Gene

KWMTBOMO09182  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003362

Annotation

PREDICTED:_choline-phosphate_cytidylyltransferase_B-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr15(-):12716824-12739415      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.488

CDS

ATGGCGTTGGCTGAACGGGATTCGTGTCACTACGGGCGGATACCACGCGCCGCGGCACTGGCCGGCACCGCGGGCCGCAAGGTCAGGGTCTACTCGGACGGGATCTACGACATGTTCCACCAGGGGCACGCGAGGCAATTGCAACAAGCGAAAACCGTCTTCCCTAATGTTTATCTAATAGTAGGAGTATGTAGTGACCAGCTGACGCACAGTCGCAAGGGCAGGACGGTTATGACCGAAGATGAGAGGTACGAAGCCGTCCGACATTGCAGATACGTTGATGAGGTCGTAAGAGACGCTCCGTGGGAGTACGACGAAGAGTTTCTGGAGAAGCACAAGATCGATTTTCTAGCACACGACGACATCCCGTACACGACCGAGGACTGCGAGGACACGTACGCAATGATCAAAGCGAAGGACATGTTCGTGGCGACGCAAAGGACCGAAGGTGTTTCGACATCGGATATAGTCGCGAGGATAGTACGCGACTACGATATATACGTTAGAAGGAATTTAGCGCGTGGATACTCGGCCAAGGAGCTCAACGTTTCATTCTTAAACGAGAAGAAATTTCGACTACAAAACAAAATGGACGAACTTAAAGATAAAGGAAAAAAGGTCATGACGAATATTGGTGAAAAACGCGTAGATATTCTAACGAAGTGGGAGGAGAAGTCTCGGGAGCTCATCGACGCCTTTCTGCTGCTGTTCGGCCCGGACGGGCGCCTCTCTAACATCTGGGAGTCCTCCAAGGGCCGCCTCATGCAGGCGCTCAGCCAGCCGCCCTCGCCGCGGGGCTCGCCGCCGCCCAGCGAGAACGGAGACCACTCGCCCTTGTATAGAAGTTCGGTGTCTCCTCCCCCAGCGAAGGCGCGGCGTCGGGAGCCGGACTGGGAGTCGCACGCAGATGCATCGGGCTCTGAGTGCTCTGGCGACGCCACGACGCCAGCGACGCGCCAGCTGACCGACCTCACGGACGACGGCTCCGACAGCGACGACGACTACCAGGACTCCAGCCCCTACCTGTAG

Protein

MALAERDSCHYGRIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPYTTEDCEDTYAMIKAKDMFVATQRTEGVSTSDIVARIVRDYDIYVRRNLARGYSAKELNVSFLNEKKFRLQNKMDELKDKGKKVMTNIGEKRVDILTKWEEKSRELIDAFLLLFGPDGRLSNIWESSKGRLMQALSQPPSPRGSPPPSENGDHSPLYRSSVSPPPAKARRREPDWESHADASGSECSGDATTPATRQLTDLTDDGSDSDDDYQDSSPYL

Uniprot

H9J1H5   S4NTZ9   A0A212EZV9   A0A3S2LAW0   A0A2A4JEB3   A0A2A4JDW1   + More
A0A2A4JEB2   A0A2H1V8G4   A0A2A4JCQ5   A0A310S452   A0A2A3ESH3   A0A154P450   A0A0C9R1A8   A0A087ZRD5   A0A0J7KJR2   A0A0L7QTZ0   E2C280   A0A195BYP8   A0A158NCQ4   E2A246   A0A1B6ISC1   A0A1B6J368   A0A195CH29   A0A1B6JMT2   A0A195F8F7   A0A195DTA9   A0A026WV93   A0A1B6HFM5   E9ILN7   A0A1B6GNX7   F4WF99   A0A067RBE5   A0A1B6GEG9   A0A2J7PDU8   A0A1B6G161   A0A2J7PDU6   A0A224XF80   A0A151XEW7   A0A0A9XZN8   K7IQ27   A0A2J7PDV4   A0A146L8P4   A0A0P4VKW1   A0A232EQS7   A0A0A9ZCF6   T1H8S6   R4WDL0   A0A1B6KFL6   A0A1B6MQK5   A0A1B6LJB2   A0A1B6L0Q5   E0VC11   A0A1W4X382   A0A1W4XE17   A0A1W4X3C1   T1J712   A0A1W4XDS5   A0A0M9A7N4   A0A1Y1JTS0   A0A1Y1JUP4   A0A1Y1JVT0   A0A1Y1JRF4   A0A0K8TNB8   A0A0P5CQK5   A0A0P5HT62   A0A2S2QC24   V5GVM5   A0A0P4WPB8   U4U4B4   A0A1D2NH47   T1GG87   U5ERQ0   A0A3R7SYX4   Q16PN8   J9EB30   A0A1S4FU28   D6WMA2   A0A2H8TEJ2   A0A1L8DYY7   J9JN73   A0A182GET3   A0A226ESQ0   A0A1I8MXN5   A0A147B9J9   T1PFM1   A0A0P5ZJX3   Q7YZF4   A0A1B0EZH6   A0A2R5LI04   N6SZ51   A0A1I8MXN1   A0A023EUC5   A0A3Q0J4M6  

