMQ88558.1    LBMM01009686    KMQ87943.1    KL367527    KFD66146.1    JYDM01000185    KRZ84108.1    NWVJ01000098    PCG17690.1    AM466849    CAN77122.1    KL367637    KFD61067.1    QGNW01000748    RVW63137.1    GDHF01027648    JAI24666.1   

Proteomes

UP000007151    UP000053240    UP000036403    UP000218220    UP000069940    UP000249989    + More
UP000054995    UP000054632    UP000054805    UP000054826    UP000054776    UP000055048    UP000235965    UP000243006    UP000054673    UP000054630    UP000054843    UP000288805    UP000075243    UP000054681    UP000046395    UP000215914    UP000054924   

Pfam

PF13976   gag_pre-integrs        + More
PF00098   zf-CCHC
PF00665   rve
PF07727   RVT_2
PF13961   DUF4219
PF14244   Retrotran_gag_3
PF05380   Peptidase_A17
PF00078   RVT_1
PF05585   DUF1758

Interpro

IPR025724   GAG-pre-integrase_dom        + More
IPR036397   RNaseH_sf       
IPR001584   Integrase_cat-core       
IPR039537   Retrotran_Ty1/copia-like       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR013103   RVT_2       
IPR025314   DUF4219       
IPR029472   Copia-like_N       
IPR008042   Retrotrans_Pao       
IPR000477   RT_dom       
IPR008737   Peptidase_asp_put       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       

Gene 3D

3.30.420.10    

ProteinModelPortal

A0A212F7V4   A0A1Y1N668   A0A1Y1N932   A0A1Y1N6L8   V5GAG2   A0A194RJV9   + More
A0A0J7NHJ8   A0A2A4J959   A0A2A4JRI1   A0A182GZK6   A0A1W7R657   A0A1W7R6H6   A0A1Y1LWI3   A0A0A9Z683   W4VRQ4   A0A194RU38   A0A224XA26   A0A1W7R670   A0A1W7R663   A0A0A9XVJ9   A0A0A9WPH5   A0A0A9XEY5   A0A0A9WRE3   W4VRP9   A0A1W7R6K6   W4VRP2   A0A1W7R6J6   A0A0A1WXQ3   A0A085MVP5   A0A0J7K0M9   A0A1B6E9D0   A0A085N572   A0A034VP70   A0A0A9WQD4   A0A0V1FKH2   A0A0V1F2E6   A0A0V1K1Y9   A0A0V1APS7   A0A0N1ICY1   A0A0V0T3I0   A0A0V0TUP0   A0A146LFV8   A0A0A9YFM0   A0A2J7Q1Z2   A0A2J7RKJ6   A0A2J7R8S8   A0A2J7R668   A0A1Y3E9R1   A0A0V0WR33   A0A0V0WQU6   A0A0J7KG03   A0A0V0RWJ3   W8ANX7   A0A0N1IFR1   W8BFA2   A0A224X581   W8AUM1   W8B528   A0A0V1MGJ0   A0A0K8U6S2   W8APZ4   A0A0K8U956   A0A1Y1N3X2   A0A0A1XLZ7   W8B900   W8AEF0   A0A438F3A5   A0A151TGQ2   A0A0V0RDY1   A0A0V0V098   W8AL23   A0A0N5DIT8   A0A251TCA0   A0A182GA29   A0A438JWX0   A0A251TN47   W8ADM5   A0A151THM1   A0A0J7KDP1   A0A0J7KC47   A0A085N9K0   A0A0V1NJN8   A0A2A4IIH8   A5BPR9   A0A085MV21   A0A438FT52   A0A0K8UDK8  

PDB

1C6V     E-value=0.0067259,     Score=96

KEGG

NA   

GO

GO:0015074   GO:0000943   GO:0003676   GO:0008270   GO:0000413   GO:0003723   GO:0003677   GO:0016020   GO:0016876   GO:0043039  

PANTHER

PTHR11439  

Length:

815

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

15.46162

Exp number, first 60 AAs:

0.00053

Total prob of N-in:

0.00030

outside

1  -  785

TMhelix

786  -  803

inside

804  -  815

 

 

Pi

222.552096

Theta

152.327638

Tajima's D

1.357926

CLR

0.336611

CSRT

0.751312434378281

Interpretation

Uncertain