SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09202  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003350
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.869
 

Sequence

CDS
ATGGAGTCGACGTGCTCGATGCCGACGGTCCGTTCCCGCAGCAGCGCGCCCCCCGCCCGCGCGCGCCGCGACCCGCCGCCCGAGAGCCGCGAGCCGGGCCCCGCCCCCGACCCGCAGGACCTCGGCCCGCCCGAGAACATTGTCGCCACGCTGCGTCTGCTCATCGCGCTCGAAGACTACCTCGGCAGCCTGGGGCCCCGCGTCATAGATCTACTTGCTGAAGCGTTAAAAATGGAAAAGGATAGGCCGAATTCATCGGAAGAGTTGTTAGACCGCGAGTCGGCTGTGGTGCTGCTGGAGACCGCGAAGGAGAAGCTGAAGGGCAGCGTGCAGGCCGGGCTCGTGGCGCCGGCCGCCGCGCCCGCCGCCCGCGCCGCGCTGCTGCGGGCCGCGCGCACGCTGCACGCCGCCGACACGCGCCAGCGCCGACAGCAGTGTCTGGTTATGGTCTCAAAATAA
Protein
MESTCSMPTVRSRSSAPPARARRDPPPESREPGPAPDPQDLGPPENIVATLRLLIALEDYLGSLGPRVIDLLAEALKMEKDRPNSSEELLDRESAVVLLETAKEKLKGSVQAGLVAPAAAPAARAALLRAARTLHAADTRQRRQQCLVMVSK

Summary

Uniprot
Interpro
IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
ProteinModelPortal

Ontologies

Topology

Length:
152
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.10238
Exp number, first 60 AAs:
0.00166
Total prob of N-in:
0.17673
outside
1  -  152
 
 

Population Genetic Test Statistics

Pi
319.282104
Theta
178.490865
Tajima's D
2.39538
CLR
0.012429
CSRT
0.933153342332883
Interpretation
Uncertain
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