Pubmed

19121390    23622113    22118469    20798317    21347285    24508170    + More
30249741    21282665    21719571    24845553    25401762    20075255    26823975    27129103    28648823    23691247    20566863    28004739    26369729    23537049    27289101    17510324    18362917    19820115    26483478    25315136    24945155   

EMBL

BABH01023731    GAIX01012016    JAA80544.1    AGBW02011215    OWR47023.1    RSAL01000300    + More
RVE42762.1    NWSH01001900    PCG69743.1    PCG69744.1    PCG69742.1    ODYU01001202    SOQ37099.1    PCG69741.1    KQ785468    OAD47054.1    KZ288193    PBC34079.1    KQ434809    KZC06651.1    GBYB01000651    GBYB01000652    GBYB01000655    JAG70418.1    JAG70419.1    JAG70422.1    LBMM01006376    KMQ90658.1    KQ414740    KOC62024.1    GL452088    EFN77943.1    KQ976396    KYM93056.1    ADTU01012028    GL435917    EFN72494.1    GECU01017874    JAS89832.1    GECU01014108    JAS93598.1    KQ977791    KYM99736.1    GECU01007162    JAT00545.1    KQ981727    KYN36905.1    KQ980419    KYN16086.1    KK107087    QOIP01000001    EZA59937.1    RLU26581.1    GECU01034295    JAS73411.1    GL764129    EFZ18383.1    GECZ01024875    GECZ01005633    JAS44894.1    JAS64136.1    GL888115    EGI67150.1    KK852570    KDR21161.1    GECZ01008927    JAS60842.1    NEVH01026136    PNF14511.1    GECZ01013609    JAS56160.1    PNF14510.1    GFTR01005291    JAW11135.1    KQ982215    KYQ58923.1    GBHO01034315    GBHO01027870    GBHO01020873    GBHO01020869    GBHO01004113    GBHO01004108    GBRD01011289    GBRD01011287    GBRD01011286    GBRD01007091    GBRD01007089    GBRD01007088    GBRD01007087    JAG09289.1    JAG15734.1    JAG22731.1    JAG22735.1    JAG39491.1    JAG39496.1    JAG54535.1    PNF14508.1    GDHC01015152    JAQ03477.1    GDKW01003447    JAI53148.1    NNAY01002718    OXU20698.1    GBHO01044710    GBHO01027874    GBHO01020874    GBHO01020872    GBHO01004115    GBHO01004109    GBRD01011290    GBRD01011288    GBRD01011285    GBRD01011284    GBRD01011283    GBRD01007092    GBRD01007090    JAF98893.1    JAG15730.1    JAG22730.1    JAG22732.1    JAG39489.1    JAG39495.1    JAG54534.1    ACPB03005610    ACPB03005611    ACPB03005612    AK417619    BAN20834.1    GEBQ01029762    JAT10215.1    GEBQ01001767    JAT38210.1    GEBQ01016283    JAT23694.1    GEBQ01022737    JAT17240.1    DS235044    EEB10917.1    JH431901    KQ435719    KOX78915.1    GEZM01103147    JAV51521.1    GEZM01103148    JAV51520.1    GEZM01103150    JAV51515.1    GEZM01103146    JAV51523.1    GDAI01001716    JAI15887.1    GDIP01172444    JAJ50958.1    GDIQ01246160    GDIP01075068    JAK05565.1    JAM28647.1    GGMS01006092    MBY75295.1    GALX01002724    JAB65742.1    GDIP01254512    JAI68889.1    KB631695    ERL85421.1    LJIJ01000040    ODN04580.1    CAQQ02114398    CAQQ02114399    GANO01003639    JAB56232.1    QCYY01000837    ROT82371.1    CH477775    EAT36342.1    EJY57926.1    KQ971343    EFA03335.2    GFXV01000690    MBW12495.1    GFDF01002401    JAV11683.1    ABLF02016309    JXUM01058686    JXUM01058687    KQ562014    KXJ76904.1    LNIX01000002    OXA60529.1    GEIB01000462    JAR87423.1    KA647541    AFP62170.1    GDIP01042913    JAM60802.1    AY326254    AAP88023.1    AJWK01022457    AJWK01022458    GGLE01005026    MBY09152.1    APGK01051522    APGK01051523    APGK01051524    KB741190    ENN73039.1    GAPW01001056    JAC12542.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000218220    UP000242457    UP000076502    + More
UP000005203    UP000036403    UP000053825    UP000008237    UP000078540    UP000005205    UP000000311    UP000078542    UP000078541    UP000078492    UP000053097    UP000279307    UP000007755    UP000027135    UP000235965    UP000075809    UP000002358    UP000215335    UP000015103    UP000009046    UP000192223    UP000053105    UP000030742    UP000094527    UP000015102    UP000283509    UP000008820    UP000007266    UP000007819    UP000069940    UP000249989    UP000198287    UP000095301    UP000092461    UP000019118    UP000079169   

