Gene

KWMTBOMO09187

Pre Gene Modal

BGIBMGA003359

Annotation

PREDICTED:_probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]

Location

Bomo_Chr15(-):12800166-12801805      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.019

CDS

ATGAGGAAAAATTTGGATCCTTTTGATGAGTATTCGGACGAGGTCTTGATAAATGCACTGAAAAGTGTAGAGTTGCAAGGCGAAGGAGAGAGCGTCGGTGTACTTTACAAAGACGTGTCTGAAGGTGGATCAAACTTCAGTGTGGGAGAACGCCAACTCGTATGTTTAGCGAGAGCCATCGTCCACAACGACCGAATTTTAGTACTGGACGAGGCGACCGCTAATGTCGATGCTCAAACAGACTCCTTGATTCAAAACACCATAAGGGAACACTTCAAAGAATGCACTGTGCTTACCATTGCGCACAGATTGAACACTGTTATAGATTCTAACAAGATTTTGGTGCTAGACGCGGGTCGTCTGGTAGAGTTCGACCATCCTCATATACTTCTGCAAAACAAGAGAGGGCAATTTCGTAAAATGGTGCAGGAAACAGGCCCGTCGATGTCGAATTTACTCCACAAACTAGCCTCTCAGGTACATATCGCGATTTCTACTACAAGTAGTTATTAA

Protein

MRKNLDPFDEYSDEVLINALKSVELQGEGESVGVLYKDVSEGGSNFSVGERQLVCLARAIVHNDRILVLDEATANVDAQTDSLIQNTIREHFKECTVLTIAHRLNTVIDSNKILVLDAGRLVEFDHPHILLQNKRGQFRKMVQETGPSMSNLLHKLASQVHIAISTTSSY

Uniprot

H9J1H2   A0A437AXD7   A0A2H1W132   A0A194R8F6   A0A194PLB3   A0A2A4JL44   + More
A0A212EZV1   A0A2H1WZW7   A0A2S2NFH7   A0A2S2P1T6   A0A2S2PMX1   X1X5I6   A0A2H8TMZ3   A0A2S2P902   A0A2S2QWL0   I4DPT5   A0A2S2N873   A0A2S2PGL8   X1XE18   A0A1B6GVC5   H9JE22   A0A2H8TFY7   J9K7F8   A0A2H8TLL8   A0A2J7PFE3   A0A2S2N6S9   A0A2J7PFD7   A0A2S2NMZ1   A0A1Y1M7A5   A0A194R8Q5   A0A2H8TSM5   A0A3Q0J0E5   A0A2S2Q6Q3   X1WJ89   A0A0T6BAF4   A0A2S2P4A1   A0A3R5SMP1   A0A0U2UWB4   A0A1W4WE54   A0A1Y1K0R4   A0A2S2RAX4   A0A2H1VX11   A0A1Y1LEY2   A0A2A4K8A3   A0A1B6MDX5   A0A067R1W1   A0A1Y1MZE9   A0A0T6AV52   A0A1Y1MZF9   A0A2S2QUD0   A0A2J7RQK1   A0A1B6H9F8   A0A0F6PRF7   A0A2S2R1S3   A0A2S2QUB8   A0A1B6JNW6   A0A1Y1K8V4   J9JY34   A0A0S7EVT1   J9JVY4   G3WRB7   H3A152   A0A1Y1LFL8   A0A1U7STS0   J9JMQ8   A0A023F3H7   A0A194PK32   A0A1Y1JYH3   A0A1Y1K348   J9K122   J9KIT1   V5G0E4   A0A161UF20   A0A0S7F0A8   A0A1B6LUH8   A0A158V0F7   A0A2J7RQI7   A0A2S2QD43   A0A3P4NGD9   A0A0P4W3Q5   A0A0K8TLH7   A0A3B4DRQ9   A0A226NZD3   A0A3B4C130   J9K2I6   A0A069DYA9   A0A1W4WP56   A0A2J7RQJ0   A0A0V0G5R1   A0A2H4KAX0   A0A0C9PVS6   A0A2R4FXD2   K7GJB7   X1X215   A0A402EI62   A0A2P8YTD5   A0A1W4WE28   A0A026VTX4   A0A3B5MW06   U4UVZ2  

Pubmed

19121390    26354079    22118469    22651552    28004739    26637593    + More
24845553    25662100    21709235    9215903    25474469    27129103    26369729    24621616    26334808    17381049    29403074    24508170    23537049   

EMBL

BABH01023741    BABH01023742    BABH01023743    BABH01023744    RSAL01000296    RVE42812.1    + More
ODYU01005653    SOQ46723.1    KQ460615    KPJ13784.1    KQ459602    KPI93524.1    NWSH01001138    PCG72438.1    AGBW02011215    OWR47028.1    ODYU01012282    SOQ58506.1    GGMR01003311    MBY15930.1    GGMR01010715    MBY23334.1    GGMR01018190    MBY30809.1    ABLF02035621    GFXV01002853    MBW14658.1    GGMR01013310    MBY25929.1    GGMS01012319    MBY81522.1    AK403773    BAM19925.1    GGMR01000367    MBY12986.1    GGMR01015946    MBY28565.1    ABLF02042979    GECZ01003398    JAS66371.1    BABH01002489    BABH01002490    GFXV01001174    MBW12979.1    ABLF02014369    GFXV01002383    MBW14188.1    NEVH01025663    PNF15053.1    GGMR01000210    MBY12829.1    PNF15046.1    GGMR01005934    MBY18553.1    GEZM01038206    JAV81719.1    KPJ13630.1    GFXV01005154    MBW16959.1    GGMS01004220    MBY73423.1    ABLF02014368    LJIG01002640    KRT84300.1    GGMR01011553    MBY24172.1    MH172501    QAA95908.1    KT276302    ALS30429.1    GEZM01099515    JAV53285.1    GGMS01018004    MBY87207.1    ODYU01004966    SOQ45370.1    GEZM01059508    JAV71448.1    NWSH01000076    PCG79892.1    GEBQ01005888    JAT34089.1    KK853083    KDR11623.1    GEZM01016939    JAV91033.1    LJIG01022813    KRT78583.1    GEZM01016941    GEZM01016940    GEZM01016938    JAV91034.1    GGMS01012154    MBY81357.1    NEVH01001336    PNF43103.1    GECU01036358    JAS71348.1    KM453743    KP335688    AKC34058.1    AKC34900.1    GGMS01014778    MBY83981.1    GGMS01011917    MBY81120.1    GECU01006806    JAT00901.1    GEZM01091336    JAV56901.1    ABLF02027734    GBYX01473114    JAO08540.1    ABLF02027727    ABLF02027732    AEFK01129726    AEFK01129727    AEFK01129728    AEFK01129729    AEFK01129730    AEFK01129731    AEFK01129732    AEFK01129733    AEFK01129734    AEFK01129735    AFYH01243657    AFYH01243658    AFYH01243659    AFYH01243660    AFYH01243661    AFYH01243662    AFYH01243663    AFYH01243664    GEZM01061568    JAV70366.1    GBBI01002866    JAC15846.1    KPI93378.1    GEZM01099513    JAV53288.1    GEZM01099514    JAV53287.1    ABLF02035628    ABLF02035624    GALX01005041    JAB63425.1    KF828787    AIN44104.1    GBYX01473128    JAO08526.1    GEBQ01012668    JAT27309.1    KF828786    AIN44103.1    PNF43104.1    GGMS01006388    MBY75591.1    CYRY02020558    VCW97093.1    GDKW01000545    JAI56050.1    GDAI01002419    JAI15184.1    AWGT02000258    OXB72712.1    ABLF02014366    GBGD01000127    JAC88762.1    PNF43102.1    GECL01002731    JAP03393.1    KY484779    ASS36021.1    GBYB01005573    JAG75340.1    MF034776    AVT42142.1    AGCU01023494    AGCU01023495    AGCU01023496    AGCU01023497    AGCU01023498    AGCU01023499    ABLF02035626    BDOT01000013    GCF43884.1    PYGN01000371    PSN47509.1    KK107928    EZA47172.1    KB632390    ERL94421.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000218220    UP000007151    + More
UP000007819    UP000235965    UP000079169    UP000192223    UP000027135    UP000007648    UP000008672    UP000189704    UP000261440    UP000198419    UP000007267    UP000288954    UP000245037    UP000053097    UP000261380    UP000030742   

