Gene

KWMTBOMO09185

Pre Gene Modal

BGIBMGA003360

Annotation

putative_growth_hormone_regulated_TBC_protein_1_[Danaus_plexippus]

Location

Bomo_Chr15(-):12768082-12771665      View in EpiBrowser

Full name

Growth hormone-regulated TBC protein 1-A      

Location in the cell

Cytoplasmic   Reliability : 1.975 PlasmaMembrane   Reliability : 1.411

CDS

ATGGCACATTCAACGTTCAGCGCTGTAGACGAGTACGGATTTGAGAGGCACGATGACTTCGACTACGAGAGCTACGAAGACTTTATGTCAAATTATTTAAAAGTTCTCGCTACTCGTGCTCAAAAATGGGCCGCTCTACTCGGCGAAGGAAAGTCGGTCAAACGAACCAATACCGTCAAGCGATATGTTCGTAAAGGAATACCCAGTGAACATCGACCATCAGTGTGGATGGCCATATCTGAAGCTGATAAAATGAGAGAACAATTCCCTGATTTGTATCAGAAAATATTAGACAGTCCGTTTGAAAAGGAGCTTGTGGATTTAGTTAAAACAGACTTGCCTAGAACCTTTCCCGATAATATATATTTTACAAAGGAGGCAAACCATCAAACACATTTGTTCAACATTCTGATTGCCTATGCTCACAACAACAGACTTGTCGGGTATTGCCAAGGTCTTAATTACATTGCAGGCTTACTATTACTCGCTACTAAAAGTGAAGAAACATCATTTTGGCTACTGAAAGTACTGGTTGAGAAGATTCTACCAGACTACTACACCAAAACAATGGACGGTCTGATAGTGGATATTGAAGTTCTCTCAGAATTAGTCAAAGCCAAAGTACCAGATGTGCATCAGCATGTTATAAATTTAGGTCTCCCGTGGGCCGTTATAACAACGAAATGGTTTGTTTGCCTCTTTGCGGAAGTTCTACCAATCGAAACCGTATTGCGGATCTGGGATTGTTTGTTTTATGAGGGTTCAAAAATACTATTCCGTGTATGTTTAACACTCATCAAAGCAAACAAGGCTGCGATCATGCAGTGCAATGATTTCACTTCTTTGGCGGAATGTTTTAAGGCAATCGTTAAAAATGCTAGCGCACTGCACTGCCATGAGTTTATGCAGTCAATTTTTAAAGTGCCCGGTACGTTGTCTAACACAACCATAATTAAATTACGAGCCCGTATCGCGAAACAGCGCCGTGAACAACAACAAAAGGAGCCGCGATGA

Protein

MAHSTFSAVDEYGFERHDDFDYESYEDFMSNYLKVLATRAQKWAALLGEGKSVKRTNTVKRYVRKGIPSEHRPSVWMAISEADKMREQFPDLYQKILDSPFEKELVDLVKTDLPRTFPDNIYFTKEANHQTHLFNILIAYAHNNRLVGYCQGLNYIAGLLLLATKSEETSFWLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVITTKWFVCLFAEVLPIETVLRIWDCLFYEGSKILFRVCLTLIKANKAAIMQCNDFTSLAECFKAIVKNASALHCHEFMQSIFKVPGTLSNTTIIKLRARIAKQRREQQQKEPR

