SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09218  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003343
Annotation
NA
Location in the cell
Nuclear   Reliability : 3.32
 

Sequence

CDS
ATGCAATCAATATTTGAACACGAATTCGATAATTTGATACCGTTGTCCAAAACCAATGACAAGGTGCCCGGAGCAGTGATGCTGTCTTTACCTTCCAAAAAAAAAATCATGATCGACTTGTCAGGGAAGAGAACTATGTGCCCAATACGGCCCAAACTACGTCGGACAATCAATATCATCATGAATTTGACCAGCGAACAGAATTCTAAAGCTAATCCTGATGGGAAAATATCAACAGATTCTAAGTCTGTTATAGAAAACGGTATAAACGGACCGAAGATAAACGATCAATCCGTTTCGAAATCTCCTAATTCCAATTCTGTTGTTGATGTTGCATTATTTATGGACGAGGCAAAAGCTAATGACCCTATCGTTTCTTCGGTAAAAACAGATACTAGTATCAATAATGAACCAGACACAGCTGCAAAAGGCCAAGATGCTGTAAATCCTTCACAGCATACTAATTCTGATCCATTGATATCTCCAACCGCGAGCGACGTGACCGATCTCAATGCCAACGGAGGAAAAAACGATGTATCAAAGCAAACGGATGCGTCAAAACAGGGCGATGCATCAAAACAACCTGATGGATTAGAAAAGGCTGATGCGTCAAAGGAGGGTGATGTCTCCAAACAGGCTGATTCGCCAAAACAGACTGATGCATCAAAACAGGCCGATGCGTCAACACAACCTGATAGATTAGAAAAGGCTGATGCATCAAAGGAGGGTGATGTCTCCAAACAGGCTGATTCGTCAAAACAGACTGATGCATCAAAACAGGCCGATACATCAACACAACCTGATGGATTAGAAAAGGCAGATGCATCAAAAGAGGGTGATGTCTCCAAACAGGCTGATCCGTCTAAACAGGCCGATGCATCAACACAACCTGATGGATTAGAAAAGGCCGATGCGTCAAAAGGGGGTGATATCTCGAAACAGGCTGAACCATCAAACAAAGCTGATGCATCAAAGCAAACTGATGGATTAGAAAAGGCTGATACGTCAAAAGACGGTGCTGTCTCTGAACAGGCCGATCCGTCAAAACAGGTTGATTCATCAAAACAAATTGATGGATTAGAAAAGGCAGATGCGTCAAAAGAGGGTGATATCTCGAAACAGGCTGAACCGTCAAACCAAGCTGATGCATCAAAACAGCCTGATGCATCGAAACAGGCAGCTTCAGAAAACCCCGGCGCACCAAAAGATTCCACTATTTCATCCAGTGAAAAACCTAATGAATCAGCTTCAATAGTCAGTCCTGCAGATACGCCGGAGAATCCTCCAGTAGCCCAATCTACTCCGGACGCGTCTGGTTCTCCTACGAATTCAAACCCTGACTCTGGCTCTTCTCCAGCACCTGAAACACCAAAATCTCCGAATGGTTCGAACGAGGCCACTGCAGACGCCGCAGCATCAGGTCTTGCGGTAAACGGCAAAACAAACAACGGAGGAGATTCCATAAACTTGACTCAGGCAACAGCAAACAGTGACGTTTCTACGAGTAATACTACCACCTAA
Protein
MQSIFEHEFDNLIPLSKTNDKVPGAVMLSLPSKKKIMIDLSGKRTMCPIRPKLRRTINIIMNLTSEQNSKANPDGKISTDSKSVIENGINGPKINDQSVSKSPNSNSVVDVALFMDEAKANDPIVSSVKTDTSINNEPDTAAKGQDAVNPSQHTNSDPLISPTASDVTDLNANGGKNDVSKQTDASKQGDASKQPDGLEKADASKEGDVSKQADSPKQTDASKQADASTQPDRLEKADASKEGDVSKQADSSKQTDASKQADTSTQPDGLEKADASKEGDVSKQADPSKQADASTQPDGLEKADASKGGDISKQAEPSNKADASKQTDGLEKADTSKDGAVSEQADPSKQVDSSKQIDGLEKADASKEGDISKQAEPSNQADASKQPDASKQAASENPGAPKDSTISSSEKPNESASIVSPADTPENPPVAQSTPDASGSPTNSNPDSGSSPAPETPKSPNGSNEATADAAASGLAVNGKTNNGGDSINLTQATANSDVSTSNTTT

Summary

Uniprot
ProteinModelPortal
PDB
6QX9     E-value=0.0377096,     Score=88

Ontologies

GO

Topology

Length:
506
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00076
outside
1  -  506
 
 

Population Genetic Test Statistics

Pi
257.523374
Theta
203.871725
Tajima's D
0.855728
CLR
0.000122
CSRT
0.617819109044548
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 YIDHIIQHIPYDEIVVD 100.00 4e-04
29197581 QADTSTQPDGIEK 100.00 0.017
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