SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09235
Pre Gene Modal
BGIBMGA003413
Annotation
PREDICTED:_uncharacterized_protein_LOC101742672_[Bombyx_mori]
Location
Bomo_Chr15(+):13709798-13727800      View in EpiBrowser
Transcription factor
MBD
Location in the cell
Nuclear   Reliability : 4.367
 

Sequence

CDS
ATGAACAATACTAAAATCTCCAGCGAACCAGTAGAGAGCCTGGAGGCCATTCGTAAATACATTGAGGCCCAAGAAAGAGAACTGCAAGATTTAGAAAAAGATAAGAAGAAAACACACAGTACGGAACATGAGCCTCCTAGTCTGTCAGTAATAGAGAGCGATGTGGTGGCCAGTACCTCAAGCTTGATGGATATGTTGATTAACGAAACAGATGATAAATTGATAAATAAAAACAATAAAAGTGAAATCAGTAAATCGAATCAAAGTCCCCTTGATAAAGGTAACAGCAGTGTAGCCTTGTCAGTAGGGTCTAAGGTGGAAGCAAGGGATTTTGCCTACAACTGGCATCCGGCACTAATCACGGAGGTTGATTTTGAAGAGATGGAAGTTCTTGTACATTATGACCAGGATCTAAAAGGTGTTCTTAAGCCTGACGAATGGATCAGCGTGAACAGTCCCAGATTGAGACCGTTCGGAATGGTGACAAAATCAGCTTCCGGTACAGAGGAGAATACAAAGGTTTTGAAGGAGGAACCGCATGAGGTGAAACTCGAAGAAAAGTCTAAAGTGGTGTACGCTGTGGGAGAGAGGTGCTTGGCTCGTTGGAGAGACAACAGAAGGTTTATGGCTACCATACAAAAAGATTTAGGAAACGGCGCTTACGAGATTATATTCGACGATGGTTTCCTATGGAAATGTACAACAACAAGGTTGTACAAATGGAAACCGGGCAAACACGATACTCTCACGGTGGACACGAATATGCCTTCGCCTACAACGTCTGCGTCTTCGCCCATCCAAACCGGCGGGCCGATCAATTCGAACGCGCCCTCCACACCGGTTTTCTTCAACAACCATTTGTTTGATCCGAAACGCGACTATTTGAGTTCGAAAAGCGAACGTCGCGAAATGAAAAGGAAACTCAACATTAAGGAGATATTTAACATCGGCCAAAAGCGACAAAAGATACCGAAAGATAAGGACAAAGAAAAAGTGCCGACAGTGAGAAAACCTAGAATCCTTAAAAAGAGACGGAATATGAAGCCGGGGCCGGTTAAGGTGGAGACGACGAAGGCAGTAAATCAAAACGAGATCCCTGACGCAGTCGCATCAATAATCGGTACTCTGAAGAAAGAAGAATCACAAGACCCTGAAGCTACGTCTGAAGGTGTAACAGAAAACGAAACTCGATCTAATGTGGATGCAGCGAAAGTAGAGAGTAACGACTGTGATAATGTTAGTAAGCCAGTAGATACCCGTAAACAGATCTACAGTTTCGATAGCGATGAATATAAACTAGATTTCGACCCAGTATTAAAGGAGGAAGTTAAACTAGAGAAATTCGAAAAGATTGACGATTCCAAACACGAAGAAGTAATTGATAGAATCAAGGAAGTGATTAACAAACTTGAGGATGGCTTAAATAATGTTGACAAACCGCTGACACCTAAACCTTTTATTTTGAAACCGTCGACACCGAAATCGTCTGTACCCAAACCACCCACTCCAAAGCCAACGACTCCCAAACCAGAAACAACAGCACTTGAACCTCCAACTACAAATAACAGTGAACAGTCTGGAGAACAAATGTTAGCAGCAGAAGAATTAAGAGTAGAAGAGGTAGTAGATGTTGTTGAGAACACCGAAAAATTGCCAGTGGAGAGTGATTCAACAACAAGTATGGCAAATGTAAAGGATAAACCAAAGAAGCTATCGAAGATTAAGAAAGGAAAGAAACTGAGGTTGTTGCAAGAGAAAAAGGTAAAGAAACAAGTGGAGAAAGTGAAGAGCGAGTTAGAAGTGATGAAGAAGCAGATGAAGCAGATGAGGAAGGAGATGTTGCTGAAGACGCAGCAGCTTGCTAGTGGCGCGCAGATGCCGGAGAGCTTCATGCTTCCCGGCGAGTGGTGCTGCAAGTGGGTGGATGGGCAGCCCCTGGGCACCGTCAGCGAGATACCGTGCGAGGTCAAACTCGACGGGGACGGCAAACCGGGTTTGCCTCGGAGAAGTGTGCAGGTTGAAGACAAAAGACTGCCGCCCGGTTGGACGAAGCACATGGTGCGCCGGAGCCTAGGACATTCAGCCGGCAAGTGGGATGTTGTTTTGGTCAGCCCTAACAATCGCCGCTTCCACACGAAGACGGACATGCGAAATTTCTTGGAAAACAACGCAGATGTCTCACTGAAGGCTCACGAGAATGCTCTCATGGATTTTGGGTTGCACCTGAAGCTGTCCAGTCGCCTCGGCTGGATCACGCACACTCCGGAGGGCGTGGCCGAAGGGCCGACCCTACCATCTGGGCTGTTGAGTATCACGTCTCCGATCGTCAAGAAAAATAAGAAGTTTAGTCCGAACAAGGACGGGAAGAAGGAGAAGAAAAAGAAGAGGTTCACATTAAAATTGAAAATTCCTCGCTTTAAACTGAGCCAAAATGAAGACATGAAACCCGATGAAGACGTAACTAGCTGTGAGCCTTCGAGCTACGCATCTGGTGCCGATGCCCCACTCAACGATCCAGCTCTGGAACCTTTGGAAGATGGTTATGTATACGTGGGTTCATTAAAAGTTCAGATATCAGACAATCTGTTGAAGTGTCCGGCCGAAGGATGCTACAAGAATTTCCGAAACAGTGCCCTTCTACAGATGCATATTAAACACTATCACAGGGAGTTGAAGAAAATGTTAGGAGCGACCCCTAAAGTTCTTGATCTGGCCTATGCAAGAACTAAACCGGTCAGAGGTCAAGTTAAGAAGAAACCTAAAAGGCCAAGGGTGCTGAAACCGAAACGACTAGAGCCGAAAGCGGAGGCGTTTGAAATGAAACCGGACGCGTTGGAGTCTGCGCCCGTCACGCCGGACAGTACGGAGAGCTTCCTAAAGCTGCAAGACTCGCCGAAGCTCCGCGACGCGCTCGTCAGCAAACCGGTGAAGCGGCCTCGCGTGCTGCTGCCGGTCCGGCGTCCCGAAGACCAGGCATCCAACGAGGAAGTGCTGCAGGACAGCGAGTCCGACCTGGTCGGCGCTCAGACGCCCATCTTGGACTTCGAAACGGCCATATCGACACACACGGTCACCAAGCCTTTACTCGAGAAACTAAAGAGGGCTCACAACAGGAAGTTCGCGTCGGTTTCGCAGAAGCAAAGCGAAGACGAGGACTGGTTCATGGGCACGTCGGATGTGGACACTCGGTCTAGCTTCCCGGGCTCCGGGACTCCAGATTCCAAAAGCACGGACGTGAAACAGCATCAGCCCGTCTCGTCGGAATCCAACAACGAGGAAAAAGATAACAACATGTACATGTATAATGAAAGCGGGGAAAGAATTAAAATAGTACACATGAAGCGCGAAGAGATCATCAACTGCCACTGCGGGTTCCGCGAGGAGGACGGTCTGATGGTGCAGTGCGAGCTCTGTCTGTGCTGGCAACACGCGCTCTGCCACAACATACAGAGCGAGTCGCAGGTGCCCGAGAAGTACACGTGCAGCATATGCCTGAACCCGCGGCGCGGGCGGCGCTCTCGCCGGTTCGCGCACGAGCAGGAGCTGGAGTTCCAGGGGCGCGCGGCGGGCGGGCGGCCGCTGGGGGCGCTGCGCCGCGCGCACGAGCTGTCCGGGAACCTGCTGCGGCTGCGGGACTCGCTGCACGCGCTCGCCCTGCACTACCACGTCGCGCTTAAAAAGAATCATCCGAAATTATACCTCTGGGCCAAGGACTGGGATCAGGCTGAGGTAGCGCAGACCCAAGGGAAGTTTAATTCTGATTATTCTGACCTAAACATAATGATAAGCGCTTTGGGCAAAGAAAACCTGCCCATCAAACCCGAAGACGTTAGGGATCTGCAAATGGACGTGCGGTTGACGCCCGGTGAAGAGGACGGCGACAGGTTTCTTCAGCGCGACAGTCAGGCGGCGCCGACCGCTATGCTCGGCGGGATGCTTTCAAGTCCCGGTGGAACTTCCCTGGACTTGCCTATAAGCACTTCAGAGTTGGAAAAGTTGGCGAAATCCGTTGAAGAACAAGAGTTGGTGAGGGCGCCACAACCCGAGGCGGCCATAGACAATAACGTGTGCCGGGAACGACTTCTGCGGCACATTACGTGCTGCCAGGCTCTGCTCGACGCCAGACTAGACTCCATCGAAGCACAGGTCGCAGAATTAGAATCACAAGACCCATCGTTTGAAGATGATGAGACACCTGATTACTTTCCGCGGACAAAACAGACTGTTCAGATGCTGTTACGAGACCTTGACACCATGGAAGAATTGGCTCTCGTCACTTAG
