SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09220
Pre Gene Modal
BGIBMGA003406
Annotation
seminal_fluid_protein_CSSFP066_[Chilo_suppressalis]
Location in the cell
Cytoplasmic   Reliability : 1.48
 

Sequence

CDS
ATGAGAGTGTTCGTTTTTTTAATTTTGTATGCGGTCTCTGTTTATGGGAGAGTGACGCCCGACTTCTTTCCTCAATGCAAGAGAAGCGATCCACAGATAGACAAGTGCGTTTTGGACGCCGTCGAGACAATGAGGCCTCGTCTGAAGACGGGCATTCCTGAAGTCAACATTCCGCCTTTAGACCCCTTCATGGTGCCAACGTTGAAACTGGACAGGACTGCTCCAAATCTGCGATTGAAAGCCACGATCAAACAAACTAAAGCCTTCGGGGGAAGTAACTTTAAGATTGAAAAGTTGAAGATTAACTTGAATAATAAGTACACAGGGGAGATTAAAATGGTTTTCCCAAAGTTGATGGTGGTTGCGGATTACGACGTGCGTGGCTCTAGAATTCTCACCCTGGACATAAATGGAAAAGGAAAACTCAGAGGAGAATTCACTGGAATAACAGTGGTTGCGAAGGGTCTAGCTAAGCCCATACAAAAGGACGGAGTTGAATATCTTCAGGTGGACAAGATTTTGACAAGAGTTAGAGTTAGTAATGCCCAGATCGGTTTCGATGACACGGAAAGACCACTGGCTGCCGCATCGGCTGCGTCATTCTTCAACTCGAGTCCTGGAGTCGTTCTGGACATCCTTAATCCTTTAATAGAAGAGACAAGTGCAGCCGTCATCAAAGCCTTCGTCAACAAGATCCTTGGAAACATACCCTTGCACGAGATACTCGTTGATGACGTACCATCCGCATAG
Protein
MRVFVFLILYAVSVYGRVTPDFFPQCKRSDPQIDKCVLDAVETMRPRLKTGIPEVNIPPLDPFMVPTLKLDRTAPNLRLKATIKQTKAFGGSNFKIEKLKINLNNKYTGEIKMVFPKLMVVADYDVRGSRILTLDINGKGKLRGEFTGITVVAKGLAKPIQKDGVEYLQVDKILTRVRVSNAQIGFDDTERPLAAASAASFFNSSPGVVLDILNPLIEETSAAVIKAFVNKILGNIPLHEILVDDVPSA

Summary

EMBL
BABH01023807    RSAL01000112    RVE47050.1    JN033761    AEW46914.1    NWSH01000012    + More
PCG80866.1    KT443976    ANC68524.1    ODYU01004753    SOQ44970.1    AK401660    BAM18282.1    KQ459602    KPI93559.1    AGBW02014114    OWR42242.1    GDHC01004605    JAQ14024.1    GBHO01044173    GBHO01044170    GBHO01044168    GBHO01044167    GBHO01024553    GBHO01024552    GBHO01024550    GBHO01024548    GBHO01024547    GBHO01024546    GBHO01011077    GBRD01009918    GBRD01009917    GBRD01009916    GBRD01009915    GBRD01009914    JAF99430.1    JAF99433.1    JAF99435.1    JAF99436.1    JAG19051.1    JAG19052.1    JAG19054.1    JAG19056.1    JAG19057.1    JAG19058.1    JAG32527.1    JAG55906.1    GEDC01018685    JAS18613.1    NEVH01011194    PNF31863.1    ACPB03005485    ACPB03005486    GEBQ01002792    JAT37185.1    KK852901    KDR14110.1    GECU01021149    JAS86557.1    GEMB01000769    JAS02369.1    GFTR01004158    JAW12268.1    KQ971342    EFA03574.1    GFXV01007597    MBW19402.1    GGMR01017959    MBY30578.1    KQ976523    KYM82030.1    ABLF02029361    AK341409    BAH71809.1    GL434403    EFN74950.1    ADTU01010724    ADTU01010725    ADTU01010726    GGMS01002403    MBY71606.1    KQ981533    KYN40097.1    BT127017    AEE61979.1    KQ978396    KYM94238.1    GBYB01008776    JAG78543.1    KQ414598    KOC69864.1    APGK01037636    KB740948    KB632364    ENN77408.1    ERL93588.1    KQ980050    KYN17999.1    KZ288331    PBC27903.1    KQ982665    KYQ52579.1    KQ435007    KZC13439.1    KQ971343    EFA03416.2    KK855329    PTY22047.1    KK107494    QOIP01000006    EZA49855.1    RLU22115.1    DS235853    EEB18809.1    GL769168    EFZ10659.1    GFXV01004915    MBW16720.1    KY031008    ATU82759.1    KQ435762    KOX75421.1    LBMM01004304    KMQ92589.1    KMQ92587.1    GL448228    EFN85083.1    GBYB01005200    JAG74967.1    EFA03557.2    EEB18802.1    AAZX01004562    DS231965    EDS29508.1    GGMR01018558    MBY31177.1    GDHC01002741    JAQ15888.1    GFXV01001379    MBW13184.1    RVE47047.1    CH954181    EDV47836.1    GGFJ01008707    MBW57848.1    NNAY01000182    OXU30230.1    GFDL01002415    JAV32630.1    GFDL01002413    JAV32632.1    GBHO01001511    JAG42093.1    KYQ52578.1    GFDL01002423    JAV32622.1    GFDL01002428    JAV32617.1    GEZM01091384    JAV56868.1    GEZM01038671    GEZM01038670    JAV81569.1    FX982943    BAU20269.1    RLU22109.1    GAPW01003568    GAPW01003564    JAC10034.1    ABLF02027644    KC571945    AGM32444.1    GAPW01003567    JAC10031.1    EZA49852.1    RLU22108.1    CH478273    EAT33357.1    EAT33358.1    EZA49853.1    GGFM01005492    MBW26243.1    ERL93580.1    APGK01037641    ENN77415.1    GGFL01004752    MBW68930.1    APGK01037640    BT127663    AEE62625.1    ENN77414.1    ADMH02001255    ETN63418.1    EDV49094.1   
Pfam
PF06585   JHBP
Interpro
IPR010562   Haemolymph_juvenile_hormone-bd        + More
IPR038606   To_sf       
IPR017943   Bactericidal_perm-incr_a/b_dom       
SUPFAM
SSF55394   SSF55394       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.992220
 
 
Length:
249
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.550210000000001
Exp number, first 60 AAs:
0.5458
Total prob of N-in:
0.03841
outside
1  -  249
 
 

Population Genetic Test Statistics

Pi
305.283308
Theta
177.495582
Tajima's D
2.733784
CLR
0.498543
CSRT
0.966601669916504
Interpretation
Uncertain
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