Keywords

Complete proteome   GTPase activation   Reference proteome  

Feature

chain  Growth hormone-regulated TBC protein 1-A

Uniprot

A0A2A4JK23   A0A1E1W744   A0A194R809   A0A194PJL8   A0A437AXG1   A0A1E1WBF8   + More
A0A2H1V8G7   A0A0L7L4A6   A0A212EZU3   S4PEK4   A0A067QVL3   A0A2J7QTK9   A0A0M9A6S6   A0A2J7QTK4   A0A026WCN9   A0A088A603   A0A2A3EC54   E2A414   E2BJY4   A0A158NJB5   A0A232F9C7   A0A151K3P6   E9IZF8   A0A195C524   A0A151JRK0   K7IRB0   A0A154P3R0   A0A1B6JDY0   A0A310SIL6   A0A195EYP8   A0A151X0U2   A0A195BJT9   A0A1B6BWZ9   F4W769   A0A0A9VZR3   A0A069DRX6   A0A0A9VWR1   A0A0V0GCK6   A0A023F8D8   A0A0P4VX61   R4FNZ6   E0VBX2   A0A1Y9H2L7   D6WKR3   A0A182MT53   A0A182XXE1   A0A182R5X1   W5JUQ1   A0A182VXV2   A0A182QP24   A0A182LAP6   Q7QFX0   A0A182I8T4   A0A182WV59   A0A182VLI7   A0A182F9G9   A0A182IQ87   A0A0K8TLG8   A0A2S2R3U3   A0A182P787   A0A1Y1NB13   A0A336LJ20   A0A1Z5LH56   A0A087UBZ0   A0A2J7QTK6   A0A1Q3FDP1   A0A293MTT0   A0A1Q3FDG7   J9K4E5   A0A2H8TLZ7   A0A1Q3FDS6   A0A2P6KG74   A0A1S4F9Y8   A0A1L8DVJ4   A0A293LAM9   B0WH01   A0A2S2NJL1   G1K8E4   A0A182GUW9   W5MUJ4   E9G1D9   A0A1W4XCX1   G3WVG1   A0A0P6JJS4   A0A0P6BB41   A0A2R5LLY0   T1PJ41   Q6PBU5   F7DTD4   A0A162S407   A0A093IDH3   A0A0A0B0V2   A0A091I2P9   A0A091ESG4   A0A093Q2L1   U3J6Q1   A0A2I0MSU4   A0A1I8Q5U0   A0A1V4J4V0  

Pubmed

26354079    26227816    22118469    23622113    24845553    24508170    + More
20798317    21347285    28648823    21282665    20075255    21719571    25401762    26334808    25474469    27129103    20566863    18362917    19820115    25244985    20920257    23761445    20966253    12364791    14747013    17210077    26369729    28004739    28528879    26483478    21292972    21709235    25315136    17495919    23749191    23371554   

EMBL

NWSH01001138    PCG72435.1    GDQN01008383    JAT82671.1    KQ460615    KPJ13782.1    + More
KQ459602    KPI93522.1    RSAL01000300    RVE42765.1    GDQN01006787    JAT84267.1    ODYU01001202    SOQ37096.1    JTDY01003014    KOB70307.1    AGBW02011215    OWR47026.1    GAIX01007035    JAA85525.1    KK852901    KDR14094.1    NEVH01011194    PNF31918.1    KQ435736    KOX77093.1    PNF31919.1    KK107293    EZA53441.1    KZ288305    PBC28779.1    GL436519    EFN71866.1    GL448708    EFN83993.1    ADTU01017495    NNAY01000700    OXU26917.1    LKEZ01003744    KYN50712.1    GL767124    EFZ14045.1    KQ978317    KYM95276.1    KQ978579    KYN30008.1    KQ434809    KZC06487.1    GECU01010292    JAS97414.1    KQ760706    OAD59324.1    KQ981920    KYN33009.1    KQ982612    KYQ53864.1    KQ976453    KYM85438.1    GEDC01031486    JAS05812.1    GL887813    EGI69953.1    GBHO01042963    GBRD01017641    JAG00641.1    JAG48186.1    GBGD01002071    JAC86818.1    GBHO01042962    GBRD01017642    JAG00642.1    JAG48185.1    GECL01000575    JAP05549.1    GBBI01001111    JAC17601.1    GDKW01001340    JAI55255.1    ACPB03008068    GAHY01001099    JAA76411.1    DS235044    EEB10878.1    KQ971342    EFA02990.1    AXCM01002150    ADMH02000438    ETN66479.1    AXCN02001147    AAAB01008844    EAA06015.4    APCN01003116    GDAI01002429    JAI15174.1    GGMS01015524    MBY84727.1    GEZM01013031    JAV92807.1    UFQT01000027    SSX18082.1    GFJQ02000729    JAW06241.1    KK119151    KFM74879.1    PNF31920.1    GFDL01009359    JAV25686.1    GFWV01018653    MAA43381.1    GFDL01009424    JAV25621.1    ABLF02025777    ABLF02025780    GFXV01003379    MBW15184.1    GFDL01009397    JAV25648.1    MWRG01012782    PRD25346.1    GFDF01003623    JAV10461.1    GFWV01000943    MAA25673.1    DS231931    EDS27326.1    GGMR01004347    MBY16966.1    JXUM01090046    KQ563812    KXJ73249.1    AHAT01003524    AHAT01003525    GL732529    EFX86647.1    AEFK01128438    AEFK01128439    GDIQ01005302    JAN89435.1    GDIP01017720    JAM85995.1    GGLE01006410    MBY10536.1    KA648822    AFP63451.1    BC059581    LRGB01000084    KZS20994.1    KK555077    KFV97611.1    KL873489    KGL98960.1    KL218156    KFP02809.1    KK718990    KFO60823.1    KL671632    KFW82896.1    ADON01087478    AKCR02000003    PKK32749.1    LSYS01009367    OPJ66837.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000283053    UP000037510    UP000007151    + More
UP000027135    UP000235965    UP000053105    UP000053097    UP000005203    UP000242457    UP000000311    UP000008237    UP000005205    UP000215335    UP000078541    UP000078542    UP000078492    UP000002358    UP000076502    UP000075809    UP000078540    UP000007755    UP000015103    UP000009046    UP000075884    UP000007266    UP000075883    UP000076408    UP000075900    UP000000673    UP000075920    UP000075886    UP000075882    UP000007062    UP000075840    UP000076407    UP000075903    UP000069272    UP000075880    UP000075885    UP000054359    UP000007819    UP000002320    UP000001646    UP000069940    UP000249989    UP000018468    UP000000305    UP000192223    UP000007648    UP000095301    UP000000437    UP000002280    UP000076858    UP000053858    UP000054308    UP000052976    UP000053258    UP000016666    UP000053872    UP000095300    UP000190648   

