Silkworm Genome Informatics Database

Gene

KWMTBOMO09201 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003350

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori]

Location

Bomo_Chr15(-):13166435-13169533 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.056

CDS

ATGATCGCGCAGGAAAAGAACAAGAGCACCCTCGCGGCGGGCGGCGCGGGGGGTGCGGGGGGTGCGGGCGCCGCGGTGCCGGTGGCGGGCGTGGGGCAGGTGGACCGCGCGCAGATCGCGGCCCAGCTCGCCGCCGCGCTCGTGGCGCAGGGCAAGACCGACGTCTCCGCCGACGAACTGTCGCAGCTCGTCGACGCCGTGGTGGGGATGGCCGAGGCCAAGCGCCGCGCCGCCGCCACTGCGGACAGCGACGCCGCCGCCGCTTCCACTTCCGCGTTGCAACTCTTGCAGTCGGCTTACGATGATAATGAAAAGAAATTGGAGAAAGAAGATCCGCCCGATGCAATGGACGGCTTGTCAGATTCCGACCTTGAAACTTTATTGAAAAACTTCAACGAATTATCTGTGGAGGAGCAGCACAGTTTGATCGCTTACCTGAAGAAATTAGAAGCGCGCGAGCCTCAACGTGTAGAGAGACTGCGGCAATACGTGAACGCACCCGTCGCTCTCTCGAACCAATTTACTACACCTGAAAACAACATCGTCGCCGTTGAAAGCGACGATGATGACTACACCGTAGACGAGGTATTTCAATCTGCAACGCAAAAAGTAAAAGAAGACCAGATGAGACAGGAGATGGAGATTGTGAAAAAATCGTTAGAAGAGACAAAGTCGATCCAAGACGACAAACAACAAGACGATCTACTTAAAAACTTAACGAGCAACCTGTCGTCCGCCGCCGGCCTGTTGGCACTAGTGCAGGCTTCTATACAGTCCACGTCAACTGTGACCGCTCCGCAGCCGACCTCAGATGTTGTCACCAGCAACATGCAACCTAAATCTTTCGGGGACCCTTCTGAAGCACCGTCGAAGCTCCTATTACCCTCCCAAACTCCTCAGAATAATAATCTAAATGAAAACTATAATCAAGTTGTTGATCCTCCGGTGTGGAATCAACAACATTCGAATATACCAAATAACAGAGAGGCGGAGCGAGGTGTCGCCCACGATTACTTCAATCAAGCCAATTATATCCAAAGTCATCAAGGACAGCAAGCAAATTTGAATGTTATTTATGAAAAAAATCAACATCAGCAGATGCATGGGGTTAACGCGAAAAAGTTCAGAGGCAGAGGAAGAGGTGGGGGTAGAGGAAAGTTTGGAGCACCTCGAGGACGAGGCCGTGGCCGAGGAGCACCCCATTAA

Protein

MIAQEKNKSTLAAGGAGGAGGAGAAVPVAGVGQVDRAQIAAQLAAALVAQGKTDVSADELSQLVDAVVGMAEAKRRAAATADSDAAAASTSALQLLQSAYDDNEKKLEKEDPPDAMDGLSDSDLETLLKNFNELSVEEQHSLIAYLKKLEAREPQRVERLRQYVNAPVALSNQFTTPENNIVAVESDDDDYTVDEVFQSATQKVKEDQMRQEMEIVKKSLEETKSIQDDKQQDDLLKNLTSNLSSAAGLLALVQASIQSTSTVTAPQPTSDVVTSNMQPKSFGDPSEAPSKLLLPSQTPQNNNLNENYNQVVDPPVWNQQHSNIPNNREAERGVAHDYFNQANYIQSHQGQQANLNVIYEKNQHQQMHGVNAKKFRGRGRGGGRGKFGAPRGRGRGRGAPH

Uniprot

H9J1G3 A0A3S2LRE9 A0A2A4K4B5 A0A2A4K611 A0A2H1V394 A0A194PJN9 + More

Pubmed

19121390 26354079

EMBL

BABH01023775 BABH01023776 BABH01023777 RSAL01000296 RVE42824.1 NWSH01000144 + More
PCG79101.1 PCG79100.1 ODYU01000468 SOQ35315.1 KQ459602 KPI93537.1

Proteomes

UP000005204 UP000283053 UP000218220 UP000053268

PRIDE

H9J1G3

Interpro

IPR036236 Znf_C2H2_sf + More
IPR013087 Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9J1G3 A0A3S2LRE9 A0A2A4K4B5 A0A2A4K611 A0A2H1V394 A0A194PJN9 + More

KEGG

101741942 no KO assigned | (RefSeq) uncharacterized protein CG7065-like

GO

GO:0003676

Length:

401

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.73951

Exp number, first 60 AAs:

10.72241

Total prob of N-in:

0.47162

POSSIBLE N-term signal

sequence

outside

1 - 401

Pi

155.435226

Theta

129.873345

Tajima's D

1.069658

CLR

0.195863

CSRT

0.683965801709915

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics