SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09186
Pre Gene Modal
BGIBMGA003392
Annotation
PREDICTED:_exocyst_complex_component_2_[Bombyx_mori]
Full name
Exocyst complex component 2      
Alternative Name
Exocyst complex component Sec5
Location in the cell
Cytoplasmic   Reliability : 2.429
 

Sequence

CDS
ATGGGTCCACCCCCCGTAGTAACGGGGATATCTCCAAAAGAGGGTCCTCCTGGAACGAGAGTCACAATACGTGGAGAATTTCTTGGCACTAGTGCTATAGATCTAATCGGTCTTAAAATATGTGGTTGTGACTGTCTGCTATCAGCTGAATGGAAAAGTAAGAATAAAGTAGTTGCACGCTCAGGACCATGCAAAGGACTTGGAGATATTACTGTCACCACCCGTTCTGGAGGAGAGGGTACATCCACAGTTCAGTTCCGAGGTTACCATGAATCAATCGGTCCTGTAAAAGAAAGTGCAGTGTGGGTAGAGGAAGCAGCGCCACCATCTCTGCCATGGGGTAGGCGGCCCATGTCTCCGACAACCTACACTCCACCTGACCCTCTGGGTTTGTCAACCGAAGGGGAAGACTGCAAATTTCCTGAAGAGGAACTACATGAGATGTTTCCCGATGGATCAGGTAAATTGTCAGAAGAAAATTTTCAACCTGGATGGTATTTATTGGAGCATCACAGCAACACTTCTTTTGAAGACTTAAAAGCCGGAATGGTGTTCTTGCAGCGAAAGGTAGAAGGTCAGAAAGAAGGACAATTGAGCTTCCTAAAAGCGAACACTGGTGCTGTCATGGATCAACTCGATAGGCTGGTTCTACTTAAGAACATGTATGAAGAAGATCAGAGAAAGAACGGCAAAGAACCATTACAAAGTCTTGAAACAGCTATTGAAGATTCGATTAAACTGGCCGATTCGTTGTTCTCGGAGATATTGTCGCGCAAAGAGAACGCGGACAAAACGCGCGAGGCGCTCTCGTTGCTGACTCGCCACAAGTTCCTCTTCCAGCTGCCGTCCTCCATAGATCAGAACATACGCAAGAAGGAATACGACCTGGTCGTTAATGACTACAACAGAGTCAAGAATCTGTTCGGGAATACAGATGTGAAGCTCTTCCAAAAAATATTATCCGAAATCGACAAAAAAATTGAAGATTTGAAAGAGAAATTGTTTGTCAGAATGAAGACCATGCCAATCAATGTCCAGGAACAAATGAAATATATCAGGTTGTTAATAAGTTTGAAATGGGAAGAGGACGCGGCGTGGGTGGCCATAACCGCTCGCAAGGAGTACCTGATGAGTCTCCTGAATAAAGTCAAAGATCATTTCAAACAAAAAGAAGAACAAGACAATAACGAGAAAGGGAAGCGGCACAAGTCCCGCGAGGAGGGCGAGGCGGCGCGTCGCTCGGCGTGGTGCGGCGCGGCGTGCGCGGCGCTGTCGGCGGAGTTGGCGGCGCTGTGGGCGCTGGCGCGCGCTTACTTCGCCGCCGAGCTCGCCGGGCAGCCGGCCTTATCCGAGCGACACGCGCAGTTCAAGGAAATGATAATAGCTGGTGTCGAATTATTTTCGGAGCATATGCGCGCCTGTCTGCTGTCGGGCGGCGGCGTCACTTCCGCGGACGCGGCGCGGGCCCGGCTCGTTGCCAATCTGCGGCACCTCAGGGAGGCGTACGAGTCTCTGCTGAAATTGGATCTGCCCTCACAGCCACTGAGCATAGTGGAGCGCGTGATATACGACTACCGCGTGCACGGCATGGTCGTGTTCCTTCAGCGAGCTCTCAAGAGGGTTAAAGGTCTCGCTGACAAGGAAACCTGGAAGATCGAAGAGTTCACCGAATATGGAGCCATCACTAAACTGCCTCATCTATTGGAGACGTACGTGAAGGAGGCGCTGTCGGATATTCACAAGTGCGTGTGGTGCGGCGGGCGGCGTGAGAGTGCGGCGCTGGACGCGGGCCCGCTGCACGAGCACACGCGGCACGTGCTGCACGCCTACACCAGGGTGCTCGACGCGCTCGCCAACGACCACTCGGGACAGGACTTCAACAACACGAGCTTGTCGGTGGCGTTGGACCAGCGGCTGGAGGAGACGGCGGCGAGCGGCGCGGCGGCGGACGAGGGCGGCAGCTGGCAGCGGCGCCTGCTCGTGGCGGCGGTCAACGCGCGCTACACCAGGCGCGTCACGCTCGCCAACATCGCGGCGGCCTTTGACGAATGCACATTCCCGCAGCCCACGCAAGCACTAAAATCTGCCGAGGAATCGTTGAGTTCTCTAGAAGCGTCCATAGCGGAAACTTACCTAGAGCACAAGGGTGACCCCCTGGTGGGCACCATCGAGCCCAGCATGTACATGGGGAGGCACAAGGTGGCCTCCGCGGAGCTCGTCGACGACGCGCGCCCTTATGTCTACGAGATCATTAACAACCTAATAGCTGTACACGCTGAGACTGACAGCGTGTGTGGCGCGTCGGCGGGGCGCTACGTGCGCGACATCTGCGAGACTGTGTGCGAGGAGGTGGCGCGGCTGGCGGCGTGCGCTCCCCCCGCGCTGCCCCGCCCCGCCGCCTTCCGCGCCACGCTCGAGTACACGCTGCTCTCCGTCGCCATCAGGGACCACCTCACCAGGAAGGCAGAAAACTACTTAAAGGAGGCTCTAGCGGCCGTGCCGCCGCTTGAACTTGAAGAAGATAAAATACGTATGCAAAGTATTGTACAGGATTTCAAGAAACGAATGGCACTTCAGCTGGCGAGTTTGAATTGTAACACGGAGACAGTTTAA
Protein
MGPPPVVTGISPKEGPPGTRVTIRGEFLGTSAIDLIGLKICGCDCLLSAEWKSKNKVVARSGPCKGLGDITVTTRSGGEGTSTVQFRGYHESIGPVKESAVWVEEAAPPSLPWGRRPMSPTTYTPPDPLGLSTEGEDCKFPEEELHEMFPDGSGKLSEENFQPGWYLLEHHSNTSFEDLKAGMVFLQRKVEGQKEGQLSFLKANTGAVMDQLDRLVLLKNMYEEDQRKNGKEPLQSLETAIEDSIKLADSLFSEILSRKENADKTREALSLLTRHKFLFQLPSSIDQNIRKKEYDLVVNDYNRVKNLFGNTDVKLFQKILSEIDKKIEDLKEKLFVRMKTMPINVQEQMKYIRLLISLKWEEDAAWVAITARKEYLMSLLNKVKDHFKQKEEQDNNEKGKRHKSREEGEAARRSAWCGAACAALSAELAALWALARAYFAAELAGQPALSERHAQFKEMIIAGVELFSEHMRACLLSGGGVTSADAARARLVANLRHLREAYESLLKLDLPSQPLSIVERVIYDYRVHGMVVFLQRALKRVKGLADKETWKIEEFTEYGAITKLPHLLETYVKEALSDIHKCVWCGGRRESAALDAGPLHEHTRHVLHAYTRVLDALANDHSGQDFNNTSLSVALDQRLEETAASGAAADEGGSWQRRLLVAAVNARYTRRVTLANIAAAFDECTFPQPTQALKSAEESLSSLEASIAETYLEHKGDPLVGTIEPSMYMGRHKVASAELVDDARPYVYEIINNLIAVHAETDSVCGASAGRYVRDICETVCEEVARLAACAPPALPRPAAFRATLEYTLLSVAIRDHLTRKAENYLKEALAAVPPLELEEDKIRMQSIVQDFKKRMALQLASLNCNTETV

Summary

Description
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Subunit
Component of the exocyst complex.
The exocyst complex is composed of Sec3/Exoc1, Sec5/Exoc2, Sec6/Exoc3, Sec8/Exoc4, Sec10/Exoc5, Sec15/Exoc6, Exo70/Exoc7 and Exo84/Exoc8.
Similarity
Belongs to the SEC5 family.
Keywords
Complete proteome   Exocytosis   Protein transport   Reference proteome   Transport  
Feature
chain  Exocyst complex component 2
EMBL
BABH01023736    BABH01023737    NWSH01001138    PCG72436.1    KQ459602    KPI93523.1    + More
KQ460615    KPJ13783.1    AGBW02011215    OWR47027.1    RSAL01000296    RVE42811.1    KK107020    QOIP01000006    EZA62577.1    RLU21136.1    KZ288215    PBC32524.1    GEBQ01018644    JAT21333.1    GL443213    EFN62457.1    KQ434819    KZC06954.1    KQ435821    KOX72399.1    GL451420    EFN79324.1    GEDC01007291    JAS30007.1    GL762106    EFZ22222.1    LBMM01009994    KMQ87737.1    ADTU01027574    ADTU01027575    KQ977106    KYN05756.1    JXUM01013058    KQ560367    KXJ82784.1    DS231831    EDS31273.1    AXCN02001149    CH477623    EAT38146.1    GFDL01012787    JAV22258.1    KQ414727    KOC62504.1    KQ769068    OAD52986.1    ADMH02001345    ETN62942.1    OUUW01000004    SPP79841.1    GEZM01044126    JAV78511.1    CM000157    EDW87539.1    CH379060    EAL33474.1    CH902624    EDV33229.1    AE014134    AY069793    CH479180    EDW28544.1    CH954177    EDV57622.2    APCN01000910    AAAB01008987    EAA00851.3    AXCM01000028    GFXV01007571    MBW19376.1    CH940649    EDW64787.1    GAKP01014474    JAC44478.1    GGMR01019526    MBY32145.1    GDHF01030622    GDHF01029639    GDHF01018491    JAI21692.1    JAI22675.1    JAI33823.1    CH933807    EDW11462.1    CH916368    EDW04050.1    GDAI01000373    JAI17230.1    CH963852    EDW75442.1    CH676463    EDW44612.1    GAMC01007559    GAMC01007557    JAB98998.1    CP012523    ALC38894.1    CM000361    CM002910    EDX03616.1    KMY87893.1    GBXI01000812    JAD13480.1    ATLV01018748    KE525248    KFB43337.1    LJIG01022627    KRT79559.1    UFQS01001195    UFQT01001195    UFQT01001870    SSX09631.1    SSX29427.1    SSX32042.1    CVRI01000065    CRL05667.1    DS235430    EEB15670.1    AJVK01010180    AJVK01010181    AJVK01010182    JXJN01024952    JXJN01024953    GDHC01014812    GDHC01001226    JAQ03817.1    JAQ17403.1    AJWK01008030    AJWK01008031    GGMS01010015    MBY79218.1    CCAG010005473    GFJQ02005108    JAW01862.1    GFPF01007697    MAA18843.1   
Pfam
PF01833   TIG        + More
PF15469   Sec5
PF05450   Nicastrin
PF18266   Ncstrn_small
PF04811   Sec23_trunk
PF00626   Gelsolin
PF08033   Sec23_BS
PF04815   Sec23_helical
PF04810   zf-Sec23_Sec24
Interpro
IPR014756   Ig_E-set        + More
IPR002909   IPT_dom       
IPR013783   Ig-like_fold       
IPR029175   EXOC2/Sec5       
IPR039481   EXOC2/Sec5_N_dom       
IPR001810   F-box_dom       
IPR008710   Nicastrin       
IPR041084   Ncstrn_small       
IPR042044   EXOC6/Sec15_C_dom2       
IPR036175   Sec23/24_helical_dom_sf       
IPR036465   vWFA_dom_sf       
IPR006895   Znf_Sec23_Sec24       
IPR029006   ADF-H/Gelsolin-like_dom_sf       
IPR007123   Gelsolin-like_dom       
IPR036174   Znf_Sec23_Sec24_sf       
IPR041742   Sec24-like_trunk_dom       
IPR006896   Sec23/24_trunk_dom       
IPR036180   Gelsolin-like_dom_sf       
IPR012990   Sec23_24_beta_S       
IPR006900   Sec23/24_helical_dom       
SUPFAM
SSF81296   SSF81296        + More
SSF81811   SSF81811       
SSF82919   SSF82919       
SSF53300   SSF53300       
SSF82754   SSF82754       
PDB
1HK6     E-value=3.07671e-25,     Score=289

Ontologies

Topology

Length:
870
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00552999999999999
Exp number, first 60 AAs:
0.00062
Total prob of N-in:
0.00017
outside
1  -  870
 
 

Population Genetic Test Statistics

Pi
232.228621
Theta
162.96479
Tajima's D
1.38961
CLR
0.272589
CSRT
0.760461976901155
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号