Gene

KWMTBOMO09194  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003355

Annotation

PREDICTED:_ras-related_GTP-binding_protein_A_[Papilio_polytes]

Location

Bomo_Chr15(-):12860421-12868555      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.441 Nuclear   Reliability : 1.294

CDS

ATGAAGAAAAAGGTACTATTAATGGGAAAAAGTGGTTCTGGTAAAACCAGTATGAGGTCTATCATATTCGCCAATTATATAGCAAGGGATACAAGACGCCTCGGAGCAACAATTGACGTTGAACATTCACATGTCCGTTTCCTCGGTAATTTGGTTCTCAACTTATGGGATTGTGGTGGTCAGGAAGCTTTCATGGAAAACTATTTTGCATCACAAAGAGACAATATATTCAGGAACGTTGAAGTTCTGATATATGTTTTTGATGTAGAAAGTCGTGAAATGGAAAAAGATATGCATTACTACCAGTCATGTCTTGAGGCGATTTTACAGAACTCTCCAGAAGCCAGGATATTCTGTTTAGTACACAAAATGGACTTAGTGGCAGAAGAACAAAGAGAAGAAATATTCAGAGCAAGGGAAGAAGATTTAAAAGGGCTTTCCAAACCATTAGAATGCACTTGCTTTAGGACCAGTATCTGGGATGAGACATTGTATAAGGCGTGGTCTAGTATAGTATACAAATTAATACCTAATGTCAAAGCATTGGAGTCGTCATTGAAACAATTCGCCGCGATCGTTGATGCAGATGAGGTATTGTTATTCGAGCGAGCAACATTCTTGGTCGTGTCGCACTGCCAACGCCGGCAACATCGGGACGCGCATCGCTTCGAGAAAGTCTCGAATATCGTGAAACAGTTCAAACTGTCTTGTTCGAAGCTTGCTGCGCAGTTTCAGAGCATGGAGGTACGCAACAGCGTGTTCGCAGCTTTCATTGACGGATTCACGAGCAACACTTATGTCATGGTCGAGATGTCCGATCCGAAGATACCTTCGGAAGCGACCCTCATCAACATCAGGAACGCGCGCAAGCATTTCGAGAAACTAGAGAAGGTCTCGTCTTCCGCTCCCAGTCAGTACCAGTGA

Protein

MKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLVAEEQREEIFRAREEDLKGLSKPLECTCFRTSIWDETLYKAWSSIVYKLIPNVKALESSLKQFAAIVDADEVLLFERATFLVVSHCQRRQHRDAHRFEKVSNIVKQFKLSCSKLAAQFQSMEVRNSVFAAFIDGFTSNTYVMVEMSDPKIPSEATLINIRNARKHFEKLEKVSSSAPSQYQ

Uniprot

H9J1G8   A0A3S2NLG0   A0A2H1V3R7   A0A2A4J6F9   A0A194PJN0   A0A2A4J569   + More
A0A1Y1LTZ3   A0A1W4W5M8   D6WMU5   A0A088ABK1   A0A158NVM8   E2ANR0   J3JUA7   A0A026W5R8   K7IWK9   A0A0M3TCI0   A0A1B6C6S4   N6U9F0   A0A1Q3G206   A0A2A3E737   A0A1S4EY15   Q17LZ4   A0A1B6IHT9   A0A154P1J4   A0A336LU21   A0A336LUD6   U5EJ81   A0A182Y482   C3ZF20   A0A182W036   A0A182VP57   A0A182LFX2   A0A182PKN4   E9G9U2   A0A182WRM6   A0A182RNU1   A0A182HU52   Q7QD78   A0A182J4M6   A0A182M5J1   A0A0L7QZE7   A0A182N667   A0A2M4AMV0   A0A182K503   A0A0P6FRW9   A0A084VC31   A0A1E1XCN8   A0A2M4BQS8   W5JK88   A0A2B4SHV5   A0A2M3ZJ39   A0A1I8JSS9   A0A1S3ISU5   A0A0P6B7P0   A0A1L8DLM1   A0A1B0CXC8   W5NCT3   A0A023FKH2   A0A1W4YVU9   A0A023GI55   G3MLV7   H3D2N1   Q4S8S2   A0A3B1JL91   H2UE88   V9KLY2   A0A224YUA9   A0A131YKQ6   L7M5M7   A0A131XDM7   A0A3B4XTC1   A0A3Q2EI35   A0A3B3YDR9   A0A3Q1EZA4   A0A3B4ZXX2   A0A3Q2YPT9   A0A2I4B3A7   A0A0S7IQE9   A0A0F8CGV3   M4ACD6   A0A3Q3LU38   A0A3Q1IC22   C3KIL3   A0A3Q1AUL7   A0A3Q0SAI4   A0A3B4UNM7   A0A3Q2ZUX4   A0A3Q3R9V7   A0A3B3TU78   A0A3P9QBP7   A0A3Q3EED5   H2LZR3   V9KHC4   A0A3P8SAS4   A0A2U9B922   W5UGY2   A0A3P9IXR0   A0A147A8M3   A0A3B3QFS8   A0A087YNH2  

