Gene

KWMTBOMO09195  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003395

Annotation

PREDICTED:_HBS1-like_protein_[Amyelois_transitella]

Location

Bomo_Chr15(+):12870756-12872958      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.642

CDS

ATGGCTCGACATCGTAACATTCGGAACAGAAGTTACTCTGATGACTATGATGACGATGATTTTTATGGACATTCAGTGGAAGAGGATAGTTGTTTATCTCCAAGTGATGCGTCGCAATGGATCTACGACCGATCACGAAACCAACAGGTGATATCTAACCTTCTCGATAGACACAGCAATATCCAGGAGGAAGCCGAAGATGAAGTTCAAGATGTTCAAGTACCGGGCCCACAACGAAGAGAGTCTACCGACCTCTGCAGCCTCAAGCTTGACGCGGAAGGTGAAACCAGGCTCATGTCTTGCTTAGATGAACTTCGGAATATTTTAGGTGATACAGTATCGGAAAATACAATGATTCAGAGTGTGCTTAAACATAATTTTGATTACAACAAAGCTTTAGACGATATACTTAATAGTGATAAGAGTAAAAATAAAGATTCATCCACATCTAAACCAGTTAAGCCTGTTATTACTAATACAGTGAAAACCACAACAGCATTAGTAGCTCCTAAAGTTATAGCTACAAGTGTAGATCAGAAGAGTGCTGTAATCAAGGGTTTTAAAGTGGACCAAGAGCCAAAGCCTAATAGTCGCCCTCAGACACCTAGAGGGCAGTCTCCTCACCCAGAAAAAAGCAAGACTGAACAAAATGATGACATGAAAAATTTAAAAGTAAAAGAGAACAAAATTGATGCAAAAAAACAATATGCCAATGAGAGAGGTTCTGACAAAGATCATTTGTACATTGTCGTGATAGGTCATGTTGATGCAGGAAAATCTACATTAATGGGCAGATTATTATGTGAGCTCGGAGAAGTCAGTCAAAAAACTTTGCACAAATATGAACAGGAGAGTAAAAAGATTGGAAAGCAAAGCTTTATGTATGCCTGGGTGCTTGATGAAACAGGAGAGGAAAGAGTCCGAGGAATCACTATGGATATTGGGCGTGCCCAGATTGAAACAAAGACAAAGAGGGTTATAATATTAGATGCACCGGGGCATGCTGATTTTATCCCTAATATGATAACTGGTGCTGGTCAAGCTGATGTTGCTATGTTGGTAGTTGATGCAACTAGGGGAGAGTTTGAATCCGGATTTGATTTCGGTGGTCAAACAAGAGAACATGCATTACTAGTGAGGTCACTTGGTGTAAGTCAGCTGGCTGTTGCCATTAACAAACTGGATACAGCCAACTGGTCTCAAGACAGATTTAATGAAATCACCAATAAACTTAAGGTTTTTTTGAAACAAGCAGGATTCAAAGATACAGATGTCACCTATGTGCCTTGTTCAGGACTCATTGGTGAGAATCTTGTGAAACCAGCAAGCGAACCTGAATTAACTAAATGGTACAAAGGACCCTGTCTTTTAGATGTGATTGACAAATTCAATGTTCCAGAGAGGCCTGTGTCTAAGCCATTACGTATTTCAATCAATGATGTGTTCAAAGGTACCGGTTCTGGATTTTGTGTTTCGGGACGCATTGAAAACGGAGTTCTAAAGAAGGGCGATAAAGTATTGGTTTGTCCAACAAAAGAAATGGCTGAAGTTAGAAGTTTAAGTATAAATGATCTTACTAATAATGTAGCATTTGCTGGAGACCAAGTCACATTGACTTTGTCTGGGGTGGACATGCAGAATGTGTCAGTTGGATACATACTCAGCGATCCTATTGAGCAGGTTTCTGTTACAACACGTTTCGAGGCCCGAATAGTAGTTTTCAATGTTAAAGTACCAATAACAAAAGGCTTTCCGGTGCTTGTTCACTATCAATCATTGGTAGAATCTGCTAATATTGTCAAGCTTAAGGCATTACTCAGCAAAAGTACCGGTGAGCTAATTAAAAAGAAACCTCGTTGCTTAGGAAATAATTCTGTGGCAGTTGTTGAAATTGAGACCAGCAGGCCCATATGCATCGAGAGATATAAAGATGTTAAGGAGCTTGGTCGTGTTATGTTACGCGTCGCAGGTGTCACCATAGCAGCAGGCCTTGTCACTGATATTATCAGCACATGA

