Gene

KWMTBOMO09248

Pre Gene Modal

BGIBMGA003332

Annotation

PREDICTED:_uncharacterized_protein_C1683.06c-like_[Bombyx_mori]

Location

Bomo_Chr15(-):14201810-14206566      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.5 Mitochondrial   Reliability : 1.43

CDS

ATGATACCGATCTACCGTGGCTCTGCAGAGGCTTTGGTCAGTCCCTTTGGAAATGTCTGGTACTACGGCCTAGATGGATTAGGGGATAACAACGATAGTTATACGGATCTATTCCCGCCTGCGGAAGAAAGCGCTGCATTTGCTCTTATTGAAAATTCTAAGAAATACGAAGGATCCCTTTCCGTTGTAACCATTGGAACATTGACGAACATTGCCGTGGCAATGAAGTACGACCCGAAATTTTTGGACCGCCTTTCGCATTTGTATATAGGAGCGGGACATTTGTATAGCAAAGAAGACCCAAAACCCGAATTCAACGCCTTGATGGACGTAGAGGCCTATCATGTGGTGATGCAGAAGGCTGACCCAGAAAAAGTGACAATTTTACCATTTTCACAAGCAAGGCTCCATTGCAACTTCAGTGCGAGTTGGAGAAAAAATGTTTTGGGTGCTATTGACACTAAAATAATGAAAGCTCAGAATAAGCACGAAAGAATCTCCTTGACCAAGAACGTGAGATGGCAGTCACTGGACCCAGCGGTGATATCAACGTTCCTTAAACCGGATTTAGTCAAAGAATATAAATACGCCAAGAACGATATTATTATGTGCGGTAAAAACAGGGGTATCAACACAAACGAATTCGTACCGAAAGACGAAGCCAACGTTCGGGTGGTATATTCAATCGATATAAATCATTTAAGACAATGA

Protein

MIPIYRGSAEALVSPFGNVWYYGLDGLGDNNDSYTDLFPPAEESAAFALIENSKKYEGSLSVVTIGTLTNIAVAMKYDPKFLDRLSHLYIGAGHLYSKEDPKPEFNALMDVEAYHVVMQKADPEKVTILPFSQARLHCNFSASWRKNVLGAIDTKIMKAQNKHERISLTKNVRWQSLDPAVISTFLKPDLVKEYKYAKNDIIMCGKNRGINTNEFVPKDEANVRVVYSIDINHLRQ

Similarity

Belongs to the CRISP family.

Uniprot

H9J1E5   A0A2A4JSV1   S4PTH5   A0A212F363   A0A3S2PI34   I4DKU7   + More
A0A2H1V6B1   A0A437BNT0   A0A194PKP8   A0A194RJR2   A0A2H1V7M9   A0A437BNR6   A0A2H1VEH3   H9J1E3   H9J1E4   A0A2H1V6D2   A0A212EM36   A0A2A4JUL8   A0A0L7KWL6   A0A2J7PGB5   A0A2H8TE51   A0A2J7PGB2   A0A2J7PGB4   A0A0L7RA08   J9K8F8   A0A154PJN3   K7J9V9   A0A1S4H8C1   A0A182L4K9   A0A182HH40   Q7PZ48   A0A2S2NI66   A0A087ZSJ3   A0A182TTK6   A0A182X6N5   A0A232EJH0   A0A232EVA2   A0A182V527   A0A1I8N3R1   A0A0M8ZQI7   A0A1I8MZ05   K7IPA4   J9K1E6   A0A182JZQ1   A0A2A3E2X8   A0A1D2MCH6   A0A232F8D7   K7J4C8   A0A232FNC3   A0A3Q0IUX2   A0A232EHL1   A0A0A9YSD7   A0A3Q0IZE2   Q17J48   K7J9W0   A0A182N906   A0A182QPL3   K7IWB6   Q175Y5   A0A023EQ63   K7JBQ6   A0A182P6Y1   A0A182G521   A0A0M3QTT8   Q8T9V9   A0A232FJG7   K7J4B7   A0A182HBT0   A0A023ERL2   W5JQK0   R4G3N5   A0A0A1XD13   A0A232EPX4   A0A0K8VA83   A0A182G8A2   K7J9W1   Q5MIX5   A0A154NZH2   A0A151JU46   A0A182YL46   A0A310SS75   A0A026W765   W8BK31   A0A0C9RAJ3   A0A0M9A8E2   A0A2K8JLG6   A0A1B6K2M9   A0A034WBW2   A0A182R4F1   A0A1Q3FRU1   A0A0K8VTS9   R4WU43   A0A067R7I0   A0A182M9Y1   F4WHN9   C3XV52   B0WZ03   A0A0K8VNV2   A0A1L8DYF5  

