Gene

KWMTBOMO09244

Annotation

PREDICTED:_5-hydroxytryptamine_receptor_2B_[Bombyx_mori]

Location

Bomo_Chr15(+):13986698-13990372      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.913

CDS

ATGACAGTTCTTAGGACGGAGGCACCGCTTTTCAAGAAGGCTGGTTGAAACTTAACGGCAGAAGTGCTGGCCAGTAAGGGATATGATTGGAGTTTTCTGTTTGTGATATTATTTATAGTAGCCGGGGGCTTAGGCAATATATTAGTGTGTTTGGCCGTTTGTCTGGACAAGAGACTACAAAACGTTACCAATTACTTTTTACTGTCGTTGGCCATCGCTGATCTGTTGGTTAGTCTGTTTGTGATGCCAATGGGAGCTATACCAGGATTTTTAGGATATTGGCCGTTGGGTGTGGTGTGGTGTAACGTGTACGTCACTTGCGATGTCTTGGCCTGCTCCGCCAGCATCATGCACATGTGTTTCATCAGTATCGGAAGGTATGTATTTTATGTTATTACTAGCTGA

Protein

MTVLRTEAPLFKKAGXNLTAEVLASKGYDWSFLFVILFIVAGGLGNILVCLAVCLDKRLQNVTNYFLLSLAIADLLVSLFVMPMGAIPGFLGYWPLGVVWCNVYVTCDVLACSASIMHMCFISIGRYVFYVITS

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

S4USL2   A0A2A4JUK5   A0A194PJT2   E9RJV4   A0A336KPM4   A0A336M8J1   + More
A0A2J7PE27   A0A067RGM0   A0A0L0CP80   A0A1I8NUB3   I7JWJ8   A0A1L8DK94   I7JA47   A0A084WR74   W5JH09   A0A1A9YKB9   A0A1S4GEY1   A0A1L8DJP8   A0A182RH28   A0A182NMQ9   A0A2M4BCJ9   A0A182QNH7   A0A1B0DP81   A0A182M9U9   A0A2A3ESE7   A0A2M4CHW8   A0A2M3YYT9   A0A1A9UZY4   A0A2M4CHH8   A0A2M3ZKP4   A0A2M4A7C5   A0A1J1IDL3   A0A195CVR1   A0A1W4W411   F4WI30   J9HSS9   A0A1I8MA80   A0A151JS71   A0A195AZ76   A0A0L7R5I6   A0A158NMH4   A0A151JVU5   E2ASV6   U5ETA7   A0A068FNH1   A0A087ZUT6   E5BBP1   A0A151WUS9   A0A2M4AAG5   Q7QK99   A0A2M4A7W4   A0A182Y4N9   A0A154PQN9   A0A2M4CHR4   N1NSY5   A0A182LQI6   A0A2M4CHI1   D6WIY2   B0X0V2   A0A026WFB9   W8BN48   E2C2P1   A0A1Q3FS96   A0A1Q3FS41   A0A2S2QKV8   A0A2S2QJB0   B4K4Q2   B4I3Q8   B4QVK2   A0A194RP37   B3M0F7   A0A1W4UQ29   Q296R1   A0A3B0K854   B4GET8   A0A2H8TLT1   B3P226   A0A0M3QY53   B4LZQ8   B4JH92   J9K7T1   B4NJ49   Q6AWQ4   Q9VN38   E1JJ46   A8JQT4   Q8IPN2   Q24511   A0A310SS60   A0A0P5K5N8   A0A0N7ZQX8   A0A0P5Y413   A0A0P5CVB9   A0A0P6BRE5   A0A164ZZ25   A0A0P6GQ13   A0A0P5WMB6   A0A0P6DDG9   A0A0P6E519   A0A0P6ILI7  

Pubmed

23922709    26354079    24845553    26108605    24438588    20920257    + More
23761445    12364791    21719571    17510324    25315136    21347285    20798317    25244985    18054377    18025266    18316733    20068045    21843505    23604020    20966253    18362917    19820115    24508170    30249741    24495485    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    7777527   