Pubmed

19121390    26354079    28004739    18362917    19820115    21347285    + More
20798317    22516182    24508170    20075255    23537049    17510324    25244985    18563158    20966253    21292972    12364791    14747013    17210077    24438588    28503490    20920257    23761445    22216098    15496914    25329095    21551351    24402279    28797301    26830274    25576852    28049606    25835551    23542700    17554307    23127152    29240929   

EMBL

BABH01023748    RSAL01000296    RVE42818.1    ODYU01000358    SOQ35002.1    NWSH01003059    + More
PCG67030.1    KQ459602    KPI93532.1    PCG67029.1    GEZM01049911    JAV75760.1    KQ971342    EFA03068.1    ADTU01027288    GL441305    EFN64928.1    BT126820    AEE61782.1    KK107429    EZA50956.1    KR075858    ALE20577.1    GEDC01028097    JAS09201.1    APGK01043868    KB741018    KB632152    ENN75222.1    ERL89147.1    GFDL01001266    JAV33779.1    KZ288347    PBC27528.1    CH477209    EAT47750.1    GECU01021220    JAS86486.1    KQ434786    KZC05214.1    UFQT01000197    SSX21546.1    SSX21545.1    GANO01002334    JAB57537.1    GG666612    EEN49326.1    GL732536    EFX83628.1    APCN01000606    AAAB01008859    EAA08106.4    AXCM01001075    KQ414681    KOC63931.1    GGFK01008792    MBW42113.1    GDIP01144157    GDIQ01055117    LRGB01000474    JAJ79245.1    JAN39620.1    KZS18982.1    ATLV01010055    KE524563    KFB35525.1    GFAC01002168    JAT97020.1    GGFJ01006231    MBW55372.1    ADMH02001204    ETN63728.1    LSMT01000073    PFX28966.1    GGFM01007707    MBW28458.1    GDIP01032905    JAM70810.1    GFDF01006817    JAV07267.1    AJWK01033560    AHAT01016881    AHAT01016882    GBBK01003022    JAC21460.1    GBBM01001791    JAC33627.1    JO842858    AEO34475.1    CAAE01014703    CAG02960.1    JW866563    AFO99080.1    GFPF01008183    MAA19329.1    GEDV01008674    JAP79883.1    GACK01005453    JAA59581.1    GEFH01003482    JAP65099.1    GBYX01425979    JAO55276.1    KQ040942    KKF32788.1    BT082778    ACQ58485.1    JW865229    AFO97746.1    CP026246    AWP00281.1    AWP00282.1    JT410100    AHH38932.1    GCES01011751    JAR74572.1    AYCK01002043   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000192223    UP000007266    + More
UP000005203    UP000005205    UP000000311    UP000053097    UP000002358    UP000019118    UP000030742    UP000242457    UP000008820    UP000076502    UP000076408    UP000001554    UP000075920    UP000075903    UP000075882    UP000075885    UP000000305    UP000076407    UP000075900    UP000075840    UP000007062    UP000075880    UP000075883    UP000053825    UP000075884    UP000075881    UP000076858    UP000030765    UP000000673    UP000225706    UP000069272    UP000085678    UP000092461    UP000018468    UP000192224    UP000007303    UP000018467    UP000005226    UP000261360    UP000265020    UP000261480    UP000257200    UP000261400    UP000264820    UP000192220    UP000002852    UP000261640    UP000265040    UP000257160    UP000261340    UP000261420    UP000264800    UP000261600    UP000261500    UP000242638    UP000261660    UP000001038    UP000265080    UP000246464    UP000221080    UP000265180    UP000265200    UP000261540    UP000028760   

