Silkworm Genome Informatics Database

Gene

KWMTBOMO09253

Annotation

PREDICTED:_uncharacterized_protein_LOC106114575_[Papilio_xuthus]

Location

Bomo_Chr15(-):14283764-14285826 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.258

CDS

ATGGGAACACCAGACGACTTCGAACAGCTGCCGGGGGCACAGCCTCTCCAAGCAGGGTTGATATTACTGAAGCCGTCAAGAGGTGATCTGATATCACCAGCAAAACTTCCCTACAAAGATGACACGAACTTAGTATATGGAAATACAGACAACCTTGGCATAACATATGGCAAGACCAAAGATCGGTTACTTCATGCGAACTTCCGGAAGGCCGATCTATTAGTAAGTAAAATTCCTTTTAAGTAA

Protein

MGTPDDFEQLPGAQPLQAGLILLKPSRGDLISPAKLPYKDDTNLVYGNTDNLGITYGKTKDRLLHANFRKADLLVSKIPFK

Similarity

Belongs to the CRISP family.

Uniprot

A0A212EM41 A0A437BNS8 A0A2A4JRE6 H9J1E2 A0A194RJR2 A0A194PKP8 + More
A0A2H1VXN2 A0A2H1V8B3 A0A3S2NIQ0

Pubmed

22118469 19121390 26354079

EMBL

AGBW02013924 OWR42555.1 RSAL01000026 RVE52043.1 NWSH01000826 PCG73990.1 + More
BABH01023876 KQ460106 KPJ17792.1 KQ459602 KPI93578.1 ODYU01005079 SOQ45607.1 ODYU01001176 SOQ37036.1 RVE52042.1

Proteomes

UP000007151 UP000283053 UP000218220 UP000005204 UP000053240 UP000053268 + More

PRIDE

H9J1E2

Pfam

PF01156 IU_nuc_hydro + More
PF00188 CAP

Interpro

IPR001910   Inosine/uridine_hydrolase_dom        + More
IPR036452   Ribo_hydro-like
IPR034113   SCP_GAPR1-like
IPR001283   CRISP-related
IPR035940   CAP_sf
IPR018244   Allrgn_V5/Tpx1_CS
IPR014044   CAP_domain

SUPFAM

SSF53590 SSF53590 + More
SSF55797 SSF55797

Gene 3D

3.90.245.10 3.40.33.10

CDD

cd05382 SCP_GAPR-1_like

ProteinModelPortal

A0A212EM41 A0A437BNS8 A0A2A4JRE6 H9J1E2 A0A194RJR2 A0A194PKP8 + More
A0A2H1VXN2 A0A2H1V8B3 A0A3S2NIQ0

KEGG

NA

GO

GO:0005576

Length:

81

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000690000000000001

Exp number, first 60 AAs:

0.000690000000000001

Total prob of N-in:

0.10263

outside

1 - 81

Pi

178.073223

Theta

138.218286

Tajima's D

1.504149

CLR

0

CSRT

0.788060596970152

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics