SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09215  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003345
Annotation
juvenile_hormone_binding_protein_brP-1649_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.913
 

Sequence

CDS
ATGCATAAATTCGTGGCGTTGTTTTTGATCGCGACAGTGATACCGCTGAAAACGAATGCAAACATATTCGGAGGGAAATGTTCAAGACAAGATCCAAACGTAGACGCTTGTCTTCTAAGGAGTTTCAACAACCTCGTTGACTACTTGAAGGGAGGAGCTCCTGAGATGGGCATCGAAGAGGCTGAGCCCATTGTGATAGACGAACTGTCTATAGCCCTAGGAGCTGGTCCCGACGGTTACAGAGCAACCTTCAAAGACATCCATGCGTCAGGAGCATCGAACATGACCATCACTAACGTCAGGTCGGACCTAGAGACCCATCAGTTCCAGCTGACGCTGTACGGACCTCACATCAGCGCCCGCGCTCGGTACCGCTCCTCAGGAGTTCTGCTGCTGGTCAGAGCTTCAGGCGGCGGCGAGTACTGGGGCGAATACCATGGCGTCAAGGCCAAGGTGTACTTCCGCGGCGCTCCGTACGAACGCGACGGACGAACTTACCTGAAGCTGCAACAGCTGAAGCTAGATTTCTCCGTAAAGGACATCAAGATGGGCGTTGAGAATTTGGATAACTCAAACGCCGTACTCCAGGCTGCATTGAACCTCTTCATCAGTACGAACGCTCAAGAGCTCCTGAAGGAAATGAAGCCGGAACTGAAGAGGGACTTGGCGGATAAGATGTCGCGTTATTTAGACCACATCCTCCAGCACATACCTTACGACGAGCTGGTCGTTGATTAA
Protein
MHKFVALFLIATVIPLKTNANIFGGKCSRQDPNVDACLLRSFNNLVDYLKGGAPEMGIEEAEPIVIDELSIALGAGPDGYRATFKDIHASGASNMTITNVRSDLETHQFQLTLYGPHISARARYRSSGVLLLVRASGGGEYWGEYHGVKAKVYFRGAPYERDGRTYLKLQQLKLDFSVKDIKMGVENLDNSNAVLQAALNLFISTNAQELLKEMKPELKRDLADKMSRYLDHILQHIPYDELVVD

Summary

EMBL
AB196705    AB383140    BAE43413.1    BAH97096.1    BABH01023790    BABH01023791    + More
BABH01023792    GDQN01004420    JAT86634.1    KY411162    ARD05168.1    NWSH01000012    PCG80861.1    MF196299    ATU07281.1    ODYU01001718    SOQ38309.1    RSAL01000116    RVE46851.1    AK402513    BAM19135.1    AK401250    BAM17872.1    KQ459602    KPI93553.1    KQ460106    KPJ17762.1    KQ971343    EFA03555.2    GEBQ01026095    JAT13882.1    GBBI01001339    JAC17373.1    KF924038    AHW46052.1    JTDY01000876    KOB75590.1    DS235853    EEB18806.1    GFXV01005130    MBW16935.1    GBRD01011267    JAG54557.1    GBHO01014297    GDHC01001952    JAG29307.1    JAQ16677.1    KK852901    KDR14113.1    DS231965    EDS29505.1    GAMC01006088    JAC00468.1    ACPB03009186    GAHY01002143    JAA75367.1    NEVH01011194    PNF31917.1    UFQT01001318    SSX30012.1    UFQS01001286    UFQT01001286    SSX10124.1    SSX29846.1    GDHF01008269    JAI44045.1    GFDL01004525    JAV30520.1    GAKP01012246    GAKP01012245    GAKP01012244    JAC46707.1    GEDC01005883    JAS31415.1    APGK01037639    APGK01037640    KB740948    ENN77413.1    JXJN01007772    GBXI01003544    JAD10748.1    KK107899    QOIP01000006    EZA47286.1    RLU22107.1    GL448228    EFN85087.1    CH916374    EDV91224.1    KQ435830    KOX71718.1    KQ435007    KZC13435.1    CH940652    EDW59759.1    LBMM01001712    KMQ95854.1    JRES01001227    KNC24459.1    AAZX01011544    KZ288331    PBC27906.1    KQ981533    KYN40085.1    CM000070    EAL28561.1    CH479182    EDW34356.1    CP012526    ALC45394.1    OUUW01000008    SPP84589.1    KQ976523    KYM82037.1    ADTU01010698    ADTU01010699    AY071299    AAL48921.1    CH480821    EDW54893.1    GL439444    EFN67286.1    CH964272    EDW84266.1    CM000160    EDW95715.1    AE014297    BT132883    AAF52077.1    AEV23907.1    CH954181    EDV47835.1    BT132726    AER29916.1    CH902617    EDV44322.1    GDAI01002345    JAI15258.1    KQ982665    KYQ52588.1    CH933806    EDW15937.1    CVRI01000073    CRL07753.1    KQ414598    KOC69859.1    ATLV01013177    KE524842    KFB37436.1    JXUM01067194    KQ562438    KXJ75912.1    JXUM01075186    JXUM01075187    KQ562874    KXJ74947.1    CH478008    EAT34431.1    ADMH02001255    ETN63417.1    AGB95653.1    NNAY01000182    OXU30235.1    GECU01002324    JAT05383.1    AAAB01008987    EAA01266.2    AXCN02000202    GBYB01001705    JAG71472.1    KQ977412    KYN02899.1    APCN01002054   
Pfam
PF06585   JHBP
Interpro
IPR010562   Haemolymph_juvenile_hormone-bd        + More
IPR038606   To_sf       
Gene 3D
PDB
4G0S     E-value=8.9654e-09,     Score=141

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.995018
 
 
Length:
245
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.781239999999999
Exp number, first 60 AAs:
0.77729
Total prob of N-in:
0.01875
outside
1  -  245
 
 

Population Genetic Test Statistics

Pi
280.140959
Theta
203.670715
Tajima's D
1.101237
CLR
0.695199
CSRT
0.691665416729164
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
24093152 ASDITAADIRK 100.00 5e-06
29197581 MEEENTPNVSIISCMHFVQR 100.00 5e-06
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