Gene

KWMTBOMO09246

Annotation

PREDICTED:_5-hydroxytryptamine_receptor_2B_[Bombyx_mori]

Location

Bomo_Chr15(+):14010548-14034020      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.304

CDS

ATGCCGACGCCGGATTTGTGCGTGATCAACAACAGGCTTTTCTGGATATTCGGGTCTCTGGTTGCGTTCTACATTCCGATGCTGACGATGGTGGTGTCTTTCGCACTAACCGTGCAGTTGCTAAAGAGACAGGCGAGGCTTGCTGCGACTCCCGTACCGGGAGGAACTCAGAGAAGGCAATGTGGAGGCTTTGATAATGGACCGATTCAGTGCGTGCGTCGCCTTGGAGCTAGGAGTTCACCAGATTTGTCTCCTGGAAGACCCGTGTCCAGACAGATGACTTGGAGAGTCACCAGTGCTAGATCACAAAGGAACAAGATCGGGATGAGCGTGTCTCATCCGCAGTTAAGCTACATGAATGGCTGTGGTACTGGCAAATCTAAGAGAAGAGGACACGATGTGGCCACACAGACTCCACCGAGCATAGCAGCAGAAACAAGAAGAGCAAGGTTGAGGCCGTTGAAGTTGACCCTGGCTACTCCAAATGCTTTGACTCTAAGATTCTTAGCGAACCGTAAAAAAGGAAGATCTCTATCAGCCAACGCAGTAGCCAACGAACAGAAAGCAACTAAAGTGTTGGGTCTGGTTTTCTTCACCTTTGTCCTGTGCTGGGCTCCGTTCTTTCTACTTAATATTCTATTTGCTGCCTGTCCTGCCTGCATTGTACCTGAGCATGTGGTCGACATCTGCTTGTGGTTGGGTTACGTGTCTTCTACCATCAACCCTATTATTTACACGGTCTTCAATAGGACGTTCAGAGCTGCTTTCCTGAGACTGTTAAAATGCCACTGCACAAGACGTGGTAGATGCACCAGATACCATTCAGTTGGTTCTACCCGTGGGGCTTCACAGCTATGCGCAAGATCAGCACTTCCTCTGGCCATCTCCCTGCGACCTTCGGGGCTGCCCATTCCCACACCAGCTGCGCAGGACACAACGGAAACAGTCCTGATGGATCCACCGCTCGGTGAATTCAATATGAGATATTAG

Protein

MPTPDLCVINNRLFWIFGSLVAFYIPMLTMVVSFALTVQLLKRQARLAATPVPGGTQRRQCGGFDNGPIQCVRRLGARSSPDLSPGRPVSRQMTWRVTSARSQRNKIGMSVSHPQLSYMNGCGTGKSKRRGHDVATQTPPSIAAETRRARLRPLKLTLATPNALTLRFLANRKKGRSLSANAVANEQKATKVLGLVFFTFVLCWAPFFLLNILFAACPACIVPEHVVDICLWLGYVSSTINPIIYTVFNRTFRAAFLRLLKCHCTRRGRCTRYHSVGSTRGASQLCARSALPLAISLRPSGLPIPTPAAQDTTETVLMDPPLGEFNMRY

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

S4USL2   A0A2A4JG34   A0A194PJT2   A0A194RP37   D6WIY2   A0A1L8DJP8   + More
A0A151JS71   A0A1L8DK94   F4WI30   A0A151WUS9   A0A151JVU5   E2C2P1   A0A158NMH4   A0A195AZ76   E2ASV6   A0A195CVR1   A0A182VRY9   A0A067RGM0   A0A068FNH1   A0A0L7R5I6   A0A087ZUT6   E5BBP1   A0A310SS60   N1NSY5   A0A182X380   A0A182HZI1   A0A026WFB9   A0A1J1IDL3   A0A336KPM4   A0A1W4W411   N6ULG2   A0A154PQN9   U5ETA7   A0A2A3ESE7   A0A182RH28   A0A182QNH7   A0A2P8Y678   A0A182NMQ9   A0A336M8J1   A0A1S4GEY1   A0A182J664   A0A1Q3FS96   A0A1Q3FS41   A0A182Y4N9   A0A0R1DZZ4   A0A084WR74   A0A182M9U9   A0A2S2NDP1   B0X0V2   Q7QK99   A0A182LQI6   A0A3R7LX23   A0A2H8TLT1   J9K7T1   A0A0N7ZD29   A0A2S2QJB0   A0A182V6T6   A0A2J7PE27   A0A182NZE2   A0A2M4CHW8   A0A2M4CHR4   A0A2M4CHI1   A0A2M4CHH8  

Pubmed

23922709    26354079    18362917    19820115    21719571    20798317    + More
21347285    24845553    18054377    18025266    18316733    20068045    21843505    23604020    24508170    30249741    23537049    29403074    12364791    25244985    17994087    17550304    24438588    20966253   

EMBL

JX891652    AGL76443.1    NWSH01001604    PCG70736.1    KQ459602    KPI93577.1    + More
KQ460106    KPJ17786.1    KQ971342    EFA04641.2    GFDF01007408    JAV06676.1    KQ978577    KYN30050.1    GFDF01007299    JAV06785.1    GL888172    EGI66123.1    KQ982727    KYQ51604.1    KQ981676    KYN38148.1    GL452201    EFN77797.1    ADTU01020498    ADTU01020499    ADTU01020500    KQ976697    KYM77543.1    GL442363    EFN63488.1    KQ977231    KYN04720.1    KK852696    KDR18267.1    KJ666537    AID67346.1    KQ414649    KOC66147.1    FR727107    CBX90120.1    KQ760995    OAD58497.1    BK005872    DAA64509.1    APCN01001978    KK107238    QOIP01000007    EZA54815.1    RLU20967.1    CVRI01000047    CRK98307.1    UFQS01000671    UFQT01000671    SSX06002.1    SSX26359.1    APGK01018860    APGK01018861    KB740085    ENN81511.1    KQ435007    KZC13664.1    GANO01002865    JAB57006.1    KZ288193    PBC34136.1    AXCN02001210    PYGN01000880    PSN39751.1    SSX06003.1    SSX26360.1    AAAB01008799    GFDL01004627    JAV30418.1    GFDL01004624    JAV30421.1    CM000160    KRK02614.1    ATLV01025952    ATLV01025953    ATLV01025954    ATLV01025955    ATLV01025956    ATLV01025957    KE525403    KFB52718.1    AXCM01003647    AXCM01003648    GGMR01002671    MBY15290.1    DS232246    EDS38344.1    EAA03698.2    QCYY01003082    ROT65477.1    GFXV01003155    MBW14960.1    ABLF02035947    ABLF02035948    ABLF02035958    ABLF02035960    ABLF02035962    ABLF02035964    GDRN01054333    JAI66096.1    GGMS01008605    MBY77808.1    NEVH01026112    PNF14586.1    GGFL01000661    MBW64839.1    GGFL01000621    MBW64799.1    GGFL01000606    MBW64784.1    GGFL01000622    MBW64800.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007266    UP000078492    UP000007755    + More
UP000075809    UP000078541    UP000008237    UP000005205    UP000078540    UP000000311    UP000078542    UP000075920    UP000027135    UP000053825    UP000005203    UP000076407    UP000075840    UP000053097    UP000279307    UP000183832    UP000192223    UP000019118    UP000076502    UP000242457    UP000075900    UP000075886    UP000245037    UP000075884    UP000075880    UP000076408    UP000002282    UP000030765    UP000075883    UP000002320    UP000007062    UP000075882    UP000283509    UP000007819    UP000075903    UP000235965    UP000075885   

Pfam

PF00001   7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       

ProteinModelPortal

S4USL2   A0A2A4JG34   A0A194PJT2   A0A194RP37   D6WIY2   A0A1L8DJP8   + More
A0A151JS71   A0A1L8DK94   F4WI30   A0A151WUS9   A0A151JVU5   E2C2P1   A0A158NMH4   A0A195AZ76   E2ASV6   A0A195CVR1   A0A182VRY9   A0A067RGM0   A0A068FNH1   A0A0L7R5I6   A0A087ZUT6   E5BBP1   A0A310SS60   N1NSY5   A0A182X380   A0A182HZI1   A0A026WFB9   A0A1J1IDL3   A0A336KPM4   A0A1W4W411   N6ULG2   A0A154PQN9   U5ETA7   A0A2A3ESE7   A0A182RH28   A0A182QNH7   A0A2P8Y678   A0A182NMQ9   A0A336M8J1   A0A1S4GEY1   A0A182J664   A0A1Q3FS96   A0A1Q3FS41   A0A182Y4N9   A0A0R1DZZ4   A0A084WR74   A0A182M9U9   A0A2S2NDP1   B0X0V2   Q7QK99   A0A182LQI6   A0A3R7LX23   A0A2H8TLT1   J9K7T1   A0A0N7ZD29   A0A2S2QJB0   A0A182V6T6   A0A2J7PE27   A0A182NZE2   A0A2M4CHW8   A0A2M4CHR4   A0A2M4CHI1   A0A2M4CHH8  

PDB

4NC3     E-value=4.03882e-21,     Score=249

KEGG

101742966    K04157 5-hydroxytryptamine receptor 2 | (RefSeq) 5-hydroxytryptamine receptor 2B

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0004930   GO:0016021   GO:0005887   GO:0030594   GO:0004993   GO:0030425   GO:0007268   GO:0007187   GO:0051378   GO:0007186   GO:0003676   GO:0000413   GO:0003723   GO:0003677   GO:0016020   GO:0016876   GO:0043039  

Length:

329

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

66.7038400000001

Exp number, first 60 AAs:

22.86072

Total prob of N-in:

0.01200

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  37

inside

38  -  191

TMhelix

192  -  214

outside

215  -  228

TMhelix

229  -  248

inside

249  -  329

 

 

Pi

275.496564

Theta

166.567229

Tajima's D

0.868691

CLR

0.584265

CSRT

0.620318984050797

Interpretation

Uncertain