Gene

KWMTBOMO09249

Annotation

PREDICTED:_uncharacterized_protein_C1683.06c-like_[Bombyx_mori]

Location

Bomo_Chr15(-):14215275-14224756      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.725 Extracellular   Reliability : 1.311

CDS

ATGACAGGAATTAAGAGGAAATTCGTGATCGACAATGACGCTGGCGGTGATGATGCTATGGCCATATTCTTGGCCGCTCTGTTCGAGAAGTATCATGCCGGTCCTCAATTAATTGGAGTTACGACAAGCAACGGTAACACCAACGAAGACAACGTTTCTTACAATAACCAGAGAATACTGAAGGTCGCCAAAAGACAGGACGTGCCAATTTATAGAGGTTCGAAATCCTCTTTGGTGAAAACCCCTGAAATCACGGACTACTTCGGTAAAGACGGCCTCGGAGACAGTGGGGATGTCTACCCAGATCTGGTACCGCCGCATACAGAAAATGCCGTCAACGCTCTTATACAATTGTCTAAGACACATGAAGGCAACCTTACCATCATCACTATAGGCGCGCTAACCAACTTAGCTTTGGCCATTAAAACGGACCCCGCCTTTCTCGGCAGACTCGCACACGTCTACATCGGAGCCGGACACATACATACCGAAGAATACCCGACAGCAGAGTTCAACGCTCACATGGATGTTGAAGCGTACCACGTCGTGACCGAAAACGCGAATCCAGAGAAAGTTACAATATTCCCCTTCTCACAGGTGCAGAAATATTGTAACTTTAGCCGGGAGTGGAGGATAAACGTTCTCGGCCGGATTTAG

Protein

MTGIKRKFVIDNDAGGDDAMAIFLAALFEKYHAGPQLIGVTTSNGNTNEDNVSYNNQRILKVAKRQDVPIYRGSKSSLVKTPEITDYFGKDGLGDSGDVYPDLVPPHTENAVNALIQLSKTHEGNLTIITIGALTNLALAIKTDPAFLGRLAHVYIGAGHIHTEEYPTAEFNAHMDVEAYHVVTENANPEKVTIFPFSQVQKYCNFSREWRINVLGRI

Similarity

Belongs to the CRISP family.

Uniprot

A0A2A4JSV1   A0A2H1V6B1   A0A212F363   S4PTH5   I4DKU7   A0A437BNT0   + More
A0A194PKP8   A0A3S2PI34   A0A194RJR2   H9J1E4   H9J1E5   A0A212EM36   A0A437BNR6   H9J1E3   A0A2H1V6D2   A0A2H1V7M9   A0A2H1VEH3   A0A2A4JUL8   A0A0L7KWL6   A0A2J7QJF6   A0A2J7PGB2   A0A232EVA2   A0A2J7PGB4   A0A067R7I0   A0A182M9Y1   A0A1W4ZYG1   A0A182R4F1   A0A182QPL3   K7J4C8   A0A182YL46   A0A3B1JLF6   A0A0P4Z7T0   A0A182N906   A0A0P4YRB0   A0A0N8C0V8   A0A162R495   A0A182WED0   A0A0P5H8B6   E9HSD0   A0A2D0RVU6   K7J9V9   A0A182V527   A0A0N8A1D7   A0A0N7ZIB0   V9KSU3   A0A232EPX4   A0A2B4RPW5   A0A182TTK6   A0A3B4EK92   K7J9W1   A0A3B3HYZ7   A0A3P9KZ16   K7J4B7   A0A3P9JCS3   A0A1S4H8C1   A0A182L4K9   A0A182HH40   A0A3B3RFI1   Q7PZ48   C3XV52   A0A232EJH0   A0A1I8JA73   A0A1I8J8V7   V4A517   A0A0P6HC41   A0A3P9KYP5   A0A182X6N5   E1ZUY1   A0A3P9MBH2   A0A3M6TBA3   W4Z6M6   A0A182P6Y1   A0A0M8ZQI7   A0A3Q0S0V8   A0A0A9W0Q8   A0A3P9CLW3   A0A2U9AVS9   A0A232F8K5   A0A151JU46   A0A0P7U892   A0A3Q1H5H0   A0A3L7ACX1   A0A3Q2YSP6   A0A3B4HBK2   A0A3P9CLT6   A0A232EHL1   A0A3B4XIJ0   A0A2J7PGB5   A0A0L7RA08   A0A401P6R6   A0A401SBJ2   A0A3P8ND07   A0A2U9C6R0   A0A0P6CRB8   W5MPL0   F4WHN9   A0A3Q2VR14   A0A3B4HDL0   A7S2K9   A0A1D1V4P4  