Pfam

PF00566   RabGAP-TBC

Interpro

IPR000195   Rab-GTPase-TBC_dom        + More
IPR035969   Rab-GTPase_TBC_sf       

SUPFAM

SSF47923   SSF47923       

ProteinModelPortal

A0A2A4JK23   A0A1E1W744   A0A194R809   A0A194PJL8   A0A437AXG1   A0A1E1WBF8   + More
A0A2H1V8G7   A0A0L7L4A6   A0A212EZU3   S4PEK4   A0A067QVL3   A0A2J7QTK9   A0A0M9A6S6   A0A2J7QTK4   A0A026WCN9   A0A088A603   A0A2A3EC54   E2A414   E2BJY4   A0A158NJB5   A0A232F9C7   A0A151K3P6   E9IZF8   A0A195C524   A0A151JRK0   K7IRB0   A0A154P3R0   A0A1B6JDY0   A0A310SIL6   A0A195EYP8   A0A151X0U2   A0A195BJT9   A0A1B6BWZ9   F4W769   A0A0A9VZR3   A0A069DRX6   A0A0A9VWR1   A0A0V0GCK6   A0A023F8D8   A0A0P4VX61   R4FNZ6   E0VBX2   A0A1Y9H2L7   D6WKR3   A0A182MT53   A0A182XXE1   A0A182R5X1   W5JUQ1   A0A182VXV2   A0A182QP24   A0A182LAP6   Q7QFX0   A0A182I8T4   A0A182WV59   A0A182VLI7   A0A182F9G9   A0A182IQ87   A0A0K8TLG8   A0A2S2R3U3   A0A182P787   A0A1Y1NB13   A0A336LJ20   A0A1Z5LH56   A0A087UBZ0   A0A2J7QTK6   A0A1Q3FDP1   A0A293MTT0   A0A1Q3FDG7   J9K4E5   A0A2H8TLZ7   A0A1Q3FDS6   A0A2P6KG74   A0A1S4F9Y8   A0A1L8DVJ4   A0A293LAM9   B0WH01   A0A2S2NJL1   G1K8E4   A0A182GUW9   W5MUJ4   E9G1D9   A0A1W4XCX1   G3WVG1   A0A0P6JJS4   A0A0P6BB41   A0A2R5LLY0   T1PJ41   Q6PBU5   F7DTD4   A0A162S407   A0A093IDH3   A0A0A0B0V2   A0A091I2P9   A0A091ESG4   A0A093Q2L1   U3J6Q1   A0A2I0MSU4   A0A1I8Q5U0   A0A1V4J4V0  

PDB

4P17     E-value=1.62239e-38,     Score=399

KEGG

101741555    K19953 TBC1 domain family member 6 | (RefSeq) growth hormone-regulated TBC protein 1-A-like

GO

GO:0016021   GO:0005096   GO:0005623   GO:0090630   GO:0006886   GO:0017137  

Length:

337

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.51197

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.03150

outside

1  -  337

 

 

Pi

179.002889

Theta

190.364538

Tajima's D

-0.189799

CLR

236.669818

CSRT

0.316034198290085

Interpretation

Uncertain