Protein
MNNTKISSEPVESLEAIRKYIEAQERELQDLEKDKKKTHSTEHEPPSLSVIESDVVASTSSLMDMLINETDDKLINKNNKSEISKSNQSPLDKGNSSVALSVGSKVEARDFAYNWHPALITEVDFEEMEVLVHYDQDLKGVLKPDEWISVNSPRLRPFGMVTKSASGTEENTKVLKEEPHEVKLEEKSKVVYAVGERCLARWRDNRRFMATIQKDLGNGAYEIIFDDGFLWKCTTTRLYKWKPGKHDTLTVDTNMPSPTTSASSPIQTGGPINSNAPSTPVFFNNHLFDPKRDYLSSKSERREMKRKLNIKEIFNIGQKRQKIPKDKDKEKVPTVRKPRILKKRRNMKPGPVKVETTKAVNQNEIPDAVASIIGTLKKEESQDPEATSEGVTENETRSNVDAAKVESNDCDNVSKPVDTRKQIYSFDSDEYKLDFDPVLKEEVKLEKFEKIDDSKHEEVIDRIKEVINKLEDGLNNVDKPLTPKPFILKPSTPKSSVPKPPTPKPTTPKPETTALEPPTTNNSEQSGEQMLAAEELRVEEVVDVVENTEKLPVESDSTTSMANVKDKPKKLSKIKKGKKLRLLQEKKVKKQVEKVKSELEVMKKQMKQMRKEMLLKTQQLASGAQMPESFMLPGEWCCKWVDGQPLGTVSEIPCEVKLDGDGKPGLPRRSVQVEDKRLPPGWTKHMVRRSLGHSAGKWDVVLVSPNNRRFHTKTDMRNFLENNADVSLKAHENALMDFGLHLKLSSRLGWITHTPEGVAEGPTLPSGLLSITSPIVKKNKKFSPNKDGKKEKKKKRFTLKLKIPRFKLSQNEDMKPDEDVTSCEPSSYASGADAPLNDPALEPLEDGYVYVGSLKVQISDNLLKCPAEGCYKNFRNSALLQMHIKHYHRELKKMLGATPKVLDLAYARTKPVRGQVKKKPKRPRVLKPKRLEPKAEAFEMKPDALESAPVTPDSTESFLKLQDSPKLRDALVSKPVKRPRVLLPVRRPEDQASNEEVLQDSESDLVGAQTPILDFETAISTHTVTKPLLEKLKRAHNRKFASVSQKQSEDEDWFMGTSDVDTRSSFPGSGTPDSKSTDVKQHQPVSSESNNEEKDNNMYMYNESGERIKIVHMKREEIINCHCGFREEDGLMVQCELCLCWQHALCHNIQSESQVPEKYTCSICLNPRRGRRSRRFAHEQELEFQGRAAGGRPLGALRRAHELSGNLLRLRDSLHALALHYHVALKKNHPKLYLWAKDWDQAEVAQTQGKFNSDYSDLNIMISALGKENLPIKPEDVRDLQMDVRLTPGEEDGDRFLQRDSQAAPTAMLGGMLSSPGGTSLDLPISTSELEKLAKSVEEQELVRAPQPEAAIDNNVCRERLLRHITCCQALLDARLDSIEAQVAELESQDPSFEDDETPDYFPRTKQTVQMLLRDLDTMEELALVT

Summary

Uniprot
NA  
ProteinModelPortal
NA  
PDB
5TBN     E-value=3.65979e-10,     Score=161

Ontologies

KEGG
101742672    K18402 PHD finger protein 20 | (RefSeq) uncharacterized LOC101742672
GO
GO:0003677   GO:0005634   GO:0046872   GO:0005515   GO:0008270   GO:0008408   GO:0016020   GO:0016876   GO:0043039   GO:0003676  

Topology

Length:
1426
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0006
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  1426
 
 

Population Genetic Test Statistics

Pi
296.001382
Theta
20.942429
Tajima's D
0.355538
CLR
0.274862
CSRT
0.47607619619019
Interpretation
Uncertain
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