Gene

KWMTBOMO09190  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003358

Annotation

PREDICTED:_HIG1_domain_family_member_1A?_mitochondrial-like_[Amyelois_transitella]

Location

Bomo_Chr15(-):12843972-12845445      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.342 Nuclear   Reliability : 1.004

CDS

ATGACTAACAGCCAACAAATATTTGAATACAATGAAGAATCACAATCTGAAAGACTTGCCAGGAAGTCAAAAGATTCACCATTTATGATAATTGGGCTCCTTGGATTAGTAGGTGTTTGTGGCTATGGTGCATACAGTTACAAGAAGAGAGGAAAAATGAGCACTAGTGTATTCCTAATGCAGCTCCGAGTTGCTGCCCAAGGCACTGTAGTGTCAGCTCTTACAATCGGGCTGGCATACACATTAGCAAAGGAACACCTCTTTAAAGATTCTAAGAAAGAATAA

Protein

MTNSQQIFEYNEESQSERLARKSKDSPFMIIGLLGLVGVCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVVSALTIGLAYTLAKEHLFKDSKKE

Uniprot

H9J1H1   A0A3S2N6M0   A0A2H1V2K9   A0A2A4J6H5   I4DK40   A0A194R7I3   + More
S4NSW2   A0A1L8E0J0   H9J1G9   A0A1B0DQY2   A0A0L7KNI9   A0A1B0CJ30   A0A0K8TRA6   B4NKV9   A0A084WNK2   U5EHM4   A0A023ECJ9   A0A336L9C0   B0XDC9   A0A2H1V2D6   Q16XY6   T1E2F2   Q16XY7   W8BMG1   A0A1Y1MKT1   A0A023EFU6   A0A182N2N3   A0A194RD06   A0A194PJD0   A0A1Q3FIB5   A0A182TEC5   A0A182WXW7   Q7QE07   A0A182I5Y8   A0A182FVG1   A0A2M4AGW9   T1DQL4   W5JI78   A0A182WE50   A0A182Y9M2   A0A2M4C584   A0A2M4C429   A0A182VHQ2   A0A182ISZ0   Q293S5   B4GLP6   A0A336MUQ4   A0A1W4V5A7   A0A182PM22   A0A182K180   A0A3B0JNX6   A0A0A1WG42   R4UKW7   A0A2M3ZKK1   Q9VGQ2   A0A0K8UPN9   A0A034WJ12   A0A0C9QUI6   Q8INK7   B4QID4   B3NZG3   A0A2M4B0D7   B4HMP5   A0A2A4J5S6   A0A0P9AQR0   B3LXD6   Q8SXE6   A0A1E1WDW2   A0A0Q9XA11   B4K9U8   R4WNN7   B5RIK2   A0A0Q9XD25   B4QU55   A0A1W4WUF7   A0A1W4WU50   A0A1W4WT46   A0A0J9R9N6   B4PM41   D6WIG9   A0A1E1WM56   A0A067QPA3   N6TG59   A0A212F015   Q7JW46   B4HIB1   A0A0M4EEG2   A0A0Q9WFS3   B4LXM6   A0A1J1J4G3   T1I5P0   A0A0B4KEI1   A0A1W4VQ53   A0A023FCS0   A0A0V0GBZ0   A0A0R1DMZ5   A0A1B0G4T7   A0A2P8Z1R7   A0A240SX62   A0A1B0AZE3  

Pubmed

19121390    22651552    26354079    23622113    26227816    26369729    + More
17994087    24438588    24945155    26483478    17510324    24330624    24495485    28004739    12364791    14747013    17210077    20920257    23761445    25244985    15632085    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    23691247    22936249    17550304    18362917    19820115    24845553    23537049    22118469    25474469    29403074   

