SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09223  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003342
Annotation
PREDICTED:_uncharacterized_protein_LOC106141628_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 1.007 PlasmaMembrane   Reliability : 1.397
 

Sequence

CDS
ATGGCTCGCCCTTTGATGCTGTCTTTCATTATATTGTGCTTGAGTGTTATATGTCACAATGGTGAGGCTGCGGAAAACGAGAACGCTCTAACGGCAACGCCGGAATACATTCTACCGTGTACACGAAGCGATCCACAACTCGATAATTGCATCAAGAACTCTTTCAACCACCTCCGTCCGTACCTGGCAAAGGGCCTGCCGGATCTGGAGCTTCCTCCGGTGGAACCTCTCTTTATTGATCGGCTGGTGATGGAAAACTCTGCCGGGCCAGTCAGGGTAACGGCTGCGTTCAGCAACATTACTGTAATAGGACCCAGTAATTACACTGTGACCAAGATCAGGTCGGATTTGAAGAAGTTGCGCATTGACCTCGGGCTGGTTCTACCTCGCATCGAGATCACAGGTCGTTACGAGGTGTCGGGACAAGTTCTCCTCTTCCCGGTTAGATCACGTGGAGACTTCTGGGCTGCGTTTATTGATGTAGCGGCCATAGCGAAGATCTTCGGTAAAGAGGTTGAGAGGGACAACGTGAGATACATGACGGCCGACAGATTGCTGGTTGATTTCAAACTGAGGAATTCGAGATTCAAAGTGAAAGACACCGTCAACCACGGAAGTGTTATTGGGGAAGCAATGAACCAGTTCCTGAACAACAATGCGGCTGAGATCATCGAGGAAATGCGACCGGCCGCCTCGGCGTCAATCGCCAAGCATTTCCAGTCGTTCATAAACGGCGCCTTCACGAAGATACCCATAGACGTGTGGCTCAAACCTTAG
Protein
MARPLMLSFIILCLSVICHNGEAAENENALTATPEYILPCTRSDPQLDNCIKNSFNHLRPYLAKGLPDLELPPVEPLFIDRLVMENSAGPVRVTAAFSNITVIGPSNYTVTKIRSDLKKLRIDLGLVLPRIEITGRYEVSGQVLLFPVRSRGDFWAAFIDVAAIAKIFGKEVERDNVRYMTADRLLVDFKLRNSRFKVKDTVNHGSVIGEAMNQFLNNNAAEIIEEMRPAASASIAKHFQSFINGAFTKIPIDVWLKP

Summary

EMBL
BABH01023807    ODYU01004753    SOQ44967.1    MF196304    ATU07286.1    NWSH01000012    + More
PCG80869.1    RSAL01000112    RVE47047.1    AK401442    BAM18064.1    AGBW02014114    OWR42244.1    JTDY01005749    KOB66670.1    KQ459602    KPI93561.1    NNAY01000182    OXU30229.1    GBYB01007372    JAG77139.1    KQ971341    KYB27715.1    NEVH01011194    PNF31867.1    GEDC01005273    JAS32025.1    GGMS01003652    MBY72855.1    GAPW01003567    JAC10031.1    CH478273    EAT33357.1    EAT33358.1    GFXV01002614    MBW14419.1    GAPW01003568    GAPW01003564    JAC10034.1    KK852901    KDR14106.1    DS231965    EDS29508.1    JXUM01089590    KQ563782    KXJ73319.1    ABLF02022988    JR039099    AEY58532.1    AJVK01010943    GAPW01003730    JAC09868.1    APGK01051899    KB741207    KB632029    ENN72924.1    ERL88130.1    KQ435762    KOX75426.1    KQ414598    KOC69870.1    GGFL01004752    MBW68930.1    GFDL01002415    JAV32630.1    GFDL01002423    JAV32622.1    GFDL01002413    JAV32632.1    GGFL01004758    MBW68936.1    GFDL01002428    JAV32617.1    KZ288331    PBC27901.1    ADMH02001255    ETN63414.1    KK107494    QOIP01000006    EZA49852.1    RLU22108.1    KQ435007    KZC13442.1    GAMD01001327    JAB00264.1    KQ982665    KYQ52577.1    APCN01002055    AAAB01008987    EGK97427.1    EGK97428.1    EGK97429.1    KQ980050    KYN18001.1    AXCN02000202    KQ981533    KYN40101.1    GL769168    EFZ10680.1    AXCM01011476    KQ976523    KYM82028.1    GL888074    EGI67974.1    ATLV01013177    KE524842    KFB37441.1    GL453384    EFN76060.1    KQ978396    KYM94235.1    AJWK01028283    AJWK01028284    AJWK01028285    GBBI01002853    JAC15859.1    CVRI01000047    CRK98545.1    ACPB03005497    GEBQ01018634    JAT21343.1    DS235853    EEB18799.1    ACPB03005486    KY031008    ATU82759.1    KQ971343    EFA03416.2    GBHO01001511    JAG42093.1    PYGN01001132    PSN37325.1    FM253347    CAR94537.1    OUUW01000008    SPP84589.1    CH954181    EDV47835.1    CM000160    EDW95715.1    CM000070    EAL28561.1    CH479182    EDW34356.1    CH480821    EDW54893.1    GDHC01002741    JAQ15888.1    GEBQ01026095    JAT13882.1    GBBI01002637    JAC16075.1    AE014297    BT132883    AAF52077.1    AEV23907.1   
Pfam
PF06585   JHBP
Interpro
IPR038606   To_sf        + More
IPR010562   Haemolymph_juvenile_hormone-bd       
Gene 3D
PDB
4G0S     E-value=1.22221e-05,     Score=114

Ontologies

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.998614
 
 
Length:
258
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.23045
Exp number, first 60 AAs:
0.07604
Total prob of N-in:
0.01129
outside
1  -  258
 
 

Population Genetic Test Statistics

Pi
273.804779
Theta
164.268974
Tajima's D
2.335207
CLR
0.419622
CSRT
0.928703564821759
Interpretation
Uncertain
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