SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09240  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003333
Annotation
PREDICTED:_uncharacterized_protein_LOC106707832_isoform_X1_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 2.65
 

Sequence

CDS
ATGCAGAGTCCTATACTGATATTGTTAGCTGCCTGCGTCAGCGTTCGCGCCATCGATGGCTCTGACAGCAAGTTTATGAAGGACTACGCCATGTTGAAGATCTACGAAAGCTGTTTCGGTTCTAATTTACTGAAACAGATCACAAAGGAGCTAAGAGACGCTTACTCAAAATGTTCAACAACGCCATCTATGAAGCAAACGCAGAACTCTTTGCCGTCTTACCTGAGTAACTTGGCGCCTGGCTTCGCTATGGATCCGACGCAGTCCAACGTCAAGCACACAGATGGCGCTATACAAAATGATGAAAACGATTTACCCAATCAAGAAGCTCCGCAATCACAGAAAGTCGGCGGGATATTCGCTTTTCGACCTCAAGGGGTTCCATTCCCTCAACCCGGAATGTCGCCATTCATGATGCCGGCCGGGCCGCAATTCCGCCCGTATAACCCGGCCATGTTCCAGCTGCCTTACCAGGGCTACCTGCCCCCGGGACTACCCTACAACCCCTACTATCCTCCGTACCAGTTCTACCAGCAACAGCCCTACGTCGGAGCCAATCGGATGTCTCGCCAAATCGGTCTTCGAACTCGACTGGGACTCCACGCGCCGCGCTCCGTCAATCACAACGTGACCTGCGTGATGCAGGAACTGGGTTACGTGGACGACAACATGGAACCGAACTTCGAACATATCAGAGCGAGGATCGGCAGCCTACCGGTCTCGGATGAACTCAAAGGCGACATCCAAGAGGGCCTTCAGTTCTGTCAGAAGTTTTCGCAATGCGTTCCGGAAGAGAAGCGTGATATAGTAGCCAGACCACAGGAACAGATCAGATCGATTTTCTTCTTCAGATGCTACAAGCACAAGAAACTAGAGGCGTGCATCATGAAGGACATCAATGAACACTTCGCCAAGGAATACGCTTTCGACCACGAGACGCCCGATTTCGCTTACTCCCGTTCAGGACGCTCTGCTCGCGACCTCCCCCTCAGAGATCCGAGCCTCGAAGCCTTGGAGGAAATGGAGGTGTACCTGTATGACTATCTTAGCGGAGGGGGCGCCTTCGATTTTGACCTCTACATCTAA
Protein
MQSPILILLAACVSVRAIDGSDSKFMKDYAMLKIYESCFGSNLLKQITKELRDAYSKCSTTPSMKQTQNSLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDENDLPNQEAPQSQKVGGIFAFRPQGVPFPQPGMSPFMMPAGPQFRPYNPAMFQLPYQGYLPPGLPYNPYYPPYQFYQQQPYVGANRMSRQIGLRTRLGLHAPRSVNHNVTCVMQELGYVDDNMEPNFEHIRARIGSLPVSDELKGDIQEGLQFCQKFSQCVPEEKRDIVARPQEQIRSIFFFRCYKHKKLEACIMKDINEHFAKEYAFDHETPDFAYSRSGRSARDLPLRDPSLEALEEMEVYLYDYLSGGGAFDFDLYI

Summary

Interpro
IPR036728   PBP_GOBP_sf       
SUPFAM
SSF47565   SSF47565       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.993517
 
 
Length:
361
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02056
Exp number, first 60 AAs:
0.02019
Total prob of N-in:
0.00257
outside
1  -  361
 
 

Population Genetic Test Statistics

Pi
177.936607
Theta
162.312243
Tajima's D
0.47954
CLR
0.944571
CSRT
0.507774611269437
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 DIVARPQEQIR 95.65 2e-09
29197581 GDIQEGIQFCQK 95.65 2e-09
26822097 IYESCFGSNIIK 100.00 2e-04
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