PRIDE

H9J1G8   

Pfam

PF04670   Gtr1_RagA

Interpro

IPR006762   Gtr1_RagA        + More
IPR039397   RagA/B       
IPR027417   P-loop_NTPase       

SUPFAM

SSF52540   SSF52540       

CDD

cd11384  RagA_like

ProteinModelPortal

H9J1G8   A0A3S2NLG0   A0A2H1V3R7   A0A2A4J6F9   A0A194PJN0   A0A2A4J569   + More
A0A1Y1LTZ3   A0A1W4W5M8   D6WMU5   A0A088ABK1   A0A158NVM8   E2ANR0   J3JUA7   A0A026W5R8   K7IWK9   A0A0M3TCI0   A0A1B6C6S4   N6U9F0   A0A1Q3G206   A0A2A3E737   A0A1S4EY15   Q17LZ4   A0A1B6IHT9   A0A154P1J4   A0A336LU21   A0A336LUD6   U5EJ81   A0A182Y482   C3ZF20   A0A182W036   A0A182VP57   A0A182LFX2   A0A182PKN4   E9G9U2   A0A182WRM6   A0A182RNU1   A0A182HU52   Q7QD78   A0A182J4M6   A0A182M5J1   A0A0L7QZE7   A0A182N667   A0A2M4AMV0   A0A182K503   A0A0P6FRW9   A0A084VC31   A0A1E1XCN8   A0A2M4BQS8   W5JK88   A0A2B4SHV5   A0A2M3ZJ39   A0A1I8JSS9   A0A1S3ISU5   A0A0P6B7P0   A0A1L8DLM1   A0A1B0CXC8   W5NCT3   A0A023FKH2   A0A1W4YVU9   A0A023GI55   G3MLV7   H3D2N1   Q4S8S2   A0A3B1JL91   H2UE88   V9KLY2   A0A224YUA9   A0A131YKQ6   L7M5M7   A0A131XDM7   A0A3B4XTC1   A0A3Q2EI35   A0A3B3YDR9   A0A3Q1EZA4   A0A3B4ZXX2   A0A3Q2YPT9   A0A2I4B3A7   A0A0S7IQE9   A0A0F8CGV3   M4ACD6   A0A3Q3LU38   A0A3Q1IC22   C3KIL3   A0A3Q1AUL7   A0A3Q0SAI4   A0A3B4UNM7   A0A3Q2ZUX4   A0A3Q3R9V7   A0A3B3TU78   A0A3P9QBP7   A0A3Q3EED5   H2LZR3   V9KHC4   A0A3P8SAS4   A0A2U9B922   W5UGY2   A0A3P9IXR0   A0A147A8M3   A0A3B3QFS8   A0A087YNH2  

PDB

6CES     E-value=4.55589e-147,     Score=1335

KEGG

101742921    K16185 Ras-related GTP-binding protein A/B | (RefSeq) ras-related GTP-binding protein A

PATHWAY

04140    Autophagy - animal - Bombyx mori (domestic silkworm)
04150    mTOR signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0005525   GO:0071230   GO:0009267   GO:0032008   GO:0005764   GO:0034448   GO:0010506   GO:0003924   GO:0005634   GO:1990131   GO:2000425   GO:0022010   GO:1905671   GO:0008270   GO:0006468   GO:0005524   GO:0005739   GO:0016776   GO:0006811   GO:0016020   GO:0016876   GO:0043039  

PANTHER

PTHR11259  

Length:

307

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04151

Exp number, first 60 AAs:

0.00379

Total prob of N-in:

0.04073

outside

1  -  307

 

 

Pi

203.541722

Theta

167.334932

Tajima's D

0.791468

CLR

0

CSRT

0.59962001899905

Interpretation

Uncertain