SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09224
Pre Gene Modal
BGIBMGA003409
Annotation
PREDICTED:_putative_amine_transporter_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.995
 

Sequence

CDS
ATGACGATAGTCGTTATCGGCATAGCTGATTTTTGTAACGCAATCTGTGTCGCGCTGCAAGCTCCTTTTTATCCGAAAGAGGCTGAGAAGAAAGGGTGTACGGCCACAGAATATGGACTGGTGTTCGGGGTCTTCGAGTTAGTGGTGTTCATTGTGAGCCCCATCTATGGAGCCCATCTCAACAGGATCGGGCCGAAGCTACTGTTCAATACTGGCATATTGACAACCGGGACGTGTGCAATATTGTTCGGTTTACTAGATCGAGTAGAAGGCCATGTTCCCTTTATAACGCTCAGCTTTGTAATAAGAATCGTGGAGGCGATGGGAAACGCTGCCTTCCTGACCGCTTCTTTTGCTATAATAGCAAAGGAATTCCCTAACAACGTTGCCACCATGTTTGCGTCTATAGAAACGTTTTTCGGTTTGGGCCTCATCGTTGGTCCGACTCTGGGCGGAGCGCTGTACGGATTAGGCGGCTACAGTCTACCATTCGCCGTGCTTGGTTCGGCGCTGTTCTGCGCCGCGGTTATGAGCTGTTTCGCTTTACCAGCATACCACGACGACGAAGACCTGAAGCCCACCGGACCTACGATATTCACGTTGCTGCGGATCCCTGGCGTTTTATTGTCAGCAATCAGTATCATTTCGACGAGTATGAGCATTGGATTCCTTCAAGCGACTTTAGAGCCTCACTTACGACAGTTTGAATTTTCCCCCGTGATCCTGGGATTAATGTTCGTCATTAATGGAGGGGTGTACGCGGCCTCGGCTCCGGTCTGGGGTTGGATATGTGATCGGCCGGGAATGAAACCGAAATACGTGACGATCATCGGCTGTGCCTGTGTTGCTATAGGATTCCTGCTTATAGGACCAGCTCCTTTCTTTGATATGCCAACTATATTATGGGTGACCGTGATGGGCTTAGTGTTTCACGGCCTCGGGATCGGCAGCCAACTGGTGGCATCATTCTCCGATGCCCTGAACACATCTATTGCTAGTGGTCTACCAAACTCCATAGAGACGTATGGTCTGGTGTCTGGGATGTGGACGTCGGTCTTCGCTCTCGGAGCTTTCATCGGGCCGACGGTCTCTGGTCTCCTGTACGATTCCATCAAGTTCAGGGGCTCGACTTTATTCATATTCACGACACACGTTATCGTCATGGTGCTGGTGTTAATGTTCGTGTGGATTTGGGATCATACTGGATCTTTGGACGTTTCGGTTTCGTCGGGCGACTTGCTACAACTCGACGGGACCTTGGACGAGAGTGTACTGGTCGGAGACAAGTTCACTTTAAATCAGAAGAGAACGACGAGTCGCCGTTGCGGAATAAGCGTGGAGAAGTCTCGTCCGCCAGCTATGAACAGCTTGATCGCATGCTCCAGCTACAAGAATCGGCGCAGTCCCTGGTCTCAGCGCACTCCGCGGTACAGACCTACTTACGGAAGTCTGGACAACCGATACAGAGGGACTTACGGCACATAA
Protein
MTIVVIGIADFCNAICVALQAPFYPKEAEKKGCTATEYGLVFGVFELVVFIVSPIYGAHLNRIGPKLLFNTGILTTGTCAILFGLLDRVEGHVPFITLSFVIRIVEAMGNAAFLTASFAIIAKEFPNNVATMFASIETFFGLGLIVGPTLGGALYGLGGYSLPFAVLGSALFCAAVMSCFALPAYHDDEDLKPTGPTIFTLLRIPGVLLSAISIISTSMSIGFLQATLEPHLRQFEFSPVILGLMFVINGGVYAASAPVWGWICDRPGMKPKYVTIIGCACVAIGFLLIGPAPFFDMPTILWVTVMGLVFHGLGIGSQLVASFSDALNTSIASGLPNSIETYGLVSGMWTSVFALGAFIGPTVSGLLYDSIKFRGSTLFIFTTHVIVMVLVLMFVWIWDHTGSLDVSVSSGDLLQLDGTLDESVLVGDKFTLNQKRTTSRRCGISVEKSRPPAMNSLIACSSYKNRRSPWSQRTPRYRPTYGSLDNRYRGTYGT

Summary

EMBL
BABH01023807    BABH01023808    RSAL01000112    RVE47046.1    NWSH01000012    PCG80870.1    + More
PCG80871.1    KQ460106    KPJ17770.1    ODYU01001424    SOQ37591.1    ODYU01001425    SOQ37592.1    KQ459602    KPI93562.1    GAIX01004406    JAA88154.1    AGBW02014114    OWR42245.1    KQ971341    EFA03782.1    NEVH01011194    PNF31869.1    KQ976523    KYM82027.1    ADTU01010732    ADTU01010733    GL888074    EGI67973.1    KK852901    KDR14105.1    GL769168    EFZ10647.1    KK107494    QOIP01000006    EZA49851.1    RLU22111.1    DS235853    EEB18798.1    KQ981533    KYN40102.1    KQ980050    KYN18002.1    LJIG01000643    KRT86297.1    LBMM01001658    KMQ95930.1    GL453384    EFN76059.1    NNAY01000182    OXU30228.1    KQ982665    KYQ52575.1    GBYB01007373    JAG77140.1    KZ288331    PBC27900.1    GEZM01054412    JAV73672.1    KQ435762    KOX75427.1    GL434403    EFN74948.1    KQ435007    KZC13443.1    KQ978396    KYM94234.1    GBHO01031225    GDHC01008978    JAG12379.1    JAQ09651.1    GBRD01003482    JAG62339.1    ABLF02022989    GFXV01000532    MBW12337.1    GGMR01006893    MBY19512.1    GEDC01021291    JAS16007.1    KQ414598    KOC69871.1    ACPB03005497    ACPB03005498    GGMS01004013    MBY73216.1    JXUM01089594    JXUM01089595    KQ563782    KXJ73320.1    GANO01002308    JAB57563.1    GFDF01003964    JAV10120.1    AXCN02000202    ADMH02001255    ETN63413.1    APCN01002055    GFDL01014456    JAV20589.1    AAAB01008987    EAA01169.5    EGK97430.1    ATLV01013177    KE524842    KFB37444.1    GEBQ01021621    JAT18356.1    GECU01031237    GECU01025715    JAS76469.1    JAS81991.1    DS231965    EDS29509.1    GFDL01014713    JAV20332.1    GFDL01014790    JAV20255.1    GECZ01006740    JAS63029.1    UFQS01000069    UFQT01000069    SSW99001.1    SSX19383.1    CH478273    EAT33354.1    AXCM01017351    EAT33355.1    CVRI01000020    CRK90664.1    GDIQ01189170    JAK62555.1    GDIQ01208115    GDIQ01205412    JAK43610.1    GDIQ01234762    GDIQ01231992    GDIQ01229898    GDIQ01226003    GDIQ01226002    GDIQ01226001    GDIQ01177918    GDIQ01168926    GDIQ01165730    GDIQ01156069    GDIQ01147330    GDIQ01144826    GDIQ01131295    GDIQ01130293    GDIQ01125790    GDIQ01112687    GDIQ01106906    GDIQ01093643    GDIQ01086951    GDIQ01086950    GDIQ01086949    GDIQ01080706    GDIQ01063218    GDIQ01060718    GDIQ01039224    GDIQ01035080    GDIQ01034469    GDIQ01032075    GDIQ01029133    JAL39039.1    GDIP01204186    GDIQ01248193    GDIQ01234761    GDIQ01226000    GDIQ01190164    GDIQ01179418    GDIQ01165731    GDIQ01149171    GDIQ01147331    GDIQ01144825    GDIQ01131294    GDIQ01125789    GDIQ01112686    GDIQ01100299    GDIP01047465    GDIQ01085207    GDIQ01080705    GDIQ01063217    GDIQ01047972    GDIQ01035079    GDIQ01034470    LRGB01002384    JAJ19216.1    JAN14032.1    KZS07822.1    GDIQ01182117    JAK69608.1    GDIQ01187415    JAK64310.1    GDIQ01149170    JAL02556.1    GDIQ01251295    GDIQ01225090    GDIQ01222254    GDIQ01201209    GDIQ01198655    GDIQ01197297    GDIQ01190163    GDIQ01184821    GDIQ01182119    GDIQ01176312    GDIQ01143328    GDIQ01141673    GDIQ01137282    GDIQ01123944    GDIQ01118087    GDIQ01115147    GDIQ01097389    GDIQ01083657    GDIQ01067016    GDIQ01065617    GDIQ01050923    GDIQ01049474    GDIQ01044957    GDIQ01035078    JAK54428.1    GDIQ01252648    GDIQ01251294    GDIQ01245212    GDIQ01241599    GDIQ01225091    GDIQ01225089    GDIQ01223655    GDIQ01222253    GDIQ01201210    GDIQ01198654    GDIQ01197299    GDIQ01197298    GDIQ01184820    GDIQ01182120    GDIQ01180820    GDIQ01169973    GDIQ01153423    GDIQ01143327    GDIQ01141674    GDIQ01118086    GDIQ01115146    GDIQ01097390    GDIQ01083658    GDIQ01067017    GDIQ01055767    GDIQ01050924    GDIQ01049475    GDIQ01044958    GDIQ01042083    JAN11079.1    GDIQ01184819    GDIQ01182118    JAK69607.1    GDIQ01023222    JAN71515.1    LNIX01000066    OXA37023.1    GDIP01010984    JAM92731.1    APGK01051895    APGK01051896    KB741207    ENN72923.1    GDIP01075457    JAM28258.1    GL732553    EFX79124.1    GDIP01091398    JAM12317.1    GANO01002476    JAB57395.1   
Pfam
PF07690   MFS_1        + More
PF06585   JHBP
Interpro
IPR001958   Tet-R_TetA/multi-R_MdtG        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR010562   Haemolymph_juvenile_hormone-bd       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
494
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
261.36261
Exp number, first 60 AAs:
41.23638
Total prob of N-in:
0.91763
POSSIBLE N-term signal
sequence
inside
1  -  37
TMhelix
38  -  57
outside
58  -  66
TMhelix
67  -  86
inside
87  -  98
TMhelix
99  -  121
outside
122  -  135
TMhelix
136  -  157
inside
158  -  163
TMhelix
164  -  186
outside
187  -  205
TMhelix
206  -  228
inside
229  -  240
TMhelix
241  -  263
outside
264  -  272
TMhelix
273  -  295
inside
296  -  299
TMhelix
300  -  322
outside
323  -  345
TMhelix
346  -  368
inside
369  -  374
TMhelix
375  -  397
outside
398  -  494
 
 

Population Genetic Test Statistics

Pi
249.981439
Theta
167.285448
Tajima's D
2.408606
CLR
0.212709
CSRT
0.933103344832758
Interpretation
Uncertain
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