Pubmed

19121390    23622113    22118469    22651552    26354079    26227816    + More
20075255    12364791    20966253    28648823    25315136    27289101    25401762    26823975    17510324    24945155    26483478    12213246    12459196    20920257    23761445    25830018    17244540    25244985    24508170    24495485    25348373    23691247    24845553    21719571    18563158   

EMBL

BABH01023867    NWSH01000641    PCG75091.1    GAIX01012028    JAA80532.1    AGBW02010611    + More
OWR48179.1    RSAL01000026    RVE52040.1    AK401915    BAM18537.1    ODYU01000912    SOQ36390.1    RVE52039.1    KQ459602    KPI93578.1    KQ460106    KPJ17792.1    ODYU01000913    SOQ36392.1    RVE52041.1    ODYU01002133    SOQ39238.1    BABH01023869    BABH01023868    SOQ36391.1    AGBW02013924    OWR42554.1    PCG75092.1    JTDY01004982    KOB67515.1    NEVH01025635    PNF15373.1    GFXV01000566    MBW12371.1    PNF15370.1    PNF15371.1    KQ414619    KOC67707.1    ABLF02034876    KQ434912    KZC11420.1    AAZX01002793    AAZX01017422    AAAB01008986    APCN01002384    EAA00053.3    GGMR01004199    MBY16818.1    NNAY01004007    OXU18506.1    NNAY01002030    OXU22265.1    KQ435903    KOX69065.1    ABLF02039477    KZ288446    PBC25616.1    LJIJ01001842    ODM90698.1    NNAY01000743    OXU26729.1    AAZX01007303    NNAY01000004    OXU32214.1    NNAY01004499    OXU17811.1    GBHO01011144    GBHO01011140    GBHO01011137    GBRD01012537    GBRD01012536    GBRD01000907    GBRD01000906    GBRD01000905    GDHC01017642    JAG32460.1    JAG32464.1    JAG32467.1    JAG53287.1    JAQ00987.1    CH477235    EAT46661.1    AXCN02001403    CH477393    EAT41911.1    EAT41912.1    EAT41913.1    GAPW01002403    JAC11195.1    AAZX01004663    AAZX01005711    AAZX01011636    JXUM01042847    KQ561341    KXJ78910.1    CP012523    ALC39459.1    AY038045    AF466587    AAK71686.1    AAL76010.1    NNAY01000110    OXU30884.1    AAZX01006389    JXUM01125673    KQ566972    KXJ69689.1    GAPW01002282    JAC11316.1    ADMH02000745    ETN65185.1    GAHY01001506    JAA76004.1    GBXI01005447    JAD08845.1    NNAY01002872    OXU20403.1    GDHF01016576    JAI35738.1    JXUM01151731    KQ571286    KXJ68210.1    AAZX01013758    AY826085    AAV90657.1    KQ434786    KZC05065.1    KQ981842    KYN35001.1    KQ760974    OAD58555.1    KK107390    EZA51461.1    GAMC01007483    JAB99072.1    GBYB01000894    GBYB01005290    GBYB01005291    JAG70661.1    JAG75057.1    JAG75058.1    KQ435727    KOX78033.1    MF683286    ATU82427.1    GECU01002018    JAT05689.1    GAKP01005881    JAC53071.1    GFDL01004843    JAV30202.1    GDHF01010344    GDHF01005959    JAI41970.1    JAI46355.1    AK418237    BAN21452.1    KK852824    KDR15455.1    AXCM01000780    GL888167    EGI66246.1    GG666468    EEN67978.1    DS232202    EDS37317.1    GDHF01011748    JAI40566.1    GFDF01002789    JAV11295.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053268    UP000053240    + More
UP000037510    UP000235965    UP000053825    UP000007819    UP000076502    UP000002358    UP000075882    UP000075840    UP000007062    UP000005203    UP000075902    UP000076407    UP000215335    UP000075903    UP000095301    UP000053105    UP000075881    UP000242457    UP000094527    UP000079169    UP000008820    UP000075884    UP000075886    UP000075885    UP000069940    UP000249989    UP000092553    UP000000673    UP000078541    UP000076408    UP000053097    UP000075900    UP000027135    UP000075883    UP000007755    UP000001554    UP000002320   

