Gene

KWMTBOMO09205  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003397

Annotation

ribosomal_protein_S8_[Bombyx_mori]

Location

Bomo_Chr15(+):13202294-13204776      View in EpiBrowser

Full name

40S ribosomal protein S8      

Location in the cell

Mitochondrial   Reliability : 1.873 Nuclear   Reliability : 2.427

CDS

ATGGGTATTAGTCGGGATCACTGGCATAAGCGAAGGGCCACCGGTGGGAAACGTGCGCCCATACGCAAGAAGAGGAAGTATGAGTTAGGGCGTCCCGCTGCAAACACCAGGCTCGGCCCTCAGCGAATCCACTCCGTTCGTTCACGTGGTGGAAATACTAAGTACCGTGCGCTGCGTCTGGACACCGGTAACTTCTCTTGGGGATCGGAATGTTCAACTCGCAAAACCCGTATCATTGATGTTGTGTATAATGCATCTAACAATGAATTGGTGCGTACAAAGACCCTTGTCAAGAATGCAATTGTTGTAGTAGATGCAACTCCATTCAGGCAGTGGTATGAGTCGCATTATACGTTGCCTCTTGGGAGGAAGAAGGGAGCGAAACTGACTGAGGCTGAGGAAGCTATTATCAACAAGAAGAGAAGTCAAAAGACAGCAAGAAAATACTTGGCAAGGCAACGTCTTGCTAAGGTTGAGGGTGCTCTAGAAGAGCAATTCCACACAGGGCGTTTGCTGGCTTGCGTGGCGAGTCGCCCAGGTCAGTGTGGTCGCGCCGATGGTTACATCTTAGAAGGCAAAGAACTCGAGTTCTATCTAAGAAAGATCAAGTCTAAGAGGGCGAAGTAA

Protein

MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK

Similarity

Belongs to the eukaryotic ribosomal protein eS8 family.

Keywords

Ribonucleoprotein   Ribosomal protein   Complete proteome   Reference proteome  

Feature

chain  40S ribosomal protein S8

Uniprot

Q5UAN6   D1LYM0   Q8WQI5   A0A2H1W6B1   A0A2A4K5A2   A0A0K8S974   + More
A0A3S2LB03   A0A1E1WMW1   A0A0L7LTY5   S4NX11   A0A0B5KT02   A0A3G1T1H4   Q6F475   A0A343EU18   G0ZEE3   E7DZ25   I4DLZ0   A0A194RJM3   I4DIG5   A0A212ENP2   A0A0J7KMH4   A0A348G686   E2AJ14   A0A0J7L1D8   F4WTB9   A0A158NMT5   A0A087ZV06   V9IK83   A0A151JMB6   A0A195EX66   A0A3L8D488   A0A2A3E770   A0A0C9PNX1   A0A195C6A1   O76756   A0A154PP56   A0A0L7R0G0   A0A0M9A0G1   A0A0U2V9I6   A0A3R7Q994   Q4GXT8   A0A1B6EX12   A0A1B6CEV8   I6P6T7   A0A1B6LQE3   A0A0U2TK61   A0A226EPG7   R4G5A0   A0A0N0BGE3   K7IWE3   A0A0N7Z9C6   A0A0U2T8R3   A0A411G842   A0A1Y1LHI4   K4GE94   R4WD83   Q6EUZ9   A0A0A9WSI1   A6YPI3   A0A161M8M3   A0A3Q3JWV9   A0A1D1XSX2   E2BN59   A0A3P8X2N2   A2Q0S3   C3KGU8   A0A1I9WLI8   A0A3Q3E161   A0A2U9BI76   I3KPR7   A0A3B4TUG4   A0A3B4F3G8   A0A3Q4HAS5   A0A3P9DEH9   G7MGN4   A0A3Q3E0B6   Q5DVI5   A0A3Q3XMY9   A0A2P8YRB7   J3JXL6   A0A0T6B5B3   D6WJB9   A2I496   A0A0U2V8D7   L5KPL3   A0A2K6EU01   A0A1D2N4V8   D1M805   K4G3H9   K4GKV3   V5GSZ3   K4GBK3   K4G564   G3UCL9   A0A2Y9DC71   K4GC33   W5NSP2   A0A1U7QH16   A0A250YC65   H0UUK1  

Pubmed

19121390    14668217    26227816    23622113    22651552    26354079    + More
22118469    20798317    21719571    21347285    30249741    26621068    28043022    23569222    30926861    20075255    27129103    28004739    23056606    23691247    25401762    26823975    18207082    24487278    17608926    27538518    25186727    22002653    29403074    22516182    23537049    18362917    19820115    23258410    27289101    24402279    20809919    28087693    21993624   

EMBL

BABH01023779    AY769322    AAV34864.1    GU084294    ACY95327.1    AY072291    + More
ODYU01006606    SOQ48598.1    NWSH01000144    PCG79098.1    GBRD01016127    JAG49699.1    RSAL01000296    RVE42826.1    GDQN01002766    JAT88288.1    JTDY01000092    KOB78925.1    GAIX01012347    JAA80213.1    KM923786    AJG43845.1    MG992409    AXY94847.1    AB180415    BAD26659.1    MF067291    ASM61889.1    JF265021    AEL28852.1    HQ424728    ADT80672.1    AK402308    BAM18930.1    KQ460106    KPJ17752.1    AK401083    KQ459602    BAM17705.1    KPI93539.1    AGBW02013624    OWR43104.1    LBMM01005526    KMQ91454.1    FX985628    BBF97959.1    GL439921    EFN66603.1    LBMM01001445    KMQ96299.1    GL888334    EGI62582.1    ADTU01020803    JR049279    AEY60916.1    KQ978946    KYN27398.1    KQ981940    KYN32741.1    QOIP01000014    RLU14823.1    KZ288345    PBC27613.1    GBYB01002823    JAG72590.1    KQ978231    KYM96160.1    AF080430    KQ435007    KZC13642.1    KQ414670    KOC64328.1    KQ435783    KOX74637.1    KT755100    KY357906    ALS04934.1    AQS22822.1    QCYY01004671    ROT60631.1    AM048935    CAJ17173.1    GECZ01027546    JAS42223.1    GEDC01025325    JAS11973.1    JQ771352    AFD93383.1    GEBQ01014085    JAT25892.1    KT754751    ALS04585.1    LNIX01000003    MH637989    OXA58466.1    QBH73379.1    ACPB03018093    GAHY01000705    JAA76805.1    KOX74668.1    GDKW01000923    JAI55672.1    KT755254    ALS05088.1    MH366257    QBB02066.1    GEZM01059548    JAV71435.1    JX212306    AFM90620.1    AK417309    BAN20524.1    AJ783872    CAH04320.1    GBHO01032860    GBHO01032859    GBRD01017914    GDHC01004556    JAG10744.1    JAG10745.1    JAG47913.1    JAQ14073.1    EF638994    ABR27879.1    GEMB01000117    JAS02994.1    GDJX01022445    JAT45491.1    GL449385    EFN82821.1    AB291561    BAF45896.1    BT082163    BT082172    ACQ57870.1    KU341337    KU932372    ALU11322.1    APA34008.1    CP026249    AWP03703.1    AERX01019660    CM001253    EHH14717.1    AJ843081    CAH57693.1    PYGN01000414    PSN46783.1    APGK01040748    BT127985    KB740984    KB631904    AEE62947.1    ENN76264.1    ERL87092.1    LJIG01009704    KRT82547.1    KQ971343    EFA04453.1    EF070599    ABM55665.1    KT754636    ALS04470.1    KB030630    ELK13135.1    LJIJ01000214    ODN00317.1    GU120429    ACY71279.1    JX207327    AFM85641.1    JX211233    AFM89547.1    GALX01003714    JAB64752.1    JX212370    AFM90684.1    JX208406    JX208881    JX209115    JX211002    JX211232    JX211823    JX211967    JX212292    JX212343    JX212416    JX212448    JX212475    JX212610    JW877915    AFM86720.1    AFM87429.1    AFM89316.1    AFM89546.1    AFM90606.1    AFP10432.1    JX212605    AFM90919.1    AMGL01001174    AMGL01001175    GFFW01003581    JAV41207.1    AAKN02055181   

Proteomes

UP000005204    UP000218220    UP000283053    UP000037510    UP000053240    UP000053268    + More
UP000007151    UP000036403    UP000000311    UP000007755    UP000005205    UP000005203    UP000078492    UP000078541    UP000279307    UP000242457    UP000078542    UP000076502    UP000053825    UP000053105    UP000283509    UP000198287    UP000015103    UP000002358    UP000261600    UP000008237    UP000265120    UP000261660    UP000246464    UP000005207    UP000261420    UP000261460    UP000261580    UP000265160    UP000261620    UP000245037    UP000019118    UP000030742    UP000007266    UP000010552    UP000233160    UP000094527    UP000007646    UP000248480    UP000002356    UP000189706    UP000005447   

PRIDE

Q5UAN6    Q8WQI5    O76756    I3KPR7   

Pfam

PF01201   Ribosomal_S8e

Interpro

IPR022309   Ribosomal_S8e/biogenesis_NSA2        + More
IPR001047   Ribosomal_S8e       
IPR018283   Ribosomal_S8e_CS       

ProteinModelPortal

Q5UAN6   D1LYM0   Q8WQI5   A0A2H1W6B1   A0A2A4K5A2   A0A0K8S974   + More
A0A3S2LB03   A0A1E1WMW1   A0A0L7LTY5   S4NX11   A0A0B5KT02   A0A3G1T1H4   Q6F475   A0A343EU18   G0ZEE3   E7DZ25   I4DLZ0   A0A194RJM3   I4DIG5   A0A212ENP2   A0A0J7KMH4   A0A348G686   E2AJ14   A0A0J7L1D8   F4WTB9   A0A158NMT5   A0A087ZV06   V9IK83   A0A151JMB6   A0A195EX66   A0A3L8D488   A0A2A3E770   A0A0C9PNX1   A0A195C6A1   O76756   A0A154PP56   A0A0L7R0G0   A0A0M9A0G1   A0A0U2V9I6   A0A3R7Q994   Q4GXT8   A0A1B6EX12   A0A1B6CEV8   I6P6T7   A0A1B6LQE3   A0A0U2TK61   A0A226EPG7   R4G5A0   A0A0N0BGE3   K7IWE3   A0A0N7Z9C6   A0A0U2T8R3   A0A411G842   A0A1Y1LHI4   K4GE94   R4WD83   Q6EUZ9   A0A0A9WSI1   A6YPI3   A0A161M8M3   A0A3Q3JWV9   A0A1D1XSX2   E2BN59   A0A3P8X2N2   A2Q0S3   C3KGU8   A0A1I9WLI8   A0A3Q3E161   A0A2U9BI76   I3KPR7   A0A3B4TUG4   A0A3B4F3G8   A0A3Q4HAS5   A0A3P9DEH9   G7MGN4   A0A3Q3E0B6   Q5DVI5   A0A3Q3XMY9   A0A2P8YRB7   J3JXL6   A0A0T6B5B3   D6WJB9   A2I496   A0A0U2V8D7   L5KPL3   A0A2K6EU01   A0A1D2N4V8   D1M805   K4G3H9   K4GKV3   V5GSZ3   K4GBK3   K4G564   G3UCL9   A0A2Y9DC71   K4GC33   W5NSP2   A0A1U7QH16   A0A250YC65   H0UUK1  

PDB

6IP8     E-value=4.2554e-81,     Score=764

KEGG

692717    K02995 small subunit ribosomal protein S8e | (RefSeq) RpS8; ribosomal protein S8

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0003735   GO:0006412   GO:0005840   GO:0022627   GO:0000462   GO:0005622   GO:0006260   GO:0008408   GO:0003677   GO:0016020   GO:0016876   GO:0043039  

PANTHER

PTHR10394  

Length:

208

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00112

Exp number, first 60 AAs:

0

Total prob of N-in:

0.37710

outside

1  -  208

 

 

Pi

229.307415

Theta

181.483803

Tajima's D

0.855277

CLR

0.214592

CSRT

0.620318984050797

Interpretation

Uncertain