SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09183  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003361
Annotation
Karyopherin_beta_3_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 2.09
 

Sequence

CDS
ATGGCAGGAGATCAGGCGCAATTTTATCAGTTGCTAAATACTTTACTTTCAACCGATAATGATATCAGATCCCAAGCAGAGGACGCATACAACAACATTCCAACAGAAACAAAAGTAGTGCACCTAGTGAATTCAATTCAAAATGCAGACATTGCCGAAGATGTGCGTCAAACGGCGGCCGTGCTGTTACGAAGATTATTTAGTGCAGAATTCTTTGAGTTCTTCCCGAAATTGCCATTTGAGCAGCAGACAGTGCTCAGAGAACAATTGTTACTCACCCTTCAAATGGATCTTTCCCAGTACTTACGAAGAAAGGTTTGTGATGTAGTCTCTGAACTGGCTAGGAATCATATTGATGACGATGGCAACAACCAGTGGCCTGAGTTCCTACAGTTCATGTTTACCTGTGCCAGTGCGCAAGATCCAAACATCAAAGAAGCTGGTATTAGAATGTTTACATCTGTACCAGGTGTATTTGGAAATCGTCAGACTGAAAACTTGGATGTGATAAAAGGCATGTTAATATCTGCTTTGCAGCCAAATGAATCAATGGCTTTGCGAACTCAGGCAGTTAAAGCTGTAGGCGCCTTTATACTACTACACGATAAGGAGCCCATCATACAAAAGCATTTCAGTGATGTTCTTCTACCTTTGATGCAGGTAATAGTTCTGTCTATTGAAGCAGCTGATGATGACTCTGCATTGAAAGTACTCATTGAGTTAGCAGAATCAACACCTAAATTTCTCCGACCCCAGCTGGAGACCATATTCCAAGTTTGCATAAAGGTGGTTGGGGACAAAGATGCTGAAGATAACTGGCGCCAACTGGCACTTGAAGCGATGGTAACATTATGTGAGACAGCACCAGCCATGGTGCGTAAACAAGTGCCCAATGCCGTGAGCATGCTCACTCCACTTGTACTTGAGATGATGTGTGAGCTTGATGAAGAGCCTGACTGGACCATACAGGACAACACTGCTGATGACGATAATGACCAGAATTATGTGGCAGCAGAATCAGCATTGGACCGCATGTGCTGTGGTCTTGGTGGCAAGATAATGCTGGGACTTATTGTGGGACAAGTACCTGTAATGTTGCAATCTGAAGATTGGAAGAGACGCCATGCTGCCTTGATGGCTGTCTCCTCAGCTGGTGAAGGGTGTCATAAACAGATGGAACAGATGCTCGACCAAGTTGTTACTGCTGTTCTTAATTACCTGAGTGACCCTCATCCCCGAGTACGTTATGCAGCTTGCAATGCAGTAGGGCAAATGTCAACTGATTTTGCACCAGTGTTTGAAAAAAAATTCCACAGCAAAGTTGTACCTGGACTTCTGATGGTGCTCGATGATAATGCTAACCCGCGTGTACAGGCTCATGCAGCAGCTGCTTTAGTAAACTTCAGTGAAGACTGTCCCAAACCTATCTTGACTCTGTATCTTGACCCATTAATGAAAAAGCTAGAGGCCGTCCTAACTACAAAATTTAAAGAGTTGGTTGAATGTGGTACAAAACTGGTACTCGAACAGATTGTGACAACAATCGCCTCAGTTGCAGACACTGTTGAGAAAGACTTTGTCAAATATTATGACAGACTCATGCCCTGTCTGAAGTATATAATTGCCAATGCTACTACTGATCAACTTAAGATGCTGCGTGGCAAGACAATAGAGTGTGTCAGTTTGATTGGACTAGCTGTTGGAGAAGAGAAATTCATGTCTGATGCATCTGAAGTGATGGATTTACTTCTTAAGACCCACACAGAAGGTGAACAGTTGCCTGCTGATGATCCTCAGACATCATATCTTATCTCAGCTTGGTCTAGAATTTGCAGAATAATGGGCAAGAAATTCTCACAATATTTACCGATGGTTATGGAGCCGGTAATGCGTACAGCAGCAATGAAGCCAGAAGTAGCACTTCTTGATAATGAAGATTTAGAAACCATTGAAGGAGACCTTGATTGGCATTTTGTCACACTAGGCGAACAACAAAACTTCGGCATTAAAACTGCTGGACTTGAAGACAAAGCTTCTGCTTGTGACATGTTAGTTTGCTATGCTCGAGAACTAAAGGAAGCATTTGCTGAATATGCTGAAGACGTTGTAAAGCTAATGGTGCCCATGTTGAAGTTTTATTTTCACGATAATGTGAGAACTGCTGCAGCAGAATCCCTGCCTTATCTCCTTGAATGCGCCCGCATTCGCGGCCCGCAGTATATTCAAGGAATGTGGGCTTACATAGTTCCTGAACTGCTTAAAGCCATTGACTCTGAGCCCGAACAAGAAGTGCAAGTTGAACTGCTCAACAGCTTAGCCAAATGTATCGAACTTTTGGGCATGGGTTGCCTTTCTAACAATGAGATGATGGCAGAAGTCTTGCGTATTCTCAACAAACTATTAACTGAACATTTCGAACGGGCTACTGAAAGGCGACAAAAGCGTGCCGACGAAGATTATGATGAGGTCTTAGAAGAACAATTAGCTGATGAAGATAATGAGGATGTGTACAGTTTGTCTCGCGTAGCAGATGTATTACATGCGCTCATGTCTGCTTACCGCGATTCGTTCTATCCTCATTTCGACACGTTGTTGCCCCATCTTGTGCAGCTACTTGCGCCTAATAGGCCTTATTCTGATCGCCAGTGGGCCATTTGTATTTTTGATGACATAATAGAATTCGGAGGTCCTGCTTGTGTGAAGTATCAAGATATATTCCTGGAGCCAATGTTGAATGCATTACGTGAATCTGAACCGGAAGTGCGTCAAGCCGCGGCCTACGGTTGCGGCGTGCTAGCACAGTTTGGTGACGTACAGTTTGCAGCCGCCTGCGCACGAGCTGTACCTCTTTTGGCCGCCATTGTCGCAGAGCCGGACGCACGCTCTCTTGAAAAGATCAATGCAACTGAAAATGCTATATCTGCCGTCGCTAAAATTATCAAATACAATCATTCGCAAATAAATAGGGATGAAATCATCACGCATTGGCTGACATGGTTACCGGTGACTGAAGATACCGAAGAAGCGCCTCACGTGTACGCCTTATTATGCGAGCTCGCGAGCAGCGGACACGGCGCTTTATCGACACCTGATGCCCCGCAACGTGTGCTGGCCACACTCGCCGAAGCGTTTCGCGCCGACGCTGTACCAAACGATAACCCTGTCTATGCGCAAATGGTTGCATTACTTCGACAGATACAGTCAAATGCCGAATTATTTAATTCATGTCTCATGACTTTAAGTAACGACCACAAGGAAGCTCTTCAGATAGCTCTGTCCACATAG
Protein
MAGDQAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAEFFEFFPKLPFEQQTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGAFILLHDKEPIIQKHFSDVLLPLMQVIVLSIEAADDDSALKVLIELAESTPKFLRPQLETIFQVCIKVVGDKDAEDNWRQLALEAMVTLCETAPAMVRKQVPNAVSMLTPLVLEMMCELDEEPDWTIQDNTADDDNDQNYVAAESALDRMCCGLGGKIMLGLIVGQVPVMLQSEDWKRRHAALMAVSSAGEGCHKQMEQMLDQVVTAVLNYLSDPHPRVRYAACNAVGQMSTDFAPVFEKKFHSKVVPGLLMVLDDNANPRVQAHAAAALVNFSEDCPKPILTLYLDPLMKKLEAVLTTKFKELVECGTKLVLEQIVTTIASVADTVEKDFVKYYDRLMPCLKYIIANATTDQLKMLRGKTIECVSLIGLAVGEEKFMSDASEVMDLLLKTHTEGEQLPADDPQTSYLISAWSRICRIMGKKFSQYLPMVMEPVMRTAAMKPEVALLDNEDLETIEGDLDWHFVTLGEQQNFGIKTAGLEDKASACDMLVCYARELKEAFAEYAEDVVKLMVPMLKFYFHDNVRTAAAESLPYLLECARIRGPQYIQGMWAYIVPELLKAIDSEPEQEVQVELLNSLAKCIELLGMGCLSNNEMMAEVLRILNKLLTEHFERATERRQKRADEDYDEVLEEQLADEDNEDVYSLSRVADVLHALMSAYRDSFYPHFDTLLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQAAAYGCGVLAQFGDVQFAAACARAVPLLAAIVAEPDARSLEKINATENAISAVAKIIKYNHSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST

Summary

EMBL
RSAL01000300    RVE42763.1    ODYU01001202    SOQ37098.1    GAIX01004018    JAA88542.1    + More
AGBW02011215    OWR47024.1    KQ460615    KPJ13780.1    AB264684    BAG30760.1    KQ459602    KPI93520.1    GDQN01010961    JAT80093.1    NWSH01001138    PCG72433.1    GDQN01009600    JAT81454.1    KZ288441    PBC25714.1    KQ414740    KOC62023.1    MH366222    QBB02031.1    LBMM01002897    KMQ94211.1    GL452088    EFN77942.1    KQ976396    KYM93057.1    ADTU01012030    KQ982215    KYQ58922.1    KQ980419    KYN16088.1    GL888115    EGI67149.1    KK852751    KDR17150.1    KK107087    QOIP01000001    EZA59936.1    RLU27273.1    KQ434809    KZC06650.1    NEVH01013250    PNF29318.1    KQ981727    KYN36903.1    GL435917    EFN72493.1    KQ977791    KYM99737.1    CH477643    EAT37896.1    GDHC01011549    JAQ07080.1    GBHO01040438    GBRD01012215    JAG03166.1    JAG53609.1    GFDL01013589    JAV21456.1    GFDL01013581    JAV21464.1    JXUM01042299    KQ561318    KXJ79010.1    DS232107    EDS35015.1    KQ971343    EFA03140.1    GECL01003571    JAP02553.1    GBGD01000222    JAC88667.1    GFTR01008564    JAW07862.1    GBBI01002746    JAC15966.1    NNAY01000707    OXU26865.1    GBYB01010174    JAG79941.1    UFQT01000257    SSX22471.1    GDKW01001180    JAI55415.1    ACPB03015581    AXCM01007023    GEZM01024997    JAV87651.1    AAAB01008844    EAA06045.3    APCN01003126    CH933806    EDW13655.1    GGFJ01001144    MBW50285.1    GBXI01002323    JAD11969.1    KA647062    KA649516    AFP61691.1    GGFK01000364    MBW33685.1    AXCN02000040    ADMH02001961    ETN60244.1    CH954181    EDV47806.1    GGFM01000194    MBW20945.1    CP012526    ALC46856.1    GGFK01000344    MBW33665.1    GGFK01000341    MBW33662.1    CH940650    EDW67063.1    CM000160    EDW95681.1    GANO01002234    JAB57637.1    GFDF01002947    JAV11137.1    CH916369    EDV93747.1    GAMC01001427    JAC05129.1    CH964232    EDW80548.1    GDRN01055802    JAI65914.1    KQ435719    KOX78914.1    CH902617    EDV44281.1    GFDF01002948    JAV11136.1    CM000070    EAL28521.1    CH479182    EDW34294.1    GDQN01006335    JAT84719.1    GAKP01006587    JAC52365.1    GDHF01014494    JAI37820.1    CM000364    EDX11634.1    CH480821    EDW54858.1    JRES01000091    KNC34206.1    OUUW01000007    SPP83609.1    AE014297    BT082093    AAF52107.1    ACQ41868.1    AGB95642.1    GFDG01002375    JAV16424.1    GL732605    EFX71831.1    GDIP01137924    JAL65790.1   
Pfam
PF18808   Importin_rep_4        + More
PF18829   Importin_rep_6
PF02985   HEAT
PF03810   IBN_N
Interpro
IPR041653   Importin_rep_4        + More
IPR016024   ARM-type_fold       
IPR040122   Importin_beta       
IPR041389   Importin_rep_6       
IPR034085   TOG       
IPR000357   HEAT       
IPR001494   Importin-beta_N       
IPR021133   HEAT_type_2       
IPR004155   PBS_lyase_HEAT       
SUPFAM
SSF48371   SSF48371       
PDB
3W3Z     E-value=3.52136e-111,     Score=1031

Ontologies

Topology

Length:
1094
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01781
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00076
outside
1  -  1094
 
 

Population Genetic Test Statistics

Pi
27.218103
Theta
218.712429
Tajima's D
0.246413
CLR
1.543441
CSRT
0.437678116094195
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 IMGLEDK 100.00 5e-08
26822097 IITEHFER 100.00 6e-08
25044914 YAAAPVAAAPVAAAPAPIYAR 100.00 6e-08
28556443 VVPGLLMVLDDNANPR 100.00 6e-08
28556443 LPFEQQTVLR 100.00 7e-08
28556443 VPEATQDELTSALDAAK 100.00 4e-06
28556443 SIQNADIAEDVR 100.00 1e-05
28556443 VLATLAEAFR 100.00 3e-04
28556443 AVPLLAAIVAEPDAR 100.00 0.001
28556443 AVPLLAAIVAEPDAR 100.00 0.001
26822097 VVPGIIMVIDDNANPR 100.00 0.003
26280517 SPGTIVVSTYAPCPDITVK 100.00 0.003
25044914 SQADVIIHEIMHSWTGNIVTNR 100.00 0.003
27102218 IPFEQQTVIR 100.00 0.003
28467696 SQAAAENFPFCTIDPNESR 100.00 0.003
28556443 INATENAISAVAK 100.00 0.005
28556443 YAACNAVGQMSTDFAPVFEK 100.00 0.005
25044914 VVGDIAQFMVQNK 100.00 0.015
27102218 VVHIVNSIQNADIAEDVR 100.00 0.015
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