EMBL

JX891652    AGL76443.1    NWSH01000641    PCG75090.1    KQ459602    KPI93577.1    + More
AB618100    BAJ83481.1    UFQS01000671    UFQT01000671    SSX06002.1    SSX26359.1    SSX06003.1    SSX26360.1    NEVH01026112    PNF14586.1    KK852696    KDR18267.1    JRES01000091    KNC34168.1    HE856266    CCI55470.1    GFDF01007299    JAV06785.1    HE657271    CCF77366.1    ATLV01025952    ATLV01025953    ATLV01025954    ATLV01025955    ATLV01025956    ATLV01025957    KE525403    KFB52718.1    ADMH02001419    ETN62608.1    AAAB01008799    GFDF01007408    JAV06676.1    GGFJ01001606    MBW50747.1    AXCN02001210    AJVK01007965    AJVK01007966    AJVK01007967    AJVK01007968    AJVK01007969    AXCM01003647    AXCM01003648    KZ288193    PBC34136.1    GGFL01000661    MBW64839.1    GGFM01000689    MBW21440.1    GGFL01000622    MBW64800.1    GGFM01008345    MBW29096.1    GGFK01003321    MBW36642.1    CVRI01000047    CRK98307.1    KQ977231    KYN04720.1    GL888172    EGI66123.1    CH477435    EJY57683.1    KQ978577    KYN30050.1    KQ976697    KYM77543.1    KQ414649    KOC66147.1    ADTU01020498    ADTU01020499    ADTU01020500    KQ981676    KYN38148.1    GL442363    EFN63488.1    GANO01002865    JAB57006.1    KJ666537    AID67346.1    FR727107    CBX90120.1    KQ982727    KYQ51604.1    GGFK01004466    MBW37787.1    EAA03698.2    GGFK01003538    MBW36859.1    KQ435007    KZC13664.1    GGFL01000621    MBW64799.1    BK005872    DAA64509.1    GGFL01000606    MBW64784.1    KQ971342    EFA04641.2    DS232246    EDS38344.1    KK107238    QOIP01000007    EZA54815.1    RLU20967.1    GAMC01011754    JAB94801.1    GL452201    EFN77797.1    GFDL01004627    JAV30418.1    GFDL01004624    JAV30421.1    GGMS01009192    MBY78395.1    GGMS01008605    MBY77808.1    CH933806    EDW15028.2    CH480821    EDW54851.1    CM000364    EDX11627.1    KQ460106    KPJ17786.1    CH902617    EDV43163.2    CM000070    EAL28397.4    OUUW01000008    SPP84260.1    CH479182    EDW34123.1    GFXV01003155    MBW14960.1    CH954181    EDV47799.1    CP012526    ALC47019.1    CH940650    EDW68227.1    CH916369    EDV93799.1    ABLF02035947    ABLF02035948    ABLF02035958    ABLF02035960    ABLF02035962    ABLF02035964    CH964272    EDW83842.2    BT015194    AE014297    AAT94423.1    ACZ94804.1    AAF52113.1    ACZ94805.2    ABW08600.2    AAN13284.1    X81835    CAA57429.1    KQ760995    OAD58497.1    GDIQ01214846    JAK36879.1    GDIP01221313    JAJ02089.1    GDIP01063300    JAM40415.1    GDIP01165039    JAJ58363.1    GDIP01010817    JAM92898.1    LRGB01000687    KZS16974.1    GDIQ01030525    JAN64212.1    GDIP01084177    JAM19538.1    GDIQ01078791    JAN15946.1    GDIQ01082344    JAN12393.1    GDIQ01003721    JAN91016.1   

Proteomes

UP000218220    UP000053268    UP000235965    UP000027135    UP000037069    UP000095300    + More
UP000030765    UP000000673    UP000092443    UP000075900    UP000075884    UP000075886    UP000092462    UP000075883    UP000242457    UP000078200    UP000183832    UP000078542    UP000192223    UP000007755    UP000008820    UP000095301    UP000078492    UP000078540    UP000053825    UP000005205    UP000078541    UP000000311    UP000005203    UP000075809    UP000007062    UP000076408    UP000076502    UP000075882    UP000007266    UP000002320    UP000053097    UP000279307    UP000008237    UP000009192    UP000001292    UP000000304    UP000053240    UP000007801    UP000192221    UP000001819    UP000268350    UP000008744    UP000008711    UP000092553    UP000008792    UP000001070    UP000007819    UP000007798    UP000000803    UP000076858   