PRIDE

H9J1H2    H9JE22   

Pfam

PF00005   ABC_tran        + More
PF00664   ABC_membrane
PF16363   GDP_Man_Dehyd

Interpro

IPR017871   ABC_transporter_CS        + More
IPR003593   AAA+_ATPase       
IPR003439   ABC_transporter-like       
IPR036640   ABC1_TM_sf       
IPR027417   P-loop_NTPase       
IPR011527   ABC1_TM_dom       
IPR030240   ABCC4       
IPR000788   RNR_lg_C       
IPR016040   NAD(P)-bd_dom       
IPR036291   NAD(P)-bd_dom_sf       
IPR030244   Yor1       
IPR009147   CFTR/ABCC7       

SUPFAM

SSF52540   SSF52540        + More
SSF90123   SSF90123       
SSF51735   SSF51735       

Gene 3D

1.20.1560.10    

ProteinModelPortal

H9J1H2   A0A437AXD7   A0A2H1W132   A0A194R8F6   A0A194PLB3   A0A2A4JL44   + More
A0A212EZV1   A0A2H1WZW7   A0A2S2NFH7   A0A2S2P1T6   A0A2S2PMX1   X1X5I6   A0A2H8TMZ3   A0A2S2P902   A0A2S2QWL0   I4DPT5   A0A2S2N873   A0A2S2PGL8   X1XE18   A0A1B6GVC5   H9JE22   A0A2H8TFY7   J9K7F8   A0A2H8TLL8   A0A2J7PFE3   A0A2S2N6S9   A0A2J7PFD7   A0A2S2NMZ1   A0A1Y1M7A5   A0A194R8Q5   A0A2H8TSM5   A0A3Q0J0E5   A0A2S2Q6Q3   X1WJ89   A0A0T6BAF4   A0A2S2P4A1   A0A3R5SMP1   A0A0U2UWB4   A0A1W4WE54   A0A1Y1K0R4   A0A2S2RAX4   A0A2H1VX11   A0A1Y1LEY2   A0A2A4K8A3   A0A1B6MDX5   A0A067R1W1   A0A1Y1MZE9   A0A0T6AV52   A0A1Y1MZF9   A0A2S2QUD0   A0A2J7RQK1   A0A1B6H9F8   A0A0F6PRF7   A0A2S2R1S3   A0A2S2QUB8   A0A1B6JNW6   A0A1Y1K8V4   J9JY34   A0A0S7EVT1   J9JVY4   G3WRB7   H3A152   A0A1Y1LFL8   A0A1U7STS0   J9JMQ8   A0A023F3H7   A0A194PK32   A0A1Y1JYH3   A0A1Y1K348   J9K122   J9KIT1   V5G0E4   A0A161UF20   A0A0S7F0A8   A0A1B6LUH8   A0A158V0F7   A0A2J7RQI7   A0A2S2QD43   A0A3P4NGD9   A0A0P4W3Q5   A0A0K8TLH7   A0A3B4DRQ9   A0A226NZD3   A0A3B4C130   J9K2I6   A0A069DYA9   A0A1W4WP56   A0A2J7RQJ0   A0A0V0G5R1   A0A2H4KAX0   A0A0C9PVS6   A0A2R4FXD2   K7GJB7   X1X215   A0A402EI62   A0A2P8YTD5   A0A1W4WE28   A0A026VTX4   A0A3B5MW06   U4UVZ2  

PDB

6BHU     E-value=3.50573e-37,     Score=383

KEGG

101741236    K05673 ATP-binding cassette, subfamily C (CFTR/MRP), member 4 | (RefSeq) probable multidrug resistan

PATHWAY

02010    ABC transporters - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0042626   GO:0016021   GO:0016887   GO:0016323   GO:0031088   GO:0032310   GO:0060271   GO:0055114   GO:0006260   GO:0005254   GO:0098754   GO:0005886   GO:1902017   GO:0015562   GO:0006468   GO:0005739   GO:0016776   GO:0006811   GO:0016020   GO:0016876   GO:0043039  

PANTHER

PTHR24223:SF393   PTHR24223:SF271  

Length:

170

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00081

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10267

outside

1  -  170

 

 

Pi

231.273851

Theta

181.244397

Tajima's D

0.868506

CLR

0.034426

CSRT

0.619769011549423

Interpretation

Uncertain