Gene

KWMTBOMO09233

Annotation

PREDICTED:_uncharacterized_protein_LOC106141019_[Amyelois_transitella]

Location

Bomo_Chr15(-):13696639-13698647      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.068 Mitochondrial   Reliability : 1.515 Nuclear   Reliability : 1.37

CDS

ATGCAAGTACATTCGTTTTGTAACTTTAAGGATTGTAAAGCTAAAATAATGGAATTTTTCGGAATCACTTCACATGGGCCTCAAAATTATATAAAAGAGTGCTTACGGGAAATATATAAGGAGCCAATGACAAAACAAGATTGTGTAAATTTAATGAAAATAATTGAACAAAAATCCTTACTTCCCAAAACGATCCAGAGACCTGATGTTAATACTATTAGATTCATTGACTGCTACATTGGGAGAGTGAATGGATTTGCATTAGGATCGATTGAGATATTTAAAAAAATGAAAAGGAAAGGTGTGATTAAACCAGTTGGCCCTTCTGATATGTACAGAATACCCATAACTACTTCTATAGAGTATGGGTGGTGGATGCAAGATGCAGAAGTGACGAATGCTTCGTGGTATAAATTAGAAAAAAGATACCCACAACCAGCTTCACCGAACACATTAATACTAGATAAAGTTCGAAAAAATAATAAATATGCTTCGCTATTTTAA

Protein

MQVHSFCNFKDCKAKIMEFFGITSHGPQNYIKECLREIYKEPMTKQDCVNLMKIIEQKSLLPKTIQRPDVNTIRFIDCYIGRVNGFALGSIEIFKKMKRKGVIKPVGPSDMYRIPITTSIEYGWWMQDAEVTNASWYKLEKRYPQPASPNTLILDKVRKNNKYASLF

Uniprot

A0A437B9H0   A0A212EXS0   A0A0L7LJZ9   A0A2A4K9I8   A0A2H1VXE3   A0A194PPR7   + More
A0A1Y1KU00   A0A0N1IK27   A0A1W4WDL1   A0A1D2MLK4   A0A226EWY5   A0A433TSZ6   A0A210PVS6   K1R1W7   A0A2H1CBM0   A0A369SHN4   B3SAZ0   A0A1X7UFS1   A0A1S3GZY9   A0A060XG19   F6SZB5   A7S008   A0A2C9L0H4   A0A0B7A3J8   A0A3M6U604   A0A0B7A3T9   A0A060WIT7   W5MKZ2   I3KK44  

Pubmed

22118469    26227816    26354079    28004739    27289101    28812685    + More
22992520    30042472    18719581    24755649    12481130    15114417    17615350    15562597    30382153    25186727   

EMBL

RSAL01000112    RVE47039.1    AGBW02011690    OWR46292.1    JTDY01000853    KOB75669.1    + More
NWSH01000012    PCG80877.1    ODYU01005012    SOQ45478.1    KQ459596    KPI95307.1    GEZM01075596    JAV64048.1    KQ459717    KPJ20318.1    LJIJ01000884    ODM93949.1    LNIX01000002    OXA61136.1    RQTK01000198    RUS84661.1    NEDP02005459    OWF40593.1    JH818676    EKC35100.1    KZ430023    PIS84879.1    NOWV01000015    RDD45523.1    DS985263    EDV20016.1    FR905298    CDQ78182.1    EAAA01000422    DS469559    EDO42881.1    HACG01027776    CEK74641.1    RCHS01002224    RMX48888.1    HACG01027774    HACG01027775    CEK74639.1    CEK74640.1    FR904560    CDQ66896.1    AHAT01032456    AERX01002673    AERX01002674   

Proteomes

UP000283053    UP000007151    UP000037510    UP000218220    UP000053268    UP000053240    + More
UP000192223    UP000094527    UP000198287    UP000271974    UP000242188    UP000005408    UP000253843    UP000009022    UP000007879    UP000085678    UP000193380    UP000008144    UP000001593    UP000076420    UP000275408    UP000018468    UP000005207   

Pfam

PF00687   Ribosomal_L1        + More
PF05458   Siva
PF14886   FAM183

Interpro

IPR038775   TEX49        + More
IPR023674   Ribosomal_L1-like       
IPR016095   Ribosomal_L1_3-a/b-sand       
IPR028364   Ribosomal_L1/biogenesis       
IPR022773   Siva       
IPR029214   FAM183       

SUPFAM

SSF56808   SSF56808       

Gene 3D

3.40.50.790    

CDD

cd00403  Ribosomal_L1

ProteinModelPortal

A0A437B9H0   A0A212EXS0   A0A0L7LJZ9   A0A2A4K9I8   A0A2H1VXE3   A0A194PPR7   + More
A0A1Y1KU00   A0A0N1IK27   A0A1W4WDL1   A0A1D2MLK4   A0A226EWY5   A0A433TSZ6   A0A210PVS6   K1R1W7   A0A2H1CBM0   A0A369SHN4   B3SAZ0   A0A1X7UFS1   A0A1S3GZY9   A0A060XG19   F6SZB5   A7S008   A0A2C9L0H4   A0A0B7A3J8   A0A3M6U604   A0A0B7A3T9   A0A060WIT7   W5MKZ2   I3KK44  

KEGG

101745458    no KO assigned | (RefSeq) uncharacterized LOC101745458

GO

GO:0005840  

PANTHER

PTHR35263   PTHR14365  

Length:

167

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1691

Exp number, first 60 AAs:

0

Total prob of N-in:

0.16410

outside

1  -  167

 

 

Pi

212.226807

Theta

189.860193

Tajima's D

0.487674

CLR

0

CSRT

0.507974601269937

Interpretation

Uncertain