Protein

MARHRNIRNRSYSDDYDDDDFYGHSVEEDSCLSPSDASQWIYDRSRNQQVISNLLDRHSNIQEEAEDEVQDVQVPGPQRRESTDLCSLKLDAEGETRLMSCLDELRNILGDTVSENTMIQSVLKHNFDYNKALDDILNSDKSKNKDSSTSKPVKPVITNTVKTTTALVAPKVIATSVDQKSAVIKGFKVDQEPKPNSRPQTPRGQSPHPEKSKTEQNDDMKNLKVKENKIDAKKQYANERGSDKDHLYIVVIGHVDAGKSTLMGRLLCELGEVSQKTLHKYEQESKKIGKQSFMYAWVLDETGEERVRGITMDIGRAQIETKTKRVIILDAPGHADFIPNMITGAGQADVAMLVVDATRGEFESGFDFGGQTREHALLVRSLGVSQLAVAINKLDTANWSQDRFNEITNKLKVFLKQAGFKDTDVTYVPCSGLIGENLVKPASEPELTKWYKGPCLLDVIDKFNVPERPVSKPLRISINDVFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVTLTLSGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVESANIVKLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRVAGVTIAAGLVTDIIST

Similarity

Belongs to the membrane-bound acyltransferase family.

Uniprot

H9J1K8   A0A2A4J6I5   A0A2H1V2E0   A0A3S2L0K0   A0A212EZV2   A0A0L7KNV7   + More
A0A194R7I7   A0A194PKK1   U5EWS8   A0A067R832   B3NEW9   Q17N55   A0A1L8DRS6   Q9W074   A0A1L8DRX2   B4PDV6   B4HW19   Q86NR4   A0A182XU64   B4QMZ7   A0A182LEL4   Q7PQZ5   A0A1W4VVC6   A0A1Y1M780   A0A182QBA3   A0A1Q3F5M6   A0A182VC64   A0A084WTT1   A0A182RLE3   A0A182PCC9   B0X1I9   B5DPP1   A0A182THC7   B4GS29   A0A182MJW8   A0A2M4BFK3   B3M790   A0A2M4BFK0   B4LDE7   A0A182JG83   W5JR42   W8BZR4   A0A3B0JV05   A0A1B6FHJ0   A0A2M4A8K3   A0A1I8NUV9   A0A1I8NIN1   A0A2M4A8E9   A0A1B6IM34   A0A1B0BZU5   T1PBU2   A0A0L0BX67   D6WFW5   A0A1A9XT30   A0A1B0FBA1   B4L9N9   B4IZY0   A0A1A9VAP8   A0A1A9W551   A0A1B0AIF4   A0A0A1XE73   A0A182NRH2   A0A1W4WNJ6   A0A2J7QWW1   A0A2J7QWX0   A0A0R3P7W8   T1GV40   A0A0M4EXU0   A0A182GXL0   A0A1B6DUA2   A0A1B6DFH3   A0A224XJI2   A0A069DZF2   A0A2M3Z0M3   A0A2M3Z0R7   A0A146LZA2   A0A2M4AAY5   N6UGR3   A0A336MLD5   A0A0J7NHF9   U4U3X9   A0A3L8DAQ9   A0A182HSK0   K7IW77   A0A0K8UJH3   A0A034W244   A0A0V0G675   A0A034W684   A0A182Y6J1   E9J3H7   A0A023FM87   G3ML25   A0A224YY10   A0A131YIU4  