Pubmed

22118469    23622113    22651552    26354079    19121390    26227816    + More
28648823    24845553    20075255    25244985    25329095    21292972    24402279    17554307    12364791    20966253    29240929    18563158    26392545    23254933    20798317    30382153    25401762    26823975    25186727    30297745    21719571    17615350    27649274   

EMBL

NWSH01000641    PCG75091.1    ODYU01000912    SOQ36390.1    AGBW02010611    OWR48179.1    + More
GAIX01012028    JAA80532.1    AK401915    BAM18537.1    RSAL01000026    RVE52039.1    KQ459602    KPI93578.1    RVE52040.1    KQ460106    KPJ17792.1    BABH01023867    BABH01023868    BABH01023869    AGBW02013924    OWR42554.1    RVE52041.1    ODYU01000913    SOQ36391.1    SOQ36392.1    ODYU01002133    SOQ39238.1    PCG75092.1    JTDY01004982    KOB67515.1    NEVH01013556    PNF28723.1    NEVH01025635    PNF15370.1    NNAY01002030    OXU22265.1    PNF15371.1    KK852824    KDR15455.1    AXCM01000780    AXCN02001403    AAZX01007303    GDIP01216639    JAJ06763.1    GDIP01224935    JAI98466.1    GDIQ01125795    JAL25931.1    LRGB01000243    KZS20217.1    GDIQ01229952    JAK21773.1    GL732749    EFX65347.1    AAZX01002793    AAZX01017422    GDIP01192041    JAJ31361.1    GDIP01242657    JAI80744.1    JW868927    AFP01445.1    NNAY01002872    OXU20403.1    LSMT01000316    PFX20464.1    AAZX01013758    AAZX01006389    AAAB01008986    APCN01002384    EAA00053.3    GG666468    EEN67978.1    NNAY01004007    OXU18506.1    NIVC01000958    PAA74291.1    NIVC01000712    PAA78034.1    KB201205    ESO98993.1    GDIQ01021770    JAN72967.1    GL434335    EFN74979.1    RCHS01003977    RMX38619.1    AAGJ04152716    KQ435903    KOX69065.1    GBHO01043586    GBHO01043585    GBRD01016007    GBRD01008012    GBRD01008011    GBRD01008009    GDHC01015347    JAG00018.1    JAG00019.1    JAG49819.1    JAQ03282.1    CP026243    AWO95710.1    NNAY01000718    OXU26820.1    KQ981842    KYN35001.1    JARO02007536    KPP63836.1    RCUX01000002    RLP77578.1    NNAY01004499    OXU17811.1    PNF15373.1    KQ414619    KOC67707.1    BFAA01003142    GCB68831.1    BEZZ01000176    GCC27766.1    CP026254    AWP11416.1    GDIQ01088659    JAN06078.1    AHAT01003407    GL888167    EGI66246.1    DS469569    EDO42061.1    BDGG01000003    GAU95890.1   

Proteomes

UP000218220    UP000007151    UP000283053    UP000053268    UP000053240    UP000005204    + More
UP000037510    UP000235965    UP000215335    UP000027135    UP000075883    UP000192224    UP000075900    UP000075886    UP000002358    UP000076408    UP000018467    UP000075884    UP000076858    UP000075920    UP000000305    UP000221080    UP000075903    UP000225706    UP000075902    UP000261440    UP000001038    UP000265180    UP000265200    UP000075882    UP000075840    UP000261540    UP000007062    UP000001554    UP000095280    UP000215902    UP000030746    UP000076407    UP000000311    UP000275408    UP000007110    UP000075885    UP000053105    UP000261340    UP000265160    UP000246464    UP000078541    UP000034805    UP000265040    UP000272503    UP000264820    UP000261460    UP000261360    UP000053825    UP000288216    UP000287033    UP000265100    UP000018468    UP000007755    UP000264840    UP000001593    UP000186922   

PRIDE

H9J1E4    H9J1E5    H9J1E3   

Pfam

PF01156   IU_nuc_hydro        + More
PF00188   CAP
PF06733   DEAD_2
PF13307   Helicase_C_2
PF04280   Tim44

Interpro

IPR036452   Ribo_hydro-like        + More
IPR001910   Inosine/uridine_hydrolase_dom       
IPR034113   SCP_GAPR1-like       
IPR001283   CRISP-related       
IPR035940   CAP_sf       
IPR018244   Allrgn_V5/Tpx1_CS       
IPR014044   CAP_domain       
IPR006554   Helicase-like_DEXD_c2       
IPR027417   P-loop_NTPase       
IPR014013   Helic_SF1/SF2_ATP-bd_DinG/Rad3       
IPR028331   CHL1/DDX11       
IPR010614   DEAD_2       
IPR013020   Rad3/Chl1-like       
IPR006555   ATP-dep_Helicase_C       
IPR007379   Tim44-like_dom       
IPR032710   NTF2-like_dom_sf       
IPR039544   Tim44-like       
IPR015910   I/U_nuclsd_hydro_CS       

SUPFAM

SSF53590   SSF53590        + More
SSF55797   SSF55797       
SSF52540   SSF52540       
SSF54427   SSF54427       

Gene 3D

3.90.245.10     3.40.33.10    

CDD

cd05382  SCP_GAPR-1_like

ProteinModelPortal

A0A2A4JSV1   A0A2H1V6B1   A0A212F363   S4PTH5   I4DKU7   A0A437BNT0   + More
A0A194PKP8   A0A3S2PI34   A0A194RJR2   H9J1E4   H9J1E5   A0A212EM36   A0A437BNR6   H9J1E3   A0A2H1V6D2   A0A2H1V7M9   A0A2H1VEH3   A0A2A4JUL8   A0A0L7KWL6   A0A2J7QJF6   A0A2J7PGB2   A0A232EVA2   A0A2J7PGB4   A0A067R7I0   A0A182M9Y1   A0A1W4ZYG1   A0A182R4F1   A0A182QPL3   K7J4C8   A0A182YL46   A0A3B1JLF6   A0A0P4Z7T0   A0A182N906   A0A0P4YRB0   A0A0N8C0V8   A0A162R495   A0A182WED0   A0A0P5H8B6   E9HSD0   A0A2D0RVU6   K7J9V9   A0A182V527   A0A0N8A1D7   A0A0N7ZIB0   V9KSU3   A0A232EPX4   A0A2B4RPW5   A0A182TTK6   A0A3B4EK92   K7J9W1   A0A3B3HYZ7   A0A3P9KZ16   K7J4B7   A0A3P9JCS3   A0A1S4H8C1   A0A182L4K9   A0A182HH40   A0A3B3RFI1   Q7PZ48   C3XV52   A0A232EJH0   A0A1I8JA73   A0A1I8J8V7   V4A517   A0A0P6HC41   A0A3P9KYP5   A0A182X6N5   E1ZUY1   A0A3P9MBH2   A0A3M6TBA3   W4Z6M6   A0A182P6Y1   A0A0M8ZQI7   A0A3Q0S0V8   A0A0A9W0Q8   A0A3P9CLW3   A0A2U9AVS9   A0A232F8K5   A0A151JU46   A0A0P7U892   A0A3Q1H5H0   A0A3L7ACX1   A0A3Q2YSP6   A0A3B4HBK2   A0A3P9CLT6   A0A232EHL1   A0A3B4XIJ0   A0A2J7PGB5   A0A0L7RA08   A0A401P6R6   A0A401SBJ2   A0A3P8ND07   A0A2U9C6R0   A0A0P6CRB8   W5MPL0   F4WHN9   A0A3Q2VR14   A0A3B4HDL0   A7S2K9   A0A1D1V4P4  

PDB

3T8I     E-value=7.2015e-22,     Score=253

KEGG

101743385    no KO assigned | (RefSeq) uncharacterized protein C1683.06c-like

GO

GO:0016787   GO:0005576   GO:0016021   GO:0005634   GO:0006139   GO:0003677   GO:0004003   GO:0005524  

PANTHER

PTHR11472:SF41   PTHR10721  

Subcellular location

Nucleus  

Length:

218

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.64292

Exp number, first 60 AAs:

0.01147

Total prob of N-in:

0.16848

outside

1  -  218

 

 

Pi

303.281165

Theta

165.045749

Tajima's D

3.748218

CLR

0.256867

CSRT

0.99750012499375

Interpretation

Uncertain