EMBL

BABH01023748    RSAL01000296    RVE42815.1    ODYU01000358    SOQ35006.1    NWSH01003059    + More
PCG67023.1    AK401658    KQ459602    BAM18280.1    KPI93528.1    KQ460615    KPJ13788.1    GAIX01013882    JAA78678.1    GFDF01002069    JAV12015.1    AJVK01019452    JTDY01007915    KOB64857.1    AJWK01013987    AJWK01013988    GDAI01001148    JAI16455.1    CH964272    EDW84162.1    ATLV01024619    KE525353    KFB51796.1    GANO01002954    JAB56917.1    JXUM01034371    GAPW01006530    KQ561021    JAC07068.1    KXJ79999.1    UFQS01002436    UFQT01002436    SSX14029.1    SSX33448.1    DS232752    EDS45407.1    SOQ35003.1    CH477530    EAT39456.1    GALA01001300    JAA93552.1    EAT39457.1    GAMC01008388    GAMC01008387    JAB98168.1    GEZM01031222    JAV84965.1    GAPW01005898    JAC07700.1    KPJ13791.1    KPI93531.1    GFDL01007802    JAV27243.1    AAAB01008848    EAA07070.3    APCN01003537    GGFK01006641    MBW39962.1    GAMD01001095    JAB00496.1    ADMH02001177    ETN63831.1    GGFJ01011170    MBW60311.1    GGFJ01010903    MBW60044.1    CM000070    EAL29139.2    CH479185    EDW38470.1    SSX14026.1    SSX33445.1    OUUW01000008    SPP83825.1    GBXI01016475    JAC97816.1    KC740955    AGM32779.1    GGFM01008310    MBW29061.1    AE014297    AY070609    AAF54624.1    AAL48080.1    GDHF01023667    JAI28647.1    GAKP01004625    JAC54327.1    GBYB01004297    JAG74064.1    KX531469    AAN13498.1    ANY27279.1    CM000362    EDX06494.1    CH954181    EDV49536.1    GGFK01013169    MBW46490.1    CH480816    EDW47257.1    PCG67028.1    CH902617    KPU79902.1    EDV42780.1    AY089682    AAL90420.1    GDQN01006003    JAT85051.1    CH933806    KRG01634.1    EDW15596.1    AK417271    BAN20486.1    BT044126    ACH92191.1    KRG01635.1    CM000364    EDX13386.1    CM002911    KMY92783.1    CM000160    EDW96907.1    KQ971334    EFA01076.1    GDQN01003047    JAT88007.1    KK853110    KDR11232.1    APGK01002433    APGK01004119    APGK01039325    KB740969    KB735583    KB734777    KB632230    ENN76753.1    ENN83343.1    ENN83504.1    ERL90393.1    AGBW02011215    OWR47034.1    AE013599    AY118378    AAF58798.1    AAM48407.1    CH480815    EDW42626.1    CP012526    ALC46378.1    CH940650    KRF82934.1    EDW66810.1    CVRI01000067    CRL06692.1    ACPB03003574    AGB93398.1    GBBI01000263    JAC18449.1    GECL01000767    JAP05357.1    CM000157    KRJ98644.1    KRJ98645.1    CCAG010006284    PYGN01000238    PSN50447.1    JXJN01006255   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000092462    + More
UP000037510    UP000092461    UP000007798    UP000030765    UP000069940    UP000249989    UP000002320    UP000008820    UP000075884    UP000075902    UP000076407    UP000007062    UP000075840    UP000069272    UP000000673    UP000075920    UP000076408    UP000075903    UP000075880    UP000001819    UP000008744    UP000192221    UP000075885    UP000075881    UP000268350    UP000000803    UP000000304    UP000008711    UP000001292    UP000007801    UP000009192    UP000192223    UP000002282    UP000007266    UP000027135    UP000019118    UP000030742    UP000007151    UP000092553    UP000008792    UP000183832    UP000015103    UP000092444    UP000245037    UP000092445    UP000092460   

PRIDE

H9J1H1    H9J1G9    Q9VGQ2    Q8INK7    Q8SXE6    B5RIK2    + More
Q7JW46   

Pfam

PF04588   HIG_1_N

Interpro

IPR007667   Hypoxia_induced_domain       

ProteinModelPortal

H9J1H1   A0A3S2N6M0   A0A2H1V2K9   A0A2A4J6H5   I4DK40   A0A194R7I3   + More
S4NSW2   A0A1L8E0J0   H9J1G9   A0A1B0DQY2   A0A0L7KNI9   A0A1B0CJ30   A0A0K8TRA6   B4NKV9   A0A084WNK2   U5EHM4   A0A023ECJ9   A0A336L9C0   B0XDC9   A0A2H1V2D6   Q16XY6   T1E2F2   Q16XY7   W8BMG1   A0A1Y1MKT1   A0A023EFU6   A0A182N2N3   A0A194RD06   A0A194PJD0   A0A1Q3FIB5   A0A182TEC5   A0A182WXW7   Q7QE07   A0A182I5Y8   A0A182FVG1   A0A2M4AGW9   T1DQL4   W5JI78   A0A182WE50   A0A182Y9M2   A0A2M4C584   A0A2M4C429   A0A182VHQ2   A0A182ISZ0   Q293S5   B4GLP6   A0A336MUQ4   A0A1W4V5A7   A0A182PM22   A0A182K180   A0A3B0JNX6   A0A0A1WG42   R4UKW7   A0A2M3ZKK1   Q9VGQ2   A0A0K8UPN9   A0A034WJ12   A0A0C9QUI6   Q8INK7   B4QID4   B3NZG3   A0A2M4B0D7   B4HMP5   A0A2A4J5S6   A0A0P9AQR0   B3LXD6   Q8SXE6   A0A1E1WDW2   A0A0Q9XA11   B4K9U8   R4WNN7   B5RIK2   A0A0Q9XD25   B4QU55   A0A1W4WUF7   A0A1W4WU50   A0A1W4WT46   A0A0J9R9N6   B4PM41   D6WIG9   A0A1E1WM56   A0A067QPA3   N6TG59   A0A212F015   Q7JW46   B4HIB1   A0A0M4EEG2   A0A0Q9WFS3   B4LXM6   A0A1J1J4G3   T1I5P0   A0A0B4KEI1   A0A1W4VQ53   A0A023FCS0   A0A0V0GBZ0   A0A0R1DMZ5   A0A1B0G4T7   A0A2P8Z1R7   A0A240SX62   A0A1B0AZE3  

PDB

2LOM     E-value=9.7669e-11,     Score=154

KEGG

101741702    no KO assigned | (RefSeq) HIG1 domain family member 1A, mitochondrial

GO

GO:0016021   GO:0048149   GO:0055070  

Length:

94

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

40.06537

Exp number, first 60 AAs:

20.15387

Total prob of N-in:

0.53362

POSSIBLE N-term signal

sequence

inside

1  -  27

TMhelix

28  -  45

outside

46  -  59

TMhelix

60  -  82

inside

83  -  94

 

 

Pi

286.409361

Theta

197.172611

Tajima's D

1.370557

CLR

0

CSRT

0.754662266886656

Interpretation

Uncertain