Pubmed

19121390    22118469    26227816    26354079    24845553    17994087    + More
17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    20966253    12364791    14747013    17210077    28004739    24438588    15632085    20920257    23761445    24495485    25315136    26108605    18362917    19820115    25830018    26483478    26334808    26823975    23537049    30249741    20075255    25348373    25244985    21282665    22216098    28797301    26830274   

EMBL

BABH01023748    NWSH01003059    PCG67032.1    ODYU01000358    SOQ35001.1    RSAL01000296    + More
RVE42819.1    AGBW02011215    OWR47036.1    JTDY01007705    KOB64998.1    KQ460615    KPJ13793.1    KQ459602    KPI93533.1    GANO01000420    JAB59451.1    KK852680    KDR18612.1    CH954178    EDV50242.1    CH477202    EAT48087.1    GFDF01004896    JAV09188.1    AE014296    BT120040    AAF47584.2    ADA53579.1    AHN57931.1    GFDF01004895    JAV09189.1    CM000159    EDW92921.1    CH480817    EDW50134.1    BT003766    AAO41445.1    CM000363    CM002912    EDX08879.1    KMY96968.1    AAAB01008859    EAA08085.4    GEZM01041791    GEZM01041788    JAV80155.1    AXCN02001460    GFDL01012189    JAV22856.1    ATLV01026914    KE525420    KFB53625.1    DS232260    EDS38638.1    CH379069    EDY73563.1    CH479188    EDW40564.1    AXCM01000145    GGFJ01002688    MBW51829.1    CH902618    EDV38751.1    GGFJ01002689    MBW51830.1    CH940647    EDW68885.1    ADMH02000418    ETN66591.1    GAMC01004347    JAC02209.1    OUUW01000009    SPP84893.1    GECZ01020100    JAS49669.1    GGFK01003739    MBW37060.1    GGFK01003755    MBW37076.1    GECU01019709    JAS87997.1    JXJN01023294    KA646149    AFP60778.1    JRES01001202    JRES01000681    KNC24642.1    KNC29223.1    KQ971328    EFA00945.2    CCAG010014905    CH933816    EDW17087.1    CH916366    EDV96752.1    GBXI01004573    JAD09719.1    NEVH01009418    PNF33078.1    PNF33079.1    KRT07853.1    CAQQ02160082    CP012525    ALC42870.1    JXUM01095598    KQ564206    KXJ72584.1    GEDC01008073    JAS29225.1    GEDC01012908    JAS24390.1    GFTR01007674    JAW08752.1    GBGD01000745    JAC88144.1    GGFM01001331    MBW22082.1    GGFM01001376    MBW22127.1    GDHC01006364    JAQ12265.1    GGFK01004551    MBW37872.1    APGK01026522    APGK01026523    KB740635    ENN79831.1    UFQT01001589    SSX31076.1    LBMM01004967    KMQ91950.1    KB631992    ERL87762.1    QOIP01000010    RLU17426.1    APCN01000281    GDHF01025472    JAI26842.1    GAKP01009301    JAC49651.1    GECL01003218    JAP02906.1    GAKP01009302    JAC49650.1    GL768066    EFZ12576.1    GBBK01002143    JAC22339.1    JO842576    AEO34193.1    GFPF01007556    MAA18702.1    GEDV01009680    JAP78877.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000037510    UP000053240    + More
UP000053268    UP000027135    UP000008711    UP000008820    UP000000803    UP000002282    UP000001292    UP000076407    UP000000304    UP000075882    UP000007062    UP000192221    UP000075886    UP000075903    UP000030765    UP000075900    UP000075885    UP000002320    UP000001819    UP000075902    UP000008744    UP000075883    UP000007801    UP000008792    UP000075880    UP000000673    UP000268350    UP000095300    UP000095301    UP000092460    UP000037069    UP000007266    UP000092443    UP000092444    UP000009192    UP000001070    UP000078200    UP000091820    UP000092445    UP000075884    UP000192223    UP000235965    UP000015102    UP000092553    UP000069940    UP000249989    UP000019118    UP000036403    UP000030742    UP000279307    UP000075840    UP000002358    UP000076408   