PRIDE

B4I3Q8    Q6AWQ4    Q9VN38    Q8IPN2    Q24511   

Pfam

PF00001   7tm_1        + More
PF00147   Fibrinogen_C

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR014716   Fibrinogen_a/b/g_C_1       
IPR002181   Fibrinogen_a/b/g_C_dom       
IPR036056   Fibrinogen-like_C       
IPR014715   Fibrinogen_a/b/g_C_2       

SUPFAM

SSF56496   SSF56496       

Gene 3D

3.90.215.10     4.10.530.10    

ProteinModelPortal

S4USL2   A0A2A4JUK5   A0A194PJT2   E9RJV4   A0A336KPM4   A0A336M8J1   + More
A0A2J7PE27   A0A067RGM0   A0A0L0CP80   A0A1I8NUB3   I7JWJ8   A0A1L8DK94   I7JA47   A0A084WR74   W5JH09   A0A1A9YKB9   A0A1S4GEY1   A0A1L8DJP8   A0A182RH28   A0A182NMQ9   A0A2M4BCJ9   A0A182QNH7   A0A1B0DP81   A0A182M9U9   A0A2A3ESE7   A0A2M4CHW8   A0A2M3YYT9   A0A1A9UZY4   A0A2M4CHH8   A0A2M3ZKP4   A0A2M4A7C5   A0A1J1IDL3   A0A195CVR1   A0A1W4W411   F4WI30   J9HSS9   A0A1I8MA80   A0A151JS71   A0A195AZ76   A0A0L7R5I6   A0A158NMH4   A0A151JVU5   E2ASV6   U5ETA7   A0A068FNH1   A0A087ZUT6   E5BBP1   A0A151WUS9   A0A2M4AAG5   Q7QK99   A0A2M4A7W4   A0A182Y4N9   A0A154PQN9   A0A2M4CHR4   N1NSY5   A0A182LQI6   A0A2M4CHI1   D6WIY2   B0X0V2   A0A026WFB9   W8BN48   E2C2P1   A0A1Q3FS96   A0A1Q3FS41   A0A2S2QKV8   A0A2S2QJB0   B4K4Q2   B4I3Q8   B4QVK2   A0A194RP37   B3M0F7   A0A1W4UQ29   Q296R1   A0A3B0K854   B4GET8   A0A2H8TLT1   B3P226   A0A0M3QY53   B4LZQ8   B4JH92   J9K7T1   B4NJ49   Q6AWQ4   Q9VN38   E1JJ46   A8JQT4   Q8IPN2   Q24511   A0A310SS60   A0A0P5K5N8   A0A0N7ZQX8   A0A0P5Y413   A0A0P5CVB9   A0A0P6BRE5   A0A164ZZ25   A0A0P6GQ13   A0A0P5WMB6   A0A0P6DDG9   A0A0P6E519   A0A0P6ILI7  

PDB

4NC3     E-value=6.98784e-21,     Score=241

KEGG

101742966    K04157 5-hydroxytryptamine receptor 2 | (RefSeq) 5-hydroxytryptamine receptor 2B

GO

GO:0004930   GO:0016021   GO:0007268   GO:0051378   GO:0007187   GO:0030425   GO:0030594   GO:0005887   GO:0004993   GO:2000253   GO:0005886   GO:0007377   GO:0007210   GO:0008227   GO:0001587   GO:0007186   GO:0003676   GO:0000413   GO:0003723   GO:0003677   GO:0016020   GO:0016876   GO:0043039  

Length:

134

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

69.36154

Exp number, first 60 AAs:

22.79768

Total prob of N-in:

0.00353

POSSIBLE N-term signal

sequence

outside

1  -  29

TMhelix

30  -  52

inside

53  -  64

TMhelix

65  -  87

outside

88  -  101

TMhelix

102  -  124

inside

125  -  134

 

 

Pi

270.32473

Theta

222.87258

Tajima's D

0.970548

CLR

0.251408

CSRT

0.654717264136793

Interpretation

Uncertain