PRIDE

H9J1H5   

Pfam

PF01467   CTP_transf_like

Interpro

IPR004821   Cyt_trans-like        + More
IPR014729   Rossmann-like_a/b/a_fold       
IPR041723   CCT       

Gene 3D

3.40.50.620    

CDD

cd02174  CCT

ProteinModelPortal

H9J1H5   S4NTZ9   A0A212EZV9   A0A3S2LAW0   A0A2A4JEB3   A0A2A4JDW1   + More
A0A2A4JEB2   A0A2H1V8G4   A0A2A4JCQ5   A0A310S452   A0A2A3ESH3   A0A154P450   A0A0C9R1A8   A0A087ZRD5   A0A0J7KJR2   A0A0L7QTZ0   E2C280   A0A195BYP8   A0A158NCQ4   E2A246   A0A1B6ISC1   A0A1B6J368   A0A195CH29   A0A1B6JMT2   A0A195F8F7   A0A195DTA9   A0A026WV93   A0A1B6HFM5   E9ILN7   A0A1B6GNX7   F4WF99   A0A067RBE5   A0A1B6GEG9   A0A2J7PDU8   A0A1B6G161   A0A2J7PDU6   A0A224XF80   A0A151XEW7   A0A0A9XZN8   K7IQ27   A0A2J7PDV4   A0A146L8P4   A0A0P4VKW1   A0A232EQS7   A0A0A9ZCF6   T1H8S6   R4WDL0   A0A1B6KFL6   A0A1B6MQK5   A0A1B6LJB2   A0A1B6L0Q5   E0VC11   A0A1W4X382   A0A1W4XE17   A0A1W4X3C1   T1J712   A0A1W4XDS5   A0A0M9A7N4   A0A1Y1JTS0   A0A1Y1JUP4   A0A1Y1JVT0   A0A1Y1JRF4   A0A0K8TNB8   A0A0P5CQK5   A0A0P5HT62   A0A2S2QC24   V5GVM5   A0A0P4WPB8   U4U4B4   A0A1D2NH47   T1GG87   U5ERQ0   A0A3R7SYX4   Q16PN8   J9EB30   A0A1S4FU28   D6WMA2   A0A2H8TEJ2   A0A1L8DYY7   J9JN73   A0A182GET3   A0A226ESQ0   A0A1I8MXN5   A0A147B9J9   T1PFM1   A0A0P5ZJX3   Q7YZF4   A0A1B0EZH6   A0A2R5LI04   N6SZ51   A0A1I8MXN1   A0A023EUC5   A0A3Q0J4M6  

PDB

4MVD     E-value=4.88352e-82,     Score=775

KEGG

101741049    K00968 choline-phosphate cytidylyltransferase [EC:2.7.7.15] | (RefSeq) choline-phosphate cytidylyltr

PATHWAY

00440    Phosphonate and phosphinate metabolism - Bombyx mori (domestic silkworm)
00564    Glycerophospholipid metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0003824   GO:0009058   GO:0016779   GO:0016021   GO:0004105   GO:0031210   GO:0016740   GO:0006468   GO:0005524   GO:0005739   GO:0016776   GO:0006811   GO:0016020   GO:0016876   GO:0043039  

Length:

342

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0377800000000001

Exp number, first 60 AAs:

0.0182

Total prob of N-in:

0.02321

outside

1  -  342

 

 

Pi

246.524316

Theta

165.041701

Tajima's D

1.685924

CLR

0.603598

CSRT

0.830058497075146

Interpretation

Uncertain