PRIDE

H9J1E5    H9J1E3    H9J1E4   

Pfam

PF01156   IU_nuc_hydro        + More
PF00188   CAP
PF04280   Tim44
PF06733   DEAD_2
PF13307   Helicase_C_2

Interpro

IPR036452   Ribo_hydro-like        + More
IPR001910   Inosine/uridine_hydrolase_dom       
IPR034113   SCP_GAPR1-like       
IPR001283   CRISP-related       
IPR035940   CAP_sf       
IPR018244   Allrgn_V5/Tpx1_CS       
IPR014044   CAP_domain       
IPR007379   Tim44-like_dom       
IPR032710   NTF2-like_dom_sf       
IPR039544   Tim44-like       
IPR006554   Helicase-like_DEXD_c2       
IPR027417   P-loop_NTPase       
IPR014013   Helic_SF1/SF2_ATP-bd_DinG/Rad3       
IPR028331   CHL1/DDX11       
IPR010614   DEAD_2       
IPR013020   Rad3/Chl1-like       
IPR006555   ATP-dep_Helicase_C       

SUPFAM

SSF53590   SSF53590        + More
SSF55797   SSF55797       
SSF54427   SSF54427       
SSF52540   SSF52540       

Gene 3D

3.90.245.10     3.40.33.10    

CDD

cd05382  SCP_GAPR-1_like

ProteinModelPortal

H9J1E5   A0A2A4JSV1   S4PTH5   A0A212F363   A0A3S2PI34   I4DKU7   + More
A0A2H1V6B1   A0A437BNT0   A0A194PKP8   A0A194RJR2   A0A2H1V7M9   A0A437BNR6   A0A2H1VEH3   H9J1E3   H9J1E4   A0A2H1V6D2   A0A212EM36   A0A2A4JUL8   A0A0L7KWL6   A0A2J7PGB5   A0A2H8TE51   A0A2J7PGB2   A0A2J7PGB4   A0A0L7RA08   J9K8F8   A0A154PJN3   K7J9V9   A0A1S4H8C1   A0A182L4K9   A0A182HH40   Q7PZ48   A0A2S2NI66   A0A087ZSJ3   A0A182TTK6   A0A182X6N5   A0A232EJH0   A0A232EVA2   A0A182V527   A0A1I8N3R1   A0A0M8ZQI7   A0A1I8MZ05   K7IPA4   J9K1E6   A0A182JZQ1   A0A2A3E2X8   A0A1D2MCH6   A0A232F8D7   K7J4C8   A0A232FNC3   A0A3Q0IUX2   A0A232EHL1   A0A0A9YSD7   A0A3Q0IZE2   Q17J48   K7J9W0   A0A182N906   A0A182QPL3   K7IWB6   Q175Y5   A0A023EQ63   K7JBQ6   A0A182P6Y1   A0A182G521   A0A0M3QTT8   Q8T9V9   A0A232FJG7   K7J4B7   A0A182HBT0   A0A023ERL2   W5JQK0   R4G3N5   A0A0A1XD13   A0A232EPX4   A0A0K8VA83   A0A182G8A2   K7J9W1   Q5MIX5   A0A154NZH2   A0A151JU46   A0A182YL46   A0A310SS75   A0A026W765   W8BK31   A0A0C9RAJ3   A0A0M9A8E2   A0A2K8JLG6   A0A1B6K2M9   A0A034WBW2   A0A182R4F1   A0A1Q3FRU1   A0A0K8VTS9   R4WU43   A0A067R7I0   A0A182M9Y1   F4WHN9   C3XV52   B0WZ03   A0A0K8VNV2   A0A1L8DYF5  

PDB

3T8I     E-value=8.11369e-09,     Score=141

KEGG

101746651    no KO assigned | (RefSeq) probable uridine nucleosidase 2

GO

GO:0016787   GO:0005576   GO:0016021   GO:0005634   GO:0006139   GO:0003677   GO:0004003   GO:0005524  

PANTHER

PTHR10721   PTHR11472:SF41  

Subcellular location

Nucleus  

Length:

236

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.59932

Exp number, first 60 AAs:

0.17292

Total prob of N-in:

0.07147

outside

1  -  236

 

 

Pi

192.622013

Theta

154.644057

Tajima's D

0.684983

CLR

0

CSRT

0.568121593920304

Interpretation

Uncertain