PRIDE

H9J1K8    Q9W074    Q86NR4   

Pfam

PF03143   GTP_EFTU_D3        + More
PF08938   HBS1_N
PF03144   GTP_EFTU_D2
PF00009   GTP_EFTU
PF03062   MBOAT
PF00071   Ras

Interpro

IPR027417   P-loop_NTPase        + More
IPR000795   TF_GTP-bd_dom       
IPR004160   Transl_elong_EFTu/EF1A_C       
IPR009001   Transl_elong_EF1A/Init_IF2_C       
IPR015033   HBS1-like_N       
IPR037189   HBS1-like_N_sf       
IPR004161   EFTu-like_2       
IPR009000   Transl_B-barrel_sf       
IPR004299   MBOAT_fam       
IPR005225   Small_GTP-bd_dom       
IPR020849   Small_GTPase_Ras-type       
IPR038851   Rap1       
IPR001806   Small_GTPase       

SUPFAM

SSF52540   SSF52540        + More
SSF109732   SSF109732       
SSF50465   SSF50465       
SSF50447   SSF50447       

CDD

cd04175  Rap1

ProteinModelPortal

H9J1K8   A0A2A4J6I5   A0A2H1V2E0   A0A3S2L0K0   A0A212EZV2   A0A0L7KNV7   + More
A0A194R7I7   A0A194PKK1   U5EWS8   A0A067R832   B3NEW9   Q17N55   A0A1L8DRS6   Q9W074   A0A1L8DRX2   B4PDV6   B4HW19   Q86NR4   A0A182XU64   B4QMZ7   A0A182LEL4   Q7PQZ5   A0A1W4VVC6   A0A1Y1M780   A0A182QBA3   A0A1Q3F5M6   A0A182VC64   A0A084WTT1   A0A182RLE3   A0A182PCC9   B0X1I9   B5DPP1   A0A182THC7   B4GS29   A0A182MJW8   A0A2M4BFK3   B3M790   A0A2M4BFK0   B4LDE7   A0A182JG83   W5JR42   W8BZR4   A0A3B0JV05   A0A1B6FHJ0   A0A2M4A8K3   A0A1I8NUV9   A0A1I8NIN1   A0A2M4A8E9   A0A1B6IM34   A0A1B0BZU5   T1PBU2   A0A0L0BX67   D6WFW5   A0A1A9XT30   A0A1B0FBA1   B4L9N9   B4IZY0   A0A1A9VAP8   A0A1A9W551   A0A1B0AIF4   A0A0A1XE73   A0A182NRH2   A0A1W4WNJ6   A0A2J7QWW1   A0A2J7QWX0   A0A0R3P7W8   T1GV40   A0A0M4EXU0   A0A182GXL0   A0A1B6DUA2   A0A1B6DFH3   A0A224XJI2   A0A069DZF2   A0A2M3Z0M3   A0A2M3Z0R7   A0A146LZA2   A0A2M4AAY5   N6UGR3   A0A336MLD5   A0A0J7NHF9   U4U3X9   A0A3L8DAQ9   A0A182HSK0   K7IW77   A0A0K8UJH3   A0A034W244   A0A0V0G675   A0A034W684   A0A182Y6J1   E9J3H7   A0A023FM87   G3ML25   A0A224YY10   A0A131YIU4  

PDB

5LZZ     E-value=5.62674e-171,     Score=1545

KEGG

101742768    K14416 elongation factor 1 alpha-like protein | (RefSeq) HBS1-like protein

PATHWAY

03015    mRNA surveillance pathway - Bombyx mori (domestic silkworm)

GO

GO:0005525   GO:0003924   GO:0003746   GO:0016441   GO:0045089   GO:0050829   GO:0006412   GO:0016021   GO:0016020   GO:0032486   GO:0006468   GO:0005524   GO:0005739   GO:0016776   GO:0006811   GO:0016876   GO:0043039  

Length:

671

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.80048

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02780

outside

1  -  671

 

 

Pi

166.46575

Theta

183.5036

Tajima's D

-1.076276

CLR

17.945606

CSRT

0.124443777811109